Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41409981
Identifier: 41409981
GI number: 41409981
Start: 4344063
End: 4344806
Strand: Reverse
Name: 41409981
Synonym: MAP3883c
Alternate gene names: NA
Gene position: 4344806-4344063 (Counterclockwise)
Preceding gene: 41409985
Following gene: 41409977
Centisome position: 89.96
GC content: 71.24
Gene sequence:
>744_bases ATGGCGGAGCTAGTTCAGGTCACCGACGCGGTGCACCTCGCCCGGGGGGACGCGGTCAACTGGACGCTGGTCGCCGACGA CACCGGGGTGATGCTGGTCGACGCCGGCTATCCCGGGGACCGCGAGGACGTGCTGGGCTCGCTGGCCGAGCTCGGCTACG GCCCGGGCGACGTGCGCGCCATCGTGTTGACGCACGCGCACATCGACCACCTGGGCACCGCGATCTGGTTGGCGAGCGAG CACGGCATCCCGGTTTACTGCCACGCCGACGAGGTGGGCCACGCCAAACGCGAGTACCTGGAGCAGGTGTCGATTGTTGA TGTGGCGCTTCGCATTTGGCGGCCCCGATGGGCGAAGTGGACCGCGCATGTGGTCCGCAGCGGCGGCCTGATCCGCGACG GCATCCCCACCGCCCGGCCGTTGACCGCGGAGGTGGCCGCCGGGCTGCCGGGCCGGCCGACGCCGGTCTTCAGCCCCGGG CACACCAACGGCCATTGCTCGTACCTGATCGACGGCGTCCTGGTCAGTGGCGACGCGCTGATCACCGGACATCCCCTGCT GCGCCACCGCGGACCTCAGCTGCTCCCGGCGATTTTCAGTTACAGCCAGCGCGACTGCATCCGCACGCTGTCCGCGCTCG CCCTGCTCGACACCGAGGTGCTGCTGCCCGGCCACGGCGACGTGTGGCGCGGGCCGATCAAGGAGGCCACCGACGCGGCG CTCGCGCTCGCCACGGGTCGCTAG
Upstream 100 bases:
>100_bases TCGACCAGCTCGCGTGGTGCAAATTGTTCGGCGGACGCTTTGTATCCGAGTTTGAGTTCAGCCACGGGTCATTTCTACTC CTCCGCTTACACTCGCGGGC
Downstream 100 bases:
>100_bases GCCGGCGCCCGAGCGTGGGCCCCACGTACGCCAACCGCCGGGAATTCGTCCATACGGCCCACGCTCGGCGCCAGTAGGCT GTTGCGGCCCAGGGCAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase Domain-Containing Protein; Beta-Lactamase; Metallo-Beta-Lactamase Superfamily; Hydroxyacylglutathione Hydrolase Glyoxalase II; Beta Lactamase-Like Protein; Zn-Dependent Hydrolase Glyoxylase; Metallo-Beta-Lactamase; Beta-Lactamase-Like; Beta Lactamase; Beta-Lactamase-Like Protein
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MAELVQVTDAVHLARGDAVNWTLVADDTGVMLVDAGYPGDREDVLGSLAELGYGPGDVRAIVLTHAHIDHLGTAIWLASE HGIPVYCHADEVGHAKREYLEQVSIVDVALRIWRPRWAKWTAHVVRSGGLIRDGIPTARPLTAEVAAGLPGRPTPVFSPG HTNGHCSYLIDGVLVSGDALITGHPLLRHRGPQLLPAIFSYSQRDCIRTLSALALLDTEVLLPGHGDVWRGPIKEATDAA LALATGR
Sequences:
>Translated_247_residues MAELVQVTDAVHLARGDAVNWTLVADDTGVMLVDAGYPGDREDVLGSLAELGYGPGDVRAIVLTHAHIDHLGTAIWLASE HGIPVYCHADEVGHAKREYLEQVSIVDVALRIWRPRWAKWTAHVVRSGGLIRDGIPTARPLTAEVAAGLPGRPTPVFSPG HTNGHCSYLIDGVLVSGDALITGHPLLRHRGPQLLPAIFSYSQRDCIRTLSALALLDTEVLLPGHGDVWRGPIKEATDAA LALATGR >Mature_246_residues AELVQVTDAVHLARGDAVNWTLVADDTGVMLVDAGYPGDREDVLGSLAELGYGPGDVRAIVLTHAHIDHLGTAIWLASEH GIPVYCHADEVGHAKREYLEQVSIVDVALRIWRPRWAKWTAHVVRSGGLIRDGIPTARPLTAEVAAGLPGRPTPVFSPGH TNGHCSYLIDGVLVSGDALITGHPLLRHRGPQLLPAIFSYSQRDCIRTLSALALLDTEVLLPGHGDVWRGPIKEATDAAL ALATGR
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26441; Mature: 26310
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELVQVTDAVHLARGDAVNWTLVADDTGVMLVDAGYPGDREDVLGSLAELGYGPGDVRA CCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEE IVLTHAHIDHLGTAIWLASEHGIPVYCHADEVGHAKREYLEQVSIVDVALRIWRPRWAKW EEEEEHHHHHHCEEEEEECCCCCEEEEECHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHH TAHVVRSGGLIRDGIPTARPLTAEVAAGLPGRPTPVFSPGHTNGHCSYLIDGVLVSGDAL HHHHHHCCCEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEE ITGHPLLRHRGPQLLPAIFSYSQRDCIRTLSALALLDTEVLLPGHGDVWRGPIKEATDAA EECCHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHCCCE LALATGR EEEECCC >Mature Secondary Structure AELVQVTDAVHLARGDAVNWTLVADDTGVMLVDAGYPGDREDVLGSLAELGYGPGDVRA CCHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEE IVLTHAHIDHLGTAIWLASEHGIPVYCHADEVGHAKREYLEQVSIVDVALRIWRPRWAKW EEEEEHHHHHHCEEEEEECCCCCEEEEECHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHH TAHVVRSGGLIRDGIPTARPLTAEVAAGLPGRPTPVFSPGHTNGHCSYLIDGVLVSGDAL HHHHHHCCCEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEE ITGHPLLRHRGPQLLPAIFSYSQRDCIRTLSALALLDTEVLLPGHGDVWRGPIKEATDAA EECCHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHCCCE LALATGR EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA