Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41410206

Identifier: 41410206

GI number: 41410206

Start: 4580945

End: 4581373

Strand: Direct

Name: 41410206

Synonym: MAP4108

Alternate gene names: NA

Gene position: 4580945-4581373 (Clockwise)

Preceding gene: 41410205

Following gene: 41410207

Centisome position: 94.85

GC content: 66.43

Gene sequence:

>429_bases
ATGCCACTGCGTGAGTTCAGCTCCGTGAAGGTGGGTGACCTGCTTCCGGAGAAGGTCTACCCGCTGACCCGTCAGGATCT
GGTGAATTACGCGGGGGTGTCCGGCGACCTGAACCCGATCCACTGGGACGACGAGATGGCCAAGGTCGTCGGCCTGGACA
CCGCGATCGCGCACGGCATGCTGACCATGGGCATCGGCGGGGGCTACGTCACCGCGTGGATCGGCGACCCGGGCGCGGTC
ACCGAATACAACGTGCGGTTCACCGCCGTGGTGCCGGTGCCCAACGACGGCAAGGGCGCCGAGCTGGTGTTCAACGGCAG
GGTGAAGTCGGCGGACCCGGAGACCAAGTCGGTCACCATCGCGCTGACGGCCACCACGGGCGGCAAGAAGATCTTCGGTA
GGGCCATCGCGTCCGCGATCCTTGCGTAG

Upstream 100 bases:

>100_bases
ACCAAGAATGTCATCACCAACGAGGCCGGTGACGTCGTGCAAGAGACCTACACGACCCTGGCGGGCCGTGCCGGCGAGGA
TGGAGAAGAGGGATTTACTG

Downstream 100 bases:

>100_bases
GCCATGGCGCTCAAAACAGACATCCGGGGAATGATCTGGCGCTATCCCGACTACTTCGTTGTGGGGCGCGAACAGCTGCG
TCAGTTCGCCCTGTCCGTCA

Product: (3R)-hydroxyacyl-ACP dehydratase subunit HadB

Products: NA

Alternate protein names: Dehydratase; MaoC Domain-Containing Protein Dehydratase; MaoC-Like Dehydratase; Acyl Dehydratase; (3R)-Hydroxyacyl-ACP Dehydratase Subunit HadB; MaoC Like Domain-Containing Protein; MaoC Family Protein; MaoC Domain-Containing Protein; Maoc-Like Dehydratase; MaoC-Like Domain-Containing Protein; Dehydrogenase; R_hydratase_like -Hydratase

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MPLREFSSVKVGDLLPEKVYPLTRQDLVNYAGVSGDLNPIHWDDEMAKVVGLDTAIAHGMLTMGIGGGYVTAWIGDPGAV
TEYNVRFTAVVPVPNDGKGAELVFNGRVKSADPETKSVTIALTATTGGKKIFGRAIASAILA

Sequences:

>Translated_142_residues
MPLREFSSVKVGDLLPEKVYPLTRQDLVNYAGVSGDLNPIHWDDEMAKVVGLDTAIAHGMLTMGIGGGYVTAWIGDPGAV
TEYNVRFTAVVPVPNDGKGAELVFNGRVKSADPETKSVTIALTATTGGKKIFGRAIASAILA
>Mature_141_residues
PLREFSSVKVGDLLPEKVYPLTRQDLVNYAGVSGDLNPIHWDDEMAKVVGLDTAIAHGMLTMGIGGGYVTAWIGDPGAVT
EYNVRFTAVVPVPNDGKGAELVFNGRVKSADPETKSVTIALTATTGGKKIFGRAIASAILA

Specific function: Unknown

COG id: COG2030

COG function: function code I; Acyl dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14930; Mature: 14799

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLREFSSVKVGDLLPEKVYPLTRQDLVNYAGVSGDLNPIHWDDEMAKVVGLDTAIAHGM
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHCCE
LTMGIGGGYVTAWIGDPGAVTEYNVRFTAVVPVPNDGKGAELVFNGRVKSADPETKSVTI
EEEECCCCEEEEEECCCCCCEEEEEEEEEEEECCCCCCCCEEEECCEECCCCCCCCEEEE
ALTATTGGKKIFGRAIASAILA
EEEECCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
PLREFSSVKVGDLLPEKVYPLTRQDLVNYAGVSGDLNPIHWDDEMAKVVGLDTAIAHGM
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHCCE
LTMGIGGGYVTAWIGDPGAVTEYNVRFTAVVPVPNDGKGAELVFNGRVKSADPETKSVTI
EEEECCCCEEEEEECCCCCCEEEEEEEEEEEECCCCCCCCEEEECCEECCCCCCCCEEEE
ALTATTGGKKIFGRAIASAILA
EEEECCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA