Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is menA
Identifier: 41410127
GI number: 41410127
Start: 4490292
End: 4491164
Strand: Reverse
Name: menA
Synonym: MAP4029c
Alternate gene names: 41410127
Gene position: 4491164-4490292 (Counterclockwise)
Preceding gene: 41410131
Following gene: 41410126
Centisome position: 92.99
GC content: 75.03
Gene sequence:
>873_bases GTGGCCAATCTCGGGCAGTGGATCTCCGGTGCGCGGCCGCGCACGTTGCCCAACGCGCTGGCGCCGGTGGTCGCCGGCAC CGGCGCGGCGGCGTGGCTGCACGCCGCGGTGTGGTGGAAGGCGCTGCTGGCGTTGGTCGTGGCGGTCGCGATGACGGTCG GCGTCAACTACGCCAACGACTACTCCGACGGCATCCGCGGCACCGACGACGACCGCGCCGGCCCGGTGCGGCTGGTCGGC TCGCGGCTGGCGGCGCCGCGCGCGGTGCTGGGCGCCGCGATCGTGAGCCTGACCGTCGGGGCGATCGCCGGGCTGGTCCT GGCACTGTCCAGCGCGCCGTGGCTGATCGCGGTGGGGGCGGCGTGCATCGCCGGGGCGTGGCTGTACACCGGCGGGTCGA AACCCTACGGCTACACCGGTTTTGGCGAGGTCGCGGTGTTCGTGTTCTTCGGCCTGGTCGCCGTGCTGGGCACCGAGTAC ACCCAGGCGCTGCGGGTGGACTGGGTGGGCCTGGTGCTGGCGGTGGCGGTCGGGGCGCTGTCGTCGTCGGTGCTGGTGGC CAACAACCTGCGCGACATTCCCACCGACGCCCGGTCGGGCAAGATCACCCTGGCGGTGCGGCTGGGCGACGCCCGCACCC GGGTGCTGTACCAGGCGCTGCTTTCCGCCGCCGCCGCGTTGACCCTGGTGCTCGTGGCGGCCACGCCGTGGTGCGCCGCG GGATTGGTGGCCACGCCGCTGGCGCTGCGCGCGGCGACCCCGGTGCGGTCCGGGCGCGGCGGCGCCGAGCTGATCCCGGT GCTGCGCGACACCGGCCTGGCGATGGTGGTGTGGGCGGTCGCGGTGGCGGCGGCGTTGACGTGGGGTACCTGA
Upstream 100 bases:
>100_bases AGAAGCCGCTGCCGCCGATGACTCCGAGCATCCGACCATTGTGGTGCATGAGCGCGGGCTGATCGCAGGGCCCGGCCGCG CATCCTGGCAGGATGTCGGT
Downstream 100 bases:
>100_bases CAGTGCGACCAGACGCAAAGGCGCCCGCGCACCGCGCTTTTGGGGTACTTTTGCGTCTGCTCGGGGGATAGCGAAGGACC GCAATGAAGCAGATTGCCGC
Product: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Products: NA
Alternate protein names: DHNA-octaprenyltransferase [H]
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MANLGQWISGARPRTLPNALAPVVAGTGAAAWLHAAVWWKALLALVVAVAMTVGVNYANDYSDGIRGTDDDRAGPVRLVG SRLAAPRAVLGAAIVSLTVGAIAGLVLALSSAPWLIAVGAACIAGAWLYTGGSKPYGYTGFGEVAVFVFFGLVAVLGTEY TQALRVDWVGLVLAVAVGALSSSVLVANNLRDIPTDARSGKITLAVRLGDARTRVLYQALLSAAAALTLVLVAATPWCAA GLVATPLALRAATPVRSGRGGAELIPVLRDTGLAMVVWAVAVAAALTWGT
Sequences:
>Translated_290_residues MANLGQWISGARPRTLPNALAPVVAGTGAAAWLHAAVWWKALLALVVAVAMTVGVNYANDYSDGIRGTDDDRAGPVRLVG SRLAAPRAVLGAAIVSLTVGAIAGLVLALSSAPWLIAVGAACIAGAWLYTGGSKPYGYTGFGEVAVFVFFGLVAVLGTEY TQALRVDWVGLVLAVAVGALSSSVLVANNLRDIPTDARSGKITLAVRLGDARTRVLYQALLSAAAALTLVLVAATPWCAA GLVATPLALRAATPVRSGRGGAELIPVLRDTGLAMVVWAVAVAAALTWGT >Mature_289_residues ANLGQWISGARPRTLPNALAPVVAGTGAAAWLHAAVWWKALLALVVAVAMTVGVNYANDYSDGIRGTDDDRAGPVRLVGS RLAAPRAVLGAAIVSLTVGAIAGLVLALSSAPWLIAVGAACIAGAWLYTGGSKPYGYTGFGEVAVFVFFGLVAVLGTEYT QALRVDWVGLVLAVAVGALSSSVLVANNLRDIPTDARSGKITLAVRLGDARTRVLYQALLSAAAALTLVLVAATPWCAAG LVATPLALRAATPVRSGRGGAELIPVLRDTGLAMVVWAVAVAAALTWGT
Specific function: Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to dimethylmenaquinone (DMK). Attaches octaprenylpyrophosphate, a membrane-bound 40-carbon side chain to DHNA. The conversion of DHNA to DMK proceeds in three stages:the removal of the carboxyl group of DHNA
COG id: COG1575
COG function: function code H; 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the menA family [H]
Homologues:
Organism=Homo sapiens, GI7019551, Length=256, Percent_Identity=26.171875, Blast_Score=77, Evalue=1e-14, Organism=Escherichia coli, GI1790365, Length=275, Percent_Identity=34.5454545454545, Blast_Score=139, Evalue=3e-34, Organism=Drosophila melanogaster, GI17737429, Length=272, Percent_Identity=26.8382352941176, Blast_Score=88, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004657 - InterPro: IPR000537 [H]
Pfam domain/function: PF01040 UbiA [H]
EC number: =2.5.1.74 [H]
Molecular weight: Translated: 29446; Mature: 29314
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLGQWISGARPRTLPNALAPVVAGTGAAAWLHAAVWWKALLALVVAVAMTVGVNYAND CCCHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC YSDGIRGTDDDRAGPVRLVGSRLAAPRAVLGAAIVSLTVGAIAGLVLALSSAPWLIAVGA CCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ACIAGAWLYTGGSKPYGYTGFGEVAVFVFFGLVAVLGTEYTQALRVDWVGLVLAVAVGAL HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSSVLVANNLRDIPTDARSGKITLAVRLGDARTRVLYQALLSAAAALTLVLVAATPWCAA HCCHHEECCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH GLVATPLALRAATPVRSGRGGAELIPVLRDTGLAMVVWAVAVAAALTWGT HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ANLGQWISGARPRTLPNALAPVVAGTGAAAWLHAAVWWKALLALVVAVAMTVGVNYAND CCHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC YSDGIRGTDDDRAGPVRLVGSRLAAPRAVLGAAIVSLTVGAIAGLVLALSSAPWLIAVGA CCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ACIAGAWLYTGGSKPYGYTGFGEVAVFVFFGLVAVLGTEYTQALRVDWVGLVLAVAVGAL HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSSVLVANNLRDIPTDARSGKITLAVRLGDARTRVLYQALLSAAAALTLVLVAATPWCAA HCCHHEECCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH GLVATPLALRAATPVRSGRGGAELIPVLRDTGLAMVVWAVAVAAALTWGT HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]