Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41410206
Identifier: 41410206
GI number: 41410206
Start: 4580945
End: 4581373
Strand: Direct
Name: 41410206
Synonym: MAP4108
Alternate gene names: NA
Gene position: 4580945-4581373 (Clockwise)
Preceding gene: 41410205
Following gene: 41410207
Centisome position: 94.85
GC content: 66.43
Gene sequence:
>429_bases ATGCCACTGCGTGAGTTCAGCTCCGTGAAGGTGGGTGACCTGCTTCCGGAGAAGGTCTACCCGCTGACCCGTCAGGATCT GGTGAATTACGCGGGGGTGTCCGGCGACCTGAACCCGATCCACTGGGACGACGAGATGGCCAAGGTCGTCGGCCTGGACA CCGCGATCGCGCACGGCATGCTGACCATGGGCATCGGCGGGGGCTACGTCACCGCGTGGATCGGCGACCCGGGCGCGGTC ACCGAATACAACGTGCGGTTCACCGCCGTGGTGCCGGTGCCCAACGACGGCAAGGGCGCCGAGCTGGTGTTCAACGGCAG GGTGAAGTCGGCGGACCCGGAGACCAAGTCGGTCACCATCGCGCTGACGGCCACCACGGGCGGCAAGAAGATCTTCGGTA GGGCCATCGCGTCCGCGATCCTTGCGTAG
Upstream 100 bases:
>100_bases ACCAAGAATGTCATCACCAACGAGGCCGGTGACGTCGTGCAAGAGACCTACACGACCCTGGCGGGCCGTGCCGGCGAGGA TGGAGAAGAGGGATTTACTG
Downstream 100 bases:
>100_bases GCCATGGCGCTCAAAACAGACATCCGGGGAATGATCTGGCGCTATCCCGACTACTTCGTTGTGGGGCGCGAACAGCTGCG TCAGTTCGCCCTGTCCGTCA
Product: (3R)-hydroxyacyl-ACP dehydratase subunit HadB
Products: NA
Alternate protein names: Dehydratase; MaoC Domain-Containing Protein Dehydratase; MaoC-Like Dehydratase; Acyl Dehydratase; (3R)-Hydroxyacyl-ACP Dehydratase Subunit HadB; MaoC Like Domain-Containing Protein; MaoC Family Protein; MaoC Domain-Containing Protein; Maoc-Like Dehydratase; MaoC-Like Domain-Containing Protein; Dehydrogenase; R_hydratase_like -Hydratase
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MPLREFSSVKVGDLLPEKVYPLTRQDLVNYAGVSGDLNPIHWDDEMAKVVGLDTAIAHGMLTMGIGGGYVTAWIGDPGAV TEYNVRFTAVVPVPNDGKGAELVFNGRVKSADPETKSVTIALTATTGGKKIFGRAIASAILA
Sequences:
>Translated_142_residues MPLREFSSVKVGDLLPEKVYPLTRQDLVNYAGVSGDLNPIHWDDEMAKVVGLDTAIAHGMLTMGIGGGYVTAWIGDPGAV TEYNVRFTAVVPVPNDGKGAELVFNGRVKSADPETKSVTIALTATTGGKKIFGRAIASAILA >Mature_141_residues PLREFSSVKVGDLLPEKVYPLTRQDLVNYAGVSGDLNPIHWDDEMAKVVGLDTAIAHGMLTMGIGGGYVTAWIGDPGAVT EYNVRFTAVVPVPNDGKGAELVFNGRVKSADPETKSVTIALTATTGGKKIFGRAIASAILA
Specific function: Unknown
COG id: COG2030
COG function: function code I; Acyl dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14930; Mature: 14799
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLREFSSVKVGDLLPEKVYPLTRQDLVNYAGVSGDLNPIHWDDEMAKVVGLDTAIAHGM CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHCCE LTMGIGGGYVTAWIGDPGAVTEYNVRFTAVVPVPNDGKGAELVFNGRVKSADPETKSVTI EEEECCCCEEEEEECCCCCCEEEEEEEEEEEECCCCCCCCEEEECCEECCCCCCCCEEEE ALTATTGGKKIFGRAIASAILA EEEECCCCHHHHHHHHHHHHCC >Mature Secondary Structure PLREFSSVKVGDLLPEKVYPLTRQDLVNYAGVSGDLNPIHWDDEMAKVVGLDTAIAHGM CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHCCE LTMGIGGGYVTAWIGDPGAVTEYNVRFTAVVPVPNDGKGAELVFNGRVKSADPETKSVTI EEEECCCCEEEEEECCCCCCEEEEEEEEEEEECCCCCCCCEEEECCEECCCCCCCCEEEE ALTATTGGKKIFGRAIASAILA EEEECCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA