Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41409965
Identifier: 41409965
GI number: 41409965
Start: 4328425
End: 4329120
Strand: Reverse
Name: 41409965
Synonym: MAP3867c
Alternate gene names: NA
Gene position: 4329120-4328425 (Counterclockwise)
Preceding gene: 41409972
Following gene: 41409964
Centisome position: 89.63
GC content: 75.86
Gene sequence:
>696_bases ATGTTGGGAGACAAGGACATTGGATGTTCCCCGATTGGATGGGCTGTGACGCAACAGGATCGGGCCGCCGCGGTTCTTCA GTTCGGCCGGCGACACGGCTACCGGCCGTTGCGCGGCATGCCCACCCATCGGGTCGCCGGTGACACCGATGTCGACGCCG CGATCGGCCCGTACCGGCGGCTGATCGTGCTCGGCGGCGACGCCGAGCTGGCATTGGTGCTGACCCGGCTGCTGCGCGCC GAGCGGCTGGACGTCGAGGTGGCCTACGTGCCGCGCCGGCGCACCCGGGCCACCCGGAACTACCGGCTGCCCACCGGATT CCGGGCGGCGCGGCGGGCCGCGCGGGGTGCGGCGCGGCGGGTGCCGCTGATCCGCGACGAGACGGGCTCGGCGATCGTCG GGCGGGCCTGCTGGGCGGCGCCCGGCGGGCAGCGGTGGCTGCACGGCGAGGCCGTCGTCGACGACACCACGTTGTTCGAC GGCGACGTCACCGCCGTGTGGATCGAGCCGACGGCGGCGATGCCGGGCCTGCGGGCGGCGGTCGCGGGCCGGCCGTGGCG GCGCTGGGTCACCGGCCGGGCGGCGCAGCTGGGCAGCACCGGGGCGACAGTGCTGCGCGACGGCGTGCCGGCCGCCCGCC CCGCGCGGCGGTCGGCCTTCTACCGCAACATCGAGGGCTGGCTGCTGGTCCGCTAG
Upstream 100 bases:
>100_bases TTCCCGGAAGCGTGGCAACAACTTTCGCAGTCCGACGCCATGTTGTGACCGTGTCGTTATGGTGCGCCCTTTCGGCGTCG CGGTTCATGTCCGCTCAGAG
Downstream 100 bases:
>100_bases TTTCGACCGGTGAGCTTCCGCGCCCCCCAACACGAGTCGGTGCGGCCCAGCCCGATCTTTCTGGCCCTGCTGGGGTTGAC CGCGCTGGGCGGCGCGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MLGDKDIGCSPIGWAVTQQDRAAAVLQFGRRHGYRPLRGMPTHRVAGDTDVDAAIGPYRRLIVLGGDAELALVLTRLLRA ERLDVEVAYVPRRRTRATRNYRLPTGFRAARRAARGAARRVPLIRDETGSAIVGRACWAAPGGQRWLHGEAVVDDTTLFD GDVTAVWIEPTAAMPGLRAAVAGRPWRRWVTGRAAQLGSTGATVLRDGVPAARPARRSAFYRNIEGWLLVR
Sequences:
>Translated_231_residues MLGDKDIGCSPIGWAVTQQDRAAAVLQFGRRHGYRPLRGMPTHRVAGDTDVDAAIGPYRRLIVLGGDAELALVLTRLLRA ERLDVEVAYVPRRRTRATRNYRLPTGFRAARRAARGAARRVPLIRDETGSAIVGRACWAAPGGQRWLHGEAVVDDTTLFD GDVTAVWIEPTAAMPGLRAAVAGRPWRRWVTGRAAQLGSTGATVLRDGVPAARPARRSAFYRNIEGWLLVR >Mature_231_residues MLGDKDIGCSPIGWAVTQQDRAAAVLQFGRRHGYRPLRGMPTHRVAGDTDVDAAIGPYRRLIVLGGDAELALVLTRLLRA ERLDVEVAYVPRRRTRATRNYRLPTGFRAARRAARGAARRVPLIRDETGSAIVGRACWAAPGGQRWLHGEAVVDDTTLFD GDVTAVWIEPTAAMPGLRAAVAGRPWRRWVTGRAAQLGSTGATVLRDGVPAARPARRSAFYRNIEGWLLVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25292; Mature: 25292
Theoretical pI: Translated: 11.95; Mature: 11.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGDKDIGCSPIGWAVTQQDRAAAVLQFGRRHGYRPLRGMPTHRVAGDTDVDAAIGPYRR CCCCCCCCCCCCCCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCEE LIVLGGDAELALVLTRLLRAERLDVEVAYVPRRRTRATRNYRLPTGFRAARRAARGAARR EEEECCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCCCCCCCHHHHHHHHHHHHHC VPLIRDETGSAIVGRACWAAPGGQRWLHGEAVVDDTTLFDGDVTAVWIEPTAAMPGLRAA CCEEECCCCCEEECHHHHCCCCCCEEECCCEEECCCEEECCCEEEEEEECCCCCCCCHHH VAGRPWRRWVTGRAAQLGSTGATVLRDGVPAARPARRSAFYRNIEGWLLVR HCCCCHHHHHCCCHHHCCCCCCHHHHCCCCCCCCHHHHHHHHCCCEEEEEC >Mature Secondary Structure MLGDKDIGCSPIGWAVTQQDRAAAVLQFGRRHGYRPLRGMPTHRVAGDTDVDAAIGPYRR CCCCCCCCCCCCCCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCEE LIVLGGDAELALVLTRLLRAERLDVEVAYVPRRRTRATRNYRLPTGFRAARRAARGAARR EEEECCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCCCCCCCHHHHHHHHHHHHHC VPLIRDETGSAIVGRACWAAPGGQRWLHGEAVVDDTTLFDGDVTAVWIEPTAAMPGLRAA CCEEECCCCCEEECHHHHCCCCCCEEECCCEEECCCEEECCCEEEEEEECCCCCCCCHHH VAGRPWRRWVTGRAAQLGSTGATVLRDGVPAARPARRSAFYRNIEGWLLVR HCCCCHHHHHCCCHHHCCCCCCHHHHCCCCCCCCHHHHHHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA