Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
---|---|
Accession | NC_002944 |
Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is mce2
Identifier: 41410182
GI number: 41410182
Start: 4553426
End: 4554568
Strand: Direct
Name: mce2
Synonym: MAP4084
Alternate gene names: NA
Gene position: 4553426-4554568 (Clockwise)
Preceding gene: 41410181
Following gene: 41410183
Centisome position: 94.28
GC content: 68.07
Gene sequence:
>1143_bases GTGCGCTGGTTCTGGCCTTGGTATACCTGCAATTTCGCGGGGACTTCACCCCCCAAGACCAAGCTCACCATGGTCGCCAC CCGGGCCGGCCTGGTGATGGAGACGGGATCCAAGGTCACCTACAACGGCGTCGCGATCGGCCGGGTGGCCGACATCTCGG AGATCGAGCGCGACGGCGCCCCCGCGGCCAAACTGGTGCTGGATGTGGATCCGCGCTATGTCAACCTGATTCCGGCGAAC GTGGTGGCCACCATCGAGGCGGCCACGCTGTTCGGCAACAAGTACGTGTCGTTGAGCGCCCCGGAAAACCCGTCGCGGCA GCGGATCTCGCCCCGCGACGTGATCGACGCGCGGTCGGTGACCACCGAATTCAACACCCTGTTCGAGACGGTCACCTCGA TCGCGGAGAAGGTGAGCCCGATCGAGCTCAACGCGACGCTGTCCGCGCTGGCGCAGGCACTGGACGGGCTGGGCGGCAAG TTCGGCGAATCCATCGTCAACGGCAATCAGATTCTGGCGCAGCTGAATCCGCGAATGCCGCAGATCCGCTACGACGTGCG CCGCCTGGCCGACCTGGCCGGCGCGTACACCAAGGCCGCACCCGACCTGTTGGACTTCCTGTCCAACGCGGTGACCACCG CGCGGACGCTGACCCGGCAACAGGGCGACCTGGACGCCGCGCTGCTGGCGGCCGTCGGCGTGGGCCATGAGGGCGAGGAC ATCTTCGCCCGCGGCGGACCGTACCTGGCGCGCGGGGCCGCCGACCTGGTGCCCACCGCCGAGCTGCTCGACACCTACAG CCCCGAACTGTTCTGCATGATCCGCAATTTCCACGACGCCGCCCCTGAGGTCGCCAAAGCGGCCGGCGGCAACGGCTATT CGCTGGCGGCGGCCGGATCGATCGTCGGCGCGCCGAATCCCTATGTGTACCCGGACAACCTGCCGCGGGTGAACGCGCAC GGCGGCCCGGGCGGGCGGCCCGGCTGCTGGCAGAAGATCACCCGGGACCTGTGGCCCGCGCCGTATCTGGTGATGGACAC CGGCGCCAGCCTGGCTCCTTACAACCACCTCGAGATCGGTCAGCCGCTGGCCACCGAATTCGTCTGGGGCCGCCAGTACG GGGAGAACACGATCAACCCATGA
Upstream 100 bases:
>100_bases GAACTTCAACCTGACGGTGTGAGCGCGATGGCGACACCGGTGCCGCAGCGGGGCCGACGCGCCTGGGTGTACGTCGAGGG GGTGTTCCTGCTGCTGGTCT
Downstream 100 bases:
>100_bases GAATCACCGGTACCGCAGTCAAACTCGTCGTCTTCTGGTCCGTGCTGGCGATGTTCACAGTGATGATCATCGTCGTGTTC GGCCAGGTCCGATTCGATCG
Product: Mce2
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family A; Virulence Factor; MCE-Family Protein; Mce Family A; Mammalian Cell Entry Related Domain-Containing Protein; MCE Family Protein; Mce-Related Protein; Cell Invasion Protein; MCE-Family; Virulence Factor MCE-Like Protein
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MRWFWPWYTCNFAGTSPPKTKLTMVATRAGLVMETGSKVTYNGVAIGRVADISEIERDGAPAAKLVLDVDPRYVNLIPAN VVATIEAATLFGNKYVSLSAPENPSRQRISPRDVIDARSVTTEFNTLFETVTSIAEKVSPIELNATLSALAQALDGLGGK FGESIVNGNQILAQLNPRMPQIRYDVRRLADLAGAYTKAAPDLLDFLSNAVTTARTLTRQQGDLDAALLAAVGVGHEGED IFARGGPYLARGAADLVPTAELLDTYSPELFCMIRNFHDAAPEVAKAAGGNGYSLAAAGSIVGAPNPYVYPDNLPRVNAH GGPGGRPGCWQKITRDLWPAPYLVMDTGASLAPYNHLEIGQPLATEFVWGRQYGENTINP
Sequences:
>Translated_380_residues MRWFWPWYTCNFAGTSPPKTKLTMVATRAGLVMETGSKVTYNGVAIGRVADISEIERDGAPAAKLVLDVDPRYVNLIPAN VVATIEAATLFGNKYVSLSAPENPSRQRISPRDVIDARSVTTEFNTLFETVTSIAEKVSPIELNATLSALAQALDGLGGK FGESIVNGNQILAQLNPRMPQIRYDVRRLADLAGAYTKAAPDLLDFLSNAVTTARTLTRQQGDLDAALLAAVGVGHEGED IFARGGPYLARGAADLVPTAELLDTYSPELFCMIRNFHDAAPEVAKAAGGNGYSLAAAGSIVGAPNPYVYPDNLPRVNAH GGPGGRPGCWQKITRDLWPAPYLVMDTGASLAPYNHLEIGQPLATEFVWGRQYGENTINP >Mature_380_residues MRWFWPWYTCNFAGTSPPKTKLTMVATRAGLVMETGSKVTYNGVAIGRVADISEIERDGAPAAKLVLDVDPRYVNLIPAN VVATIEAATLFGNKYVSLSAPENPSRQRISPRDVIDARSVTTEFNTLFETVTSIAEKVSPIELNATLSALAQALDGLGGK FGESIVNGNQILAQLNPRMPQIRYDVRRLADLAGAYTKAAPDLLDFLSNAVTTARTLTRQQGDLDAALLAAVGVGHEGED IFARGGPYLARGAADLVPTAELLDTYSPELFCMIRNFHDAAPEVAKAAGGNGYSLAAAGSIVGAPNPYVYPDNLPRVNAH GGPGGRPGCWQKITRDLWPAPYLVMDTGASLAPYNHLEIGQPLATEFVWGRQYGENTINP
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40700; Mature: 40700
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWFWPWYTCNFAGTSPPKTKLTMVATRAGLVMETGSKVTYNGVAIGRVADISEIERDGA CCEEECEEEEECCCCCCCCCEEEEEEECCCEEEECCCEEEECCEEECCHHHHHHHHHCCC PAAKLVLDVDPRYVNLIPANVVATIEAATLFGNKYVSLSAPENPSRQRISPRDVIDARSV CCEEEEEECCCCEEEEECCHHHHHHHHHHEECCEEEEECCCCCCCCCCCCHHHHHHHHHH TTEFNTLFETVTSIAEKVSPIELNATLSALAQALDGLGGKFGESIVNGNQILAQLNPRMP HHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCCCC QIRYDVRRLADLAGAYTKAAPDLLDFLSNAVTTARTLTRQQGDLDAALLAAVGVGHEGED HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC IFARGGPYLARGAADLVPTAELLDTYSPELFCMIRNFHDAAPEVAKAAGGNGYSLAAAGS EEECCCCCHHCCCHHHCCHHHHHHCCCCCEEEEEHHHHHCCHHHHHHCCCCCEEEEECCC IVGAPNPYVYPDNLPRVNAHGGPGGRPGCWQKITRDLWPAPYLVMDTGASLAPYNHLEIG CCCCCCCEECCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC QPLATEFVWGRQYGENTINP CHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRWFWPWYTCNFAGTSPPKTKLTMVATRAGLVMETGSKVTYNGVAIGRVADISEIERDGA CCEEECEEEEECCCCCCCCCEEEEEEECCCEEEECCCEEEECCEEECCHHHHHHHHHCCC PAAKLVLDVDPRYVNLIPANVVATIEAATLFGNKYVSLSAPENPSRQRISPRDVIDARSV CCEEEEEECCCCEEEEECCHHHHHHHHHHEECCEEEEECCCCCCCCCCCCHHHHHHHHHH TTEFNTLFETVTSIAEKVSPIELNATLSALAQALDGLGGKFGESIVNGNQILAQLNPRMP HHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCCCC QIRYDVRRLADLAGAYTKAAPDLLDFLSNAVTTARTLTRQQGDLDAALLAAVGVGHEGED HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC IFARGGPYLARGAADLVPTAELLDTYSPELFCMIRNFHDAAPEVAKAAGGNGYSLAAAGS EEECCCCCHHCCCHHHCCHHHHHHCCCCCEEEEEHHHHHCCHHHHHHCCCCCEEEEECCC IVGAPNPYVYPDNLPRVNAHGGPGGRPGCWQKITRDLWPAPYLVMDTGASLAPYNHLEIG CCCCCCCEECCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC QPLATEFVWGRQYGENTINP CHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA