Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is lipG
Identifier: 41410216
GI number: 41410216
Start: 4588793
End: 4589701
Strand: Reverse
Name: lipG
Synonym: MAP4118c
Alternate gene names: NA
Gene position: 4589701-4588793 (Counterclockwise)
Preceding gene: 41410217
Following gene: 41410215
Centisome position: 95.03
GC content: 69.97
Gene sequence:
>909_bases ATGGTGCAGGTCCGCACGGGGCACGCCATATCAGGCGACCTGAAGCTCTACTACGAGGACATGGGCGACATCGACGACCC GCCGGTGCTGCTGATCATGGGGCTGGGCGCCCAGCTGCTGCTGTGGCGGACCGCGTTCTGCGAGAAGCTGGTGGGCCGCG GGCTGCGGGTGATCCGGTACGACAACCGCGACGTGGGGCTGTCCAGCAAGACCGAGCACCGCAGCTCGGGGCAACCGCTG GTCACCCGGCTGCTGCGGTCCTGGCTGGGCCTGCCCAGCCAATCGGCGTACCGGCTCGAGGACATGGCCGACGACGCCGC GGCCGTGCTGGACCATTTGGGCATCGACGACGCCCACATCGTGGGGGCGTCGATGGGCGGCATGATCGCCCAGATTTTCG CCGCCCGGTTCCGCCAGCGCACCAAAACCCTGGCGGTCATCTTCTCCAGCAACAATTCCGCGCTGCTGCCGCCGCCGGCG CCGCGGGCGCTGCTGGCGCTGCTGAAGGGGCCGCCGCCCGACTCGCCGCGCGAGGTGATCATCGACAACGCGGTGCGGGT CGGCAGGATCATCGGCAGCCCGCGCTACCGGGTGCCCGAGGAGCAGGCGCGCGCCGAGGCCGCCGAGGGCTACGACCGCA ACTACTACCCACAGGGCGTCGCCCGACACTTTTCCGCCGTGCTGGGCAGCGGCAGCCTGCGCCGCTACAACCGTCGGACC ACCGCGCCCACCGTGGTGATCCACGGCCGGGCGGACAAGCTGATGCGGCCGTTCGGGGGCCGCGCGGTGGCCCGCGCCAT CGACGGCGCCCGATTGGTGTTATTCGACGGGATGGGTCATGATCTGCCACAGCAGTTGTGGGATCAGGTGATCGGCGTGC TGGCGAACAACTTCGCCAAGGCCAGCTGA
Upstream 100 bases:
>100_bases GGATCCTCAACTGACCGGGTATTTCGCCAACTTCATGGTCGAGGTCAGCCGCGAGCACTCCTCCGAGTTCGAATCCGACG TCGAGGTCTAGGGGCCTTCG
Downstream 100 bases:
>100_bases GCCAAAAACTCTCGGTAGAAACGGTTCCCCGCAATTTTCAGTCCAAGTCACAGAGTTGTACGGTTGTCGAAGGAGGGTGG GTGTAACCGATGGCCAAGCT
Product: LipG
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Hydrolase; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase; Carboxylesterase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase Fold Protein EstB; Hydrolase Protein; Alpha/Beta Hydrolase Superfamily Protein; Alpha/Beta Fold Superfamily Hydrolase; Streptothricin Acetyl-Transferase; Alpha/Beta Hydrolase Fold Containing Protein; Lipase/Esterase LipG; Hydrolase Alpha/Beta Fold Family Protein; Carboxyl Esterase A/B Hydrolase; Lipase/Esterase; Prolyl Aminopeptidase; Hydrolase EstB; Glycosyltransferase/Hydrolase; Alpha/Beta Hydrolase Family Protein; Exported Hydrolase; Carboxyl Esterase; Streptothricin-Acetyl-Transferase; Alpha/Beta Hydrolase Fold-Domain-Containing Protein; Streptothricin-Acteyl-Transferase; Alpha/Beta Family Hydrolase; Acetyltransferase; Alpha/Beta Superfamily Hydrolase/Acyltransferase
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MVQVRTGHAISGDLKLYYEDMGDIDDPPVLLIMGLGAQLLLWRTAFCEKLVGRGLRVIRYDNRDVGLSSKTEHRSSGQPL VTRLLRSWLGLPSQSAYRLEDMADDAAAVLDHLGIDDAHIVGASMGGMIAQIFAARFRQRTKTLAVIFSSNNSALLPPPA PRALLALLKGPPPDSPREVIIDNAVRVGRIIGSPRYRVPEEQARAEAAEGYDRNYYPQGVARHFSAVLGSGSLRRYNRRT TAPTVVIHGRADKLMRPFGGRAVARAIDGARLVLFDGMGHDLPQQLWDQVIGVLANNFAKAS
Sequences:
>Translated_302_residues MVQVRTGHAISGDLKLYYEDMGDIDDPPVLLIMGLGAQLLLWRTAFCEKLVGRGLRVIRYDNRDVGLSSKTEHRSSGQPL VTRLLRSWLGLPSQSAYRLEDMADDAAAVLDHLGIDDAHIVGASMGGMIAQIFAARFRQRTKTLAVIFSSNNSALLPPPA PRALLALLKGPPPDSPREVIIDNAVRVGRIIGSPRYRVPEEQARAEAAEGYDRNYYPQGVARHFSAVLGSGSLRRYNRRT TAPTVVIHGRADKLMRPFGGRAVARAIDGARLVLFDGMGHDLPQQLWDQVIGVLANNFAKAS >Mature_302_residues MVQVRTGHAISGDLKLYYEDMGDIDDPPVLLIMGLGAQLLLWRTAFCEKLVGRGLRVIRYDNRDVGLSSKTEHRSSGQPL VTRLLRSWLGLPSQSAYRLEDMADDAAAVLDHLGIDDAHIVGASMGGMIAQIFAARFRQRTKTLAVIFSSNNSALLPPPA PRALLALLKGPPPDSPREVIIDNAVRVGRIIGSPRYRVPEEQARAEAAEGYDRNYYPQGVARHFSAVLGSGSLRRYNRRT TAPTVVIHGRADKLMRPFGGRAVARAIDGARLVLFDGMGHDLPQQLWDQVIGVLANNFAKAS
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33054; Mature: 33054
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQVRTGHAISGDLKLYYEDMGDIDDPPVLLIMGLGAQLLLWRTAFCEKLVGRGLRVIRY CEEEECCCEECCCCEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCEEEEEE DNRDVGLSSKTEHRSSGQPLVTRLLRSWLGLPSQSAYRLEDMADDAAAVLDHLGIDDAHI CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHH VGASMGGMIAQIFAARFRQRTKTLAVIFSSNNSALLPPPAPRALLALLKGPPPDSPREVI HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEECCCCCHHHHHHHHCCCCCCCCHHHH IDNAVRVGRIIGSPRYRVPEEQARAEAAEGYDRNYYPQGVARHFSAVLGSGSLRRYNRRT HHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCC TAPTVVIHGRADKLMRPFGGRAVARAIDGARLVLFDGMGHDLPQQLWDQVIGVLANNFAK CCCEEEEECCHHHHHCCCCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHC AS CC >Mature Secondary Structure MVQVRTGHAISGDLKLYYEDMGDIDDPPVLLIMGLGAQLLLWRTAFCEKLVGRGLRVIRY CEEEECCCEECCCCEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCEEEEEE DNRDVGLSSKTEHRSSGQPLVTRLLRSWLGLPSQSAYRLEDMADDAAAVLDHLGIDDAHI CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHH VGASMGGMIAQIFAARFRQRTKTLAVIFSSNNSALLPPPAPRALLALLKGPPPDSPREVI HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEECCCCCHHHHHHHHCCCCCCCCHHHH IDNAVRVGRIIGSPRYRVPEEQARAEAAEGYDRNYYPQGVARHFSAVLGSGSLRRYNRRT HHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCC TAPTVVIHGRADKLMRPFGGRAVARAIDGARLVLFDGMGHDLPQQLWDQVIGVLANNFAK CCCEEEEECCHHHHHCCCCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHC AS CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA