| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410109
Identifier: 41410109
GI number: 41410109
Start: 4473050
End: 4474003
Strand: Reverse
Name: 41410109
Synonym: MAP4011c
Alternate gene names: NA
Gene position: 4474003-4473050 (Counterclockwise)
Preceding gene: 41410110
Following gene: 41410108
Centisome position: 92.63
GC content: 68.87
Gene sequence:
>954_bases GTGACCGCAAGGTCACGCCAGATCACACAATGCTTGCAATACGGCGTGGCTCGGCGGGTTATGCCCGCCGGGCGCGGCAT TATTGCGATCATGCCTGACCTCACACGCCGGGCGGTGCTCCGGATGGGCGCCGGTGCCAGCCTCGGCGCCGCCGGCGTGT TCGCGCTCAGCGCCCTGCTGGATCCGGGCACCGCGCGCGCCGCCACCCTGCCGCAGGCCCCGGCGCCGTTCGAGCCGCCG ACGGCGGGCAAGACGCTGCCGACCCGGCTCACCGGATCGTTCGTGTCGGCGGCCCGCGGCGGCATCAAGACCAACTACGT GATCGCCATCCCGCCGGGGCAGACCGGGATGCTGCGTCCGGTGATCGCGCTGCACGGCGTGGACGGCGACGCCAACCAGA TGCTCGACATGGGCGTGCCCGACGGGCTGGCCCAGCTGGTCAAGGCCGGCAAGCCGCCGTTCGCGGTGGTGGGTGTCGAC GGCGGCAACACCTATTGGCACAAAAGGACTTCCGGCGAGGACTCGGGTGCGATGGTGCTCGACGAGCTGCTGCCGATGCT GTCCACCATGGGCTTCGACACCTCCCGGGTCGGGTTCATGGGGTGGTCGATGGGCGGCTACGGGGCGCTTCGCCTGGGCG CCAAGCTGGGCCCGTCGCGCACCGCCGGCATCTGCGCGATCAGCCCGGCGCTGTACACCTCGTACGCCACCAGTGCGCCC GGGGCGTTCGACAGCAACGAGGACTTCGTGCAGAACAGCGTGTTGGGCCTGCCCGCGCTGAATTCGATTCCGCTGCGGGT GGATTGCGGCAACTTCGACCGCTTCTATTTCGCCACAAAGCAATTCGTCTACCAGTTGAAGACACCACCGGCGGGCAGCT TCTCCCTCGGCGGACACGATATCGCCTTCTGGCGCAGTCAACTCCCCGCCGAACTGGCCTGGATGGCGACCTAG
Upstream 100 bases:
>100_bases AGTGACGGCGGCCACCGCGCGGGGCGCTAGGATGACTACGGCCGACCGCGCAAATCGAGCGTCGCTCGCGGCCCGCGGCG CGGCGAATGATCACCGGTTC
Downstream 100 bases:
>100_bases CCCACGCAGATGACACCCCGGCCGGAATCGCTCGCCAGCAGCCCACAGCCCGTGGAGCGGCGGGGCTCCCGAAGGGGATT CCGGCCCGACATCGAGGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Esterase Superfamily Protein
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MTARSRQITQCLQYGVARRVMPAGRGIIAIMPDLTRRAVLRMGAGASLGAAGVFALSALLDPGTARAATLPQAPAPFEPP TAGKTLPTRLTGSFVSAARGGIKTNYVIAIPPGQTGMLRPVIALHGVDGDANQMLDMGVPDGLAQLVKAGKPPFAVVGVD GGNTYWHKRTSGEDSGAMVLDELLPMLSTMGFDTSRVGFMGWSMGGYGALRLGAKLGPSRTAGICAISPALYTSYATSAP GAFDSNEDFVQNSVLGLPALNSIPLRVDCGNFDRFYFATKQFVYQLKTPPAGSFSLGGHDIAFWRSQLPAELAWMAT
Sequences:
>Translated_317_residues MTARSRQITQCLQYGVARRVMPAGRGIIAIMPDLTRRAVLRMGAGASLGAAGVFALSALLDPGTARAATLPQAPAPFEPP TAGKTLPTRLTGSFVSAARGGIKTNYVIAIPPGQTGMLRPVIALHGVDGDANQMLDMGVPDGLAQLVKAGKPPFAVVGVD GGNTYWHKRTSGEDSGAMVLDELLPMLSTMGFDTSRVGFMGWSMGGYGALRLGAKLGPSRTAGICAISPALYTSYATSAP GAFDSNEDFVQNSVLGLPALNSIPLRVDCGNFDRFYFATKQFVYQLKTPPAGSFSLGGHDIAFWRSQLPAELAWMAT >Mature_316_residues TARSRQITQCLQYGVARRVMPAGRGIIAIMPDLTRRAVLRMGAGASLGAAGVFALSALLDPGTARAATLPQAPAPFEPPT AGKTLPTRLTGSFVSAARGGIKTNYVIAIPPGQTGMLRPVIALHGVDGDANQMLDMGVPDGLAQLVKAGKPPFAVVGVDG GNTYWHKRTSGEDSGAMVLDELLPMLSTMGFDTSRVGFMGWSMGGYGALRLGAKLGPSRTAGICAISPALYTSYATSAPG AFDSNEDFVQNSVLGLPALNSIPLRVDCGNFDRFYFATKQFVYQLKTPPAGSFSLGGHDIAFWRSQLPAELAWMAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33213; Mature: 33082
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARSRQITQCLQYGVARRVMPAGRGIIAIMPDLTRRAVLRMGAGASLGAAGVFALSALL CCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHC DPGTARAATLPQAPAPFEPPTAGKTLPTRLTGSFVSAARGGIKTNYVIAIPPGQTGMLRP CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC VIALHGVDGDANQMLDMGVPDGLAQLVKAGKPPFAVVGVDGGNTYWHKRTSGEDSGAMVL EEEEECCCCCHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCCCCHHHH DELLPMLSTMGFDTSRVGFMGWSMGGYGALRLGAKLGPSRTAGICAISPALYTSYATSAP HHHHHHHHHCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCEEEECHHHHHHHCCCCC GAFDSNEDFVQNSVLGLPALNSIPLRVDCGNFDRFYFATKQFVYQLKTPPAGSFSLGGHD CCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHEEECCCCCCCCCCCCCH IAFWRSQLPAELAWMAT HHHHHHCCCHHHEEECC >Mature Secondary Structure TARSRQITQCLQYGVARRVMPAGRGIIAIMPDLTRRAVLRMGAGASLGAAGVFALSALL CCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHC DPGTARAATLPQAPAPFEPPTAGKTLPTRLTGSFVSAARGGIKTNYVIAIPPGQTGMLRP CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC VIALHGVDGDANQMLDMGVPDGLAQLVKAGKPPFAVVGVDGGNTYWHKRTSGEDSGAMVL EEEEECCCCCHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCCCCHHHH DELLPMLSTMGFDTSRVGFMGWSMGGYGALRLGAKLGPSRTAGICAISPALYTSYATSAP HHHHHHHHHCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCEEEECHHHHHHHCCCCC GAFDSNEDFVQNSVLGLPALNSIPLRVDCGNFDRFYFATKQFVYQLKTPPAGSFSLGGHD CCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHEEECCCCCCCCCCCCCH IAFWRSQLPAELAWMAT HHHHHHCCCHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA