Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41410012
Identifier: 41410012
GI number: 41410012
Start: 4377304
End: 4377582
Strand: Reverse
Name: 41410012
Synonym: MAP3914c
Alternate gene names: NA
Gene position: 4377582-4377304 (Counterclockwise)
Preceding gene: 41410013
Following gene: 41410011
Centisome position: 90.64
GC content: 68.82
Gene sequence:
>279_bases ATGATGGCGGAAAAGAAGGCGAGGCGCGGCACGTCCCAGCGCGAGGCGGTGGAAAAGATCCGGGAGGGCGAGACCTTCGT GGTGAACCTGCCGGGCCTGGGCCAGGTCGAGATTCCCCGGCCCGAGCAGCTGGCCTACTTCGGCGGGCTGGCCGCCCTGG CGGCGCTGGAGCTCATCGACTGGCCGGTGGCCGTGGTCATCGCCGCGGGGCACCTGCTGGCCAGCAATCACCACAACAAG ATCCTCGAGGAGCTCGGGGAGGCGATGGAGGAGGTGTGA
Upstream 100 bases:
>100_bases AAACTAGCGGATCGCCCCCGGTGTCGGTCATCGTCGACATAGTTCCGACGGTGGACGCGCGACCCAGCGAGTCGGGAAAC CCTTCGTTACCGAAAGGCAA
Downstream 100 bases:
>100_bases GGGTTGGCGCGCGGTGACCGCGCGGCACGAACCGGCGGGAATAGGGCCGTCGGCCATGCCATGCGGTTGCCGGTGGGGGT AACGTCGCGTGCGGACCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MMAEKKARRGTSQREAVEKIREGETFVVNLPGLGQVEIPRPEQLAYFGGLAALAALELIDWPVAVVIAAGHLLASNHHNK ILEELGEAMEEV
Sequences:
>Translated_92_residues MMAEKKARRGTSQREAVEKIREGETFVVNLPGLGQVEIPRPEQLAYFGGLAALAALELIDWPVAVVIAAGHLLASNHHNK ILEELGEAMEEV >Mature_92_residues MMAEKKARRGTSQREAVEKIREGETFVVNLPGLGQVEIPRPEQLAYFGGLAALAALELIDWPVAVVIAAGHLLASNHHNK ILEELGEAMEEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10030; Mature: 10030
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAEKKARRGTSQREAVEKIREGETFVVNLPGLGQVEIPRPEQLAYFGGLAALAALELID CCCCCHHHCCCHHHHHHHHHHCCCEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHH WPVAVVIAAGHLLASNHHNKILEELGEAMEEV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MMAEKKARRGTSQREAVEKIREGETFVVNLPGLGQVEIPRPEQLAYFGGLAALAALELID CCCCCHHHCCCHHHHHHHHHHCCCEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHH WPVAVVIAAGHLLASNHHNKILEELGEAMEEV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA