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The map label for this gene is yrbE [C]

Identifier: 41410180

GI number: 41410180

Start: 4551670

End: 4552467

Strand: Direct

Name: yrbE [C]

Synonym: MAP4082

Alternate gene names: 41410180

Gene position: 4551670-4552467 (Clockwise)

Preceding gene: 41410179

Following gene: 41410181

Centisome position: 94.24

GC content: 68.17

Gene sequence:

>798_bases
ATGAGCAGCCAAGCCGTGATCGCGAACTACCTGCGGGGCCAGATTCAGCCCGGGATAGACGCGGTCGGCGGCTTCTTCAG
GACGTGCGTGCTGACCGGCAAGGCGTTGTTCCGGCGGCCCTTCCAGTGGCGGGAGACCATCGAGCAGGGCTGGTTCATCA
CCAGCGTCTCGCTGCTGCCCACCCTCGCCGTCGCGATCCCGCTCACCGTGCTGATCATCTTCACCCTCAACATCCTGCTG
GCCGAGTTCGGCGCCGCCGACATCTCCGGCGCCGGTGCGGCGTTGGGCGCGGTGACGCAGTTGGGCCCGCTGACCACGGT
GCTGGTGATCGCCGGCGCCGGCTCCACGGCCATCTGCGCCGACCTGGGAGCGCGCACCATCCGCGAGGAGATCGACGCGC
TGGAGGTGCTGGGCATCGACCCGATCCACCGACTGGTGGTGCCCCGGGTGGTCGCCGCGACCATCGTCGCCACCCTGCTC
AACGGTGCGGTGATCACCATCGGCCTGGTCGGCGGATTCGTGTTCGGCGTTTTCATCCAACACATTTCGGCGGGCGCCTA
CGTCGGCACCCTCACCCTGATCACCGGCCTGCCCGAGGTGGTGATCTCGGTGGTGAAGTCCGCCACCTTCGGGACCATCG
CCGGCCTGGTCGGCTGCTATCGCGGGCTGACCACCAAGGGTGGTCCCAAGGGGGTGGGCACCGCCGTCAACGAGACGCTG
GTGTTGTGTGTGATCGCGCTGTTCGCCGTCAACGTGGTGCTGACCACCATCGGCGTGCGGTTCGGGACGGGCCGCTGA

Upstream 100 bases:

>100_bases
CCCAGGCGATCTGCGCCGGCGATGCGGACGAGGCGGGCCGCGGCGCCCGCGAGGTCCTCGAACTCGCCAACGCCACCATG
ATCGGCGCGCTGGAGCGGCG

Downstream 100 bases:

>100_bases
CATGGCGGCGATCTCCGCGCCCGGCGCCCTGCGCGCCCGCTACCCGCGAACCGCGGCCAACCTCGACCGCTACGGCGGCG
GAACCGTCCGAAGGCTTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MSSQAVIANYLRGQIQPGIDAVGGFFRTCVLTGKALFRRPFQWRETIEQGWFITSVSLLPTLAVAIPLTVLIIFTLNILL
AEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGSTAICADLGARTIREEIDALEVLGIDPIHRLVVPRVVAATIVATLL
NGAVITIGLVGGFVFGVFIQHISAGAYVGTLTLITGLPEVVISVVKSATFGTIAGLVGCYRGLTTKGGPKGVGTAVNETL
VLCVIALFAVNVVLTTIGVRFGTGR

Sequences:

>Translated_265_residues
MSSQAVIANYLRGQIQPGIDAVGGFFRTCVLTGKALFRRPFQWRETIEQGWFITSVSLLPTLAVAIPLTVLIIFTLNILL
AEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGSTAICADLGARTIREEIDALEVLGIDPIHRLVVPRVVAATIVATLL
NGAVITIGLVGGFVFGVFIQHISAGAYVGTLTLITGLPEVVISVVKSATFGTIAGLVGCYRGLTTKGGPKGVGTAVNETL
VLCVIALFAVNVVLTTIGVRFGTGR
>Mature_264_residues
SSQAVIANYLRGQIQPGIDAVGGFFRTCVLTGKALFRRPFQWRETIEQGWFITSVSLLPTLAVAIPLTVLIIFTLNILLA
EFGAADISGAGAALGAVTQLGPLTTVLVIAGAGSTAICADLGARTIREEIDALEVLGIDPIHRLVVPRVVAATIVATLLN
GAVITIGLVGGFVFGVFIQHISAGAYVGTLTLITGLPEVVISVVKSATFGTIAGLVGCYRGLTTKGGPKGVGTAVNETLV
LCVIALFAVNVVLTTIGVRFGTGR

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=181, Percent_Identity=24.8618784530387, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 27256; Mature: 27124

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SSQAVIANYLRGQIQPGIDAVGGFFRTCVLTGKALFRRPFQWRETIEQGWFITSVSLLP
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHH
TLAVAIPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGSTAICA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCHHHHH
DLGARTIREEIDALEVLGIDPIHRLVVPRVVAATIVATLLNGAVITIGLVGGFVFGVFIQ
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
HISAGAYVGTLTLITGLPEVVISVVKSATFGTIAGLVGCYRGLTTKGGPKGVGTAVNETL
HHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
VLCVIALFAVNVVLTTIGVRFGTGR
HHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]