Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41410201
Identifier: 41410201
GI number: 41410201
Start: 4577986
End: 4578828
Strand: Reverse
Name: 41410201
Synonym: MAP4103c
Alternate gene names: NA
Gene position: 4578828-4577986 (Counterclockwise)
Preceding gene: 41410202
Following gene: 41410200
Centisome position: 94.8
GC content: 68.45
Gene sequence:
>843_bases GTGGATTCCATGGGTTGGATCCAGGACAGCTGGCATGGGGTCACGCACGTCGGGTCCAGCACCTGGATCGCGTGGGCAGC ATGGGCGGCGATCGCGCTCGCCGTCATCACGCTGATCTTCACCAACAGCCAGATCGCCCGCAATCGCCGGGCGGCCGCCG AGCAGACCCGCCCGCACGTCGCGATGTTCATGGAGCCGCACCCGGCCGACTGGCACGTCATCGAACTGGTGGTCCGCAAC TTCGGCCAGACCGCTGCCTACGACATCGAATTCTCCTTCGACAATCCGCCCACCGTGGCCGAATACGAGAGCGCCACCGA CGGCTACGCCGACGTCGTCGAACTGCGGCTGCCCCGCCAGCTGCCGGTGCTGGCGCCCGGCCAGGAGTGGCGCACGGTGT GGGACTCCGCGCTGGACCGCGCCGAGATCGGCAGCGGCATCGAATCCCGCTTCACCGGCACGGTCACCTACTACGACCGG CCCGCGCCGGCCGGCGGCCGGCGGTTCTGGCAGCGGGAACGCACGCCGCTGCACACCGACGTCGTGCTGGACTGGGACGC CCTGCCGCCCGTGCAGCGCATCGAGTTGATGACCACCCACGACCTGGCCAAGCGGGAGAAGGAGAAGCTGGAGCTGCTGC GCGGGCTGCTCACCTACTTCCACTACGCCAGCAAGGAAACCCGTCCCGAGGTGTTCCGCAGCGAGATCGAACGGATCAAC GCCGCGGTCCGGGAAACCCAAGACAGGTGGCGCAGCCGCCAACTCGACGAACCCACCGATGTCAGCCTGCGCTGGAGCAA CGCCGAAGACGACCTGGGCAAGCACCACAGCCAGCCGGCGTGA
Upstream 100 bases:
>100_bases TCCGACCTTGACCAATGGCGGATGTTGATGGGCGGCTGAGCCGTCCGGTGATCGCTCGATCGTGATCACCCCGCGGCCGG CCCTGTGATATAAGCGGAGG
Downstream 100 bases:
>100_bases CGGCAAGGAGCAACTCATGAGCGGCCCGGTCCACTACAGCGCCAAGGGCCCCGTCGCCGTCATCAGGATGGACGACGGCA AGGTCAACGCGCTGGGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MDSMGWIQDSWHGVTHVGSSTWIAWAAWAAIALAVITLIFTNSQIARNRRAAAEQTRPHVAMFMEPHPADWHVIELVVRN FGQTAAYDIEFSFDNPPTVAEYESATDGYADVVELRLPRQLPVLAPGQEWRTVWDSALDRAEIGSGIESRFTGTVTYYDR PAPAGGRRFWQRERTPLHTDVVLDWDALPPVQRIELMTTHDLAKREKEKLELLRGLLTYFHYASKETRPEVFRSEIERIN AAVRETQDRWRSRQLDEPTDVSLRWSNAEDDLGKHHSQPA
Sequences:
>Translated_280_residues MDSMGWIQDSWHGVTHVGSSTWIAWAAWAAIALAVITLIFTNSQIARNRRAAAEQTRPHVAMFMEPHPADWHVIELVVRN FGQTAAYDIEFSFDNPPTVAEYESATDGYADVVELRLPRQLPVLAPGQEWRTVWDSALDRAEIGSGIESRFTGTVTYYDR PAPAGGRRFWQRERTPLHTDVVLDWDALPPVQRIELMTTHDLAKREKEKLELLRGLLTYFHYASKETRPEVFRSEIERIN AAVRETQDRWRSRQLDEPTDVSLRWSNAEDDLGKHHSQPA >Mature_280_residues MDSMGWIQDSWHGVTHVGSSTWIAWAAWAAIALAVITLIFTNSQIARNRRAAAEQTRPHVAMFMEPHPADWHVIELVVRN FGQTAAYDIEFSFDNPPTVAEYESATDGYADVVELRLPRQLPVLAPGQEWRTVWDSALDRAEIGSGIESRFTGTVTYYDR PAPAGGRRFWQRERTPLHTDVVLDWDALPPVQRIELMTTHDLAKREKEKLELLRGLLTYFHYASKETRPEVFRSEIERIN AAVRETQDRWRSRQLDEPTDVSLRWSNAEDDLGKHHSQPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32144; Mature: 32144
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSMGWIQDSWHGVTHVGSSTWIAWAAWAAIALAVITLIFTNSQIARNRRAAAEQTRPHV CCCCCCCHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCE AMFMEPHPADWHVIELVVRNFGQTAAYDIEFSFDNPPTVAEYESATDGYADVVELRLPRQ EEEECCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCC LPVLAPGQEWRTVWDSALDRAEIGSGIESRFTGTVTYYDRPAPAGGRRFWQRERTPLHTD CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCEEEEEECCCCCCCHHHHHHHCCCCCCEE VVLDWDALPPVQRIELMTTHDLAKREKEKLELLRGLLTYFHYASKETRPEVFRSEIERIN EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH AAVRETQDRWRSRQLDEPTDVSLRWSNAEDDLGKHHSQPA HHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHCCCCCC >Mature Secondary Structure MDSMGWIQDSWHGVTHVGSSTWIAWAAWAAIALAVITLIFTNSQIARNRRAAAEQTRPHV CCCCCCCHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCE AMFMEPHPADWHVIELVVRNFGQTAAYDIEFSFDNPPTVAEYESATDGYADVVELRLPRQ EEEECCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCC LPVLAPGQEWRTVWDSALDRAEIGSGIESRFTGTVTYYDRPAPAGGRRFWQRERTPLHTD CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCEEEEEECCCCCCCHHHHHHHCCCCCCEE VVLDWDALPPVQRIELMTTHDLAKREKEKLELLRGLLTYFHYASKETRPEVFRSEIERIN EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH AAVRETQDRWRSRQLDEPTDVSLRWSNAEDDLGKHHSQPA HHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA