Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409965

Identifier: 41409965

GI number: 41409965

Start: 4328425

End: 4329120

Strand: Reverse

Name: 41409965

Synonym: MAP3867c

Alternate gene names: NA

Gene position: 4329120-4328425 (Counterclockwise)

Preceding gene: 41409972

Following gene: 41409964

Centisome position: 89.63

GC content: 75.86

Gene sequence:

>696_bases
ATGTTGGGAGACAAGGACATTGGATGTTCCCCGATTGGATGGGCTGTGACGCAACAGGATCGGGCCGCCGCGGTTCTTCA
GTTCGGCCGGCGACACGGCTACCGGCCGTTGCGCGGCATGCCCACCCATCGGGTCGCCGGTGACACCGATGTCGACGCCG
CGATCGGCCCGTACCGGCGGCTGATCGTGCTCGGCGGCGACGCCGAGCTGGCATTGGTGCTGACCCGGCTGCTGCGCGCC
GAGCGGCTGGACGTCGAGGTGGCCTACGTGCCGCGCCGGCGCACCCGGGCCACCCGGAACTACCGGCTGCCCACCGGATT
CCGGGCGGCGCGGCGGGCCGCGCGGGGTGCGGCGCGGCGGGTGCCGCTGATCCGCGACGAGACGGGCTCGGCGATCGTCG
GGCGGGCCTGCTGGGCGGCGCCCGGCGGGCAGCGGTGGCTGCACGGCGAGGCCGTCGTCGACGACACCACGTTGTTCGAC
GGCGACGTCACCGCCGTGTGGATCGAGCCGACGGCGGCGATGCCGGGCCTGCGGGCGGCGGTCGCGGGCCGGCCGTGGCG
GCGCTGGGTCACCGGCCGGGCGGCGCAGCTGGGCAGCACCGGGGCGACAGTGCTGCGCGACGGCGTGCCGGCCGCCCGCC
CCGCGCGGCGGTCGGCCTTCTACCGCAACATCGAGGGCTGGCTGCTGGTCCGCTAG

Upstream 100 bases:

>100_bases
TTCCCGGAAGCGTGGCAACAACTTTCGCAGTCCGACGCCATGTTGTGACCGTGTCGTTATGGTGCGCCCTTTCGGCGTCG
CGGTTCATGTCCGCTCAGAG

Downstream 100 bases:

>100_bases
TTTCGACCGGTGAGCTTCCGCGCCCCCCAACACGAGTCGGTGCGGCCCAGCCCGATCTTTCTGGCCCTGCTGGGGTTGAC
CGCGCTGGGCGGCGCGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MLGDKDIGCSPIGWAVTQQDRAAAVLQFGRRHGYRPLRGMPTHRVAGDTDVDAAIGPYRRLIVLGGDAELALVLTRLLRA
ERLDVEVAYVPRRRTRATRNYRLPTGFRAARRAARGAARRVPLIRDETGSAIVGRACWAAPGGQRWLHGEAVVDDTTLFD
GDVTAVWIEPTAAMPGLRAAVAGRPWRRWVTGRAAQLGSTGATVLRDGVPAARPARRSAFYRNIEGWLLVR

Sequences:

>Translated_231_residues
MLGDKDIGCSPIGWAVTQQDRAAAVLQFGRRHGYRPLRGMPTHRVAGDTDVDAAIGPYRRLIVLGGDAELALVLTRLLRA
ERLDVEVAYVPRRRTRATRNYRLPTGFRAARRAARGAARRVPLIRDETGSAIVGRACWAAPGGQRWLHGEAVVDDTTLFD
GDVTAVWIEPTAAMPGLRAAVAGRPWRRWVTGRAAQLGSTGATVLRDGVPAARPARRSAFYRNIEGWLLVR
>Mature_231_residues
MLGDKDIGCSPIGWAVTQQDRAAAVLQFGRRHGYRPLRGMPTHRVAGDTDVDAAIGPYRRLIVLGGDAELALVLTRLLRA
ERLDVEVAYVPRRRTRATRNYRLPTGFRAARRAARGAARRVPLIRDETGSAIVGRACWAAPGGQRWLHGEAVVDDTTLFD
GDVTAVWIEPTAAMPGLRAAVAGRPWRRWVTGRAAQLGSTGATVLRDGVPAARPARRSAFYRNIEGWLLVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25292; Mature: 25292

Theoretical pI: Translated: 11.95; Mature: 11.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGDKDIGCSPIGWAVTQQDRAAAVLQFGRRHGYRPLRGMPTHRVAGDTDVDAAIGPYRR
CCCCCCCCCCCCCCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCEE
LIVLGGDAELALVLTRLLRAERLDVEVAYVPRRRTRATRNYRLPTGFRAARRAARGAARR
EEEECCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCCCCCCCHHHHHHHHHHHHHC
VPLIRDETGSAIVGRACWAAPGGQRWLHGEAVVDDTTLFDGDVTAVWIEPTAAMPGLRAA
CCEEECCCCCEEECHHHHCCCCCCEEECCCEEECCCEEECCCEEEEEEECCCCCCCCHHH
VAGRPWRRWVTGRAAQLGSTGATVLRDGVPAARPARRSAFYRNIEGWLLVR
HCCCCHHHHHCCCHHHCCCCCCHHHHCCCCCCCCHHHHHHHHCCCEEEEEC
>Mature Secondary Structure
MLGDKDIGCSPIGWAVTQQDRAAAVLQFGRRHGYRPLRGMPTHRVAGDTDVDAAIGPYRR
CCCCCCCCCCCCCCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCEE
LIVLGGDAELALVLTRLLRAERLDVEVAYVPRRRTRATRNYRLPTGFRAARRAARGAARR
EEEECCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCCCCCCCHHHHHHHHHHHHHC
VPLIRDETGSAIVGRACWAAPGGQRWLHGEAVVDDTTLFDGDVTAVWIEPTAAMPGLRAA
CCEEECCCCCEEECHHHHCCCCCCEEECCCEEECCCEEECCCEEEEEEECCCCCCCCHHH
VAGRPWRRWVTGRAAQLGSTGATVLRDGVPAARPARRSAFYRNIEGWLLVR
HCCCCHHHHHCCCHHHCCCCCCHHHHCCCCCCCCHHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA