Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409934

Identifier: 41409934

GI number: 41409934

Start: 4290746

End: 4293079

Strand: Reverse

Name: 41409934

Synonym: MAP3836c

Alternate gene names: NA

Gene position: 4293079-4290746 (Counterclockwise)

Preceding gene: 41409935

Following gene: 41409933

Centisome position: 88.89

GC content: 61.65

Gene sequence:

>2334_bases
ATGCAGCTAAAGCATCTCACCATCGCCGAGCTGGTTGCCGGGGCTGGCGGTGATCCGTGGGAGGTCAACCGGACCTTGCA
GGCCGGCCGCCCGGCCCAGATTGAGCGTTTGGCAGAAGCTTTCCACGGCGCGGGGCGTCACACCGCCGAGTCCGACCATG
CATTCGCGCAGGCGCAGCAACGTTTCAATGCCGCCTGGAACCATCAGGACGGCGGCCCCAACCCGATCAATAGCTCAGCG
GAAGTGCAGCGGACCGTCAAATCCCTTGGCGCGCAGTCTGAACAGTTGCCCAAGATCGGCGCCGACTTGGAAAACATCGC
CGCTGCATTGTCCGAGGCGCAAAAAAGCGGTGCTGCAGAGATCGCCACCTTGGAAGGTCAGCTGGAGCAGCTCGACCACA
TGATCGACTTGGCCGAGCAGGATCTGCGGGACCACCCCGACGCGGCGAGCCAGCAAGAGCTGCATGCGATTATCAAAGCT
CTCCGAACGGCTGCGGTTAATGACACCAAGGATGCGCTCGGCCAGCTGCATGCCACCCGCGACAGCTATTCGAGTTCCCT
TCGCAAAGCGCAGACCAACTTGGCCAACGACGGATACGACCCCACATCGACCTTCGGTGCCGACGCCCATGAAGCCGAAA
CGCCCGACCAGGCAAGACAAGACGTCACCGATGCCCTGGCGGGTGACAAGGGGGCCGCTTCCCGCGTCAACGGCGTCCTG
AACTCGATCACCCCCGACCAGCTGGCCGGGAAGGTGCCGTTGACCGCCGAGCAGGCTTCGGTGTTGAGCCAACTACAGGC
GCAAGAACATGGCATGTCTATGGATGCGCTCAAGACCGCCGAACAGCGTTTGGGCGACGAGAAAGGCGTGATCGGCAATT
CGTTGCAGCTGATGAGCAACCCGAATCTCATGTTCCCTCAGACCCCGCTGAGCATTGGCGCGAAGCAGGGAACCGACATG
GTCAAAGGCGGGGCCAACCAGTTGCCCACAAGTGTTCAGCAGCTGCTGAATTCACCGCGACCGGACCTTCGCCACCTGAA
CCAGCTCGCTGACATCGTCAAAGACGGCAACCACACCTTCCAGGCCAACACCGACTTGGACCGTGGGATGGTCAAGCAGG
CATCGACGCTCATGAATAGCCCGTTTTGGCGTGCCGGTGAAGGCGGTCCTGGCGACCTCAACCCCGGCATCGACCCCACG
GTTTCCAACGTCTTATCGGCGGCATCACCTGATCACCAAGTGGTGCACGACGCCATGACCACCGGCGACCATGACCGCTT
CCTGCAGAACCTCACACACCATTCCTGGCAAGACCACGGCCAGGCGGTGAGCTCGCTGTTTTCTTGGACGGGTGATGCGA
CCCAAGGACCCGAAGCAAGCATCGCCGCTCAAACCGCACACGCCTACAGCACCTACATCGGGCACCACCAGCAGGACCTA
TTGAACCTTCCCGGCAATCACACCCTCGGACAGGTCAACCCCAATCTCGTACAGGGCATGGCCCACGGTTTGGGGCCTTA
CGTCGACAACATCGCCGGTACGACCGGCGGACTGCCAGGATTCGGCGACTCCCTAGACAACGAGGGCGACACTCGATCTG
GCGCGCTGCCGGTCGCCAAGGGCGTCTTCTCAGTCCTCAATAGCGACCAAGCCGCCGGCCAATACTTCAACGGTCAAGCC
TATGCACATGCCGTGGCTCACGAAGCCGCCTTCGGCAATGAGCCGACTCATTCCGGTTACGACACCCAGCTTTACGACGC
CGCGACTCTGAAGGGCCTGGTCGACGTCGGAACTCACAACGCCTATCACGCGAATGAAGTAAACGGATATCACCAACAGT
TATCCGAATACGAGTTGAAGAAACAGGCATACGAGGCCGGGCTCACCGGTCTAGGCACCGTGGCCGGGTTACCGCCAGGT
GTCGGTACCGTGGCCAACCCCGCACTCAACGTGCTCGGACACGGGCTGGAAAACAGCATCCTCGGGCCGGCTCCCAGCGC
ACCAGGCGAGAACCCCATCCAACCGATGGACATCGGCGTCGCAGACCAAGGAATGGCCAATGCGATGCTCGCGGCCGGGC
ACAACGTCCAGCTTCCGGACGGGTACGTCGTGTACGACGATCAACACCCGCACGGGCGACTCGCAACACTCGACGAAGCA
AGGGCGAAATTCCCCGGGCTTACTGCTAGTCAGTACGACGGCGTGATTGGCCCTGCGCTATCGCACGCAATCGCATTGCC
GCCCGAGGAAAAAATGTCTCCGGATGAGTGGATGGCCATCCGCTACGACAATGTCGTCGGCGTTCCGCACGCGGACCAGG
GACGCCCGAAGTGA

Upstream 100 bases:

>100_bases
ATGCTGTCGGGAGGGGTTGGCGGCGCTCCGGGGCTTACTGCCCTGACCGATGTGCAACGGGAGTGGTTGACCAGTCACCG
CGAACTGGTATGGGGATGCG

Downstream 100 bases:

>100_bases
CGAATGTGTTACGCAAGTTCGGCGGTATTGCCACCTGCGTGGTATTCGCCGTGATCTCGATAGCTGGATGCCACTCAGGC
GCCCACCGTTCTGAGGCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 777; Mature: 777

Protein sequence:

>777_residues
MQLKHLTIAELVAGAGGDPWEVNRTLQAGRPAQIERLAEAFHGAGRHTAESDHAFAQAQQRFNAAWNHQDGGPNPINSSA
EVQRTVKSLGAQSEQLPKIGADLENIAAALSEAQKSGAAEIATLEGQLEQLDHMIDLAEQDLRDHPDAASQQELHAIIKA
LRTAAVNDTKDALGQLHATRDSYSSSLRKAQTNLANDGYDPTSTFGADAHEAETPDQARQDVTDALAGDKGAASRVNGVL
NSITPDQLAGKVPLTAEQASVLSQLQAQEHGMSMDALKTAEQRLGDEKGVIGNSLQLMSNPNLMFPQTPLSIGAKQGTDM
VKGGANQLPTSVQQLLNSPRPDLRHLNQLADIVKDGNHTFQANTDLDRGMVKQASTLMNSPFWRAGEGGPGDLNPGIDPT
VSNVLSAASPDHQVVHDAMTTGDHDRFLQNLTHHSWQDHGQAVSSLFSWTGDATQGPEASIAAQTAHAYSTYIGHHQQDL
LNLPGNHTLGQVNPNLVQGMAHGLGPYVDNIAGTTGGLPGFGDSLDNEGDTRSGALPVAKGVFSVLNSDQAAGQYFNGQA
YAHAVAHEAAFGNEPTHSGYDTQLYDAATLKGLVDVGTHNAYHANEVNGYHQQLSEYELKKQAYEAGLTGLGTVAGLPPG
VGTVANPALNVLGHGLENSILGPAPSAPGENPIQPMDIGVADQGMANAMLAAGHNVQLPDGYVVYDDQHPHGRLATLDEA
RAKFPGLTASQYDGVIGPALSHAIALPPEEKMSPDEWMAIRYDNVVGVPHADQGRPK

Sequences:

>Translated_777_residues
MQLKHLTIAELVAGAGGDPWEVNRTLQAGRPAQIERLAEAFHGAGRHTAESDHAFAQAQQRFNAAWNHQDGGPNPINSSA
EVQRTVKSLGAQSEQLPKIGADLENIAAALSEAQKSGAAEIATLEGQLEQLDHMIDLAEQDLRDHPDAASQQELHAIIKA
LRTAAVNDTKDALGQLHATRDSYSSSLRKAQTNLANDGYDPTSTFGADAHEAETPDQARQDVTDALAGDKGAASRVNGVL
NSITPDQLAGKVPLTAEQASVLSQLQAQEHGMSMDALKTAEQRLGDEKGVIGNSLQLMSNPNLMFPQTPLSIGAKQGTDM
VKGGANQLPTSVQQLLNSPRPDLRHLNQLADIVKDGNHTFQANTDLDRGMVKQASTLMNSPFWRAGEGGPGDLNPGIDPT
VSNVLSAASPDHQVVHDAMTTGDHDRFLQNLTHHSWQDHGQAVSSLFSWTGDATQGPEASIAAQTAHAYSTYIGHHQQDL
LNLPGNHTLGQVNPNLVQGMAHGLGPYVDNIAGTTGGLPGFGDSLDNEGDTRSGALPVAKGVFSVLNSDQAAGQYFNGQA
YAHAVAHEAAFGNEPTHSGYDTQLYDAATLKGLVDVGTHNAYHANEVNGYHQQLSEYELKKQAYEAGLTGLGTVAGLPPG
VGTVANPALNVLGHGLENSILGPAPSAPGENPIQPMDIGVADQGMANAMLAAGHNVQLPDGYVVYDDQHPHGRLATLDEA
RAKFPGLTASQYDGVIGPALSHAIALPPEEKMSPDEWMAIRYDNVVGVPHADQGRPK
>Mature_777_residues
MQLKHLTIAELVAGAGGDPWEVNRTLQAGRPAQIERLAEAFHGAGRHTAESDHAFAQAQQRFNAAWNHQDGGPNPINSSA
EVQRTVKSLGAQSEQLPKIGADLENIAAALSEAQKSGAAEIATLEGQLEQLDHMIDLAEQDLRDHPDAASQQELHAIIKA
LRTAAVNDTKDALGQLHATRDSYSSSLRKAQTNLANDGYDPTSTFGADAHEAETPDQARQDVTDALAGDKGAASRVNGVL
NSITPDQLAGKVPLTAEQASVLSQLQAQEHGMSMDALKTAEQRLGDEKGVIGNSLQLMSNPNLMFPQTPLSIGAKQGTDM
VKGGANQLPTSVQQLLNSPRPDLRHLNQLADIVKDGNHTFQANTDLDRGMVKQASTLMNSPFWRAGEGGPGDLNPGIDPT
VSNVLSAASPDHQVVHDAMTTGDHDRFLQNLTHHSWQDHGQAVSSLFSWTGDATQGPEASIAAQTAHAYSTYIGHHQQDL
LNLPGNHTLGQVNPNLVQGMAHGLGPYVDNIAGTTGGLPGFGDSLDNEGDTRSGALPVAKGVFSVLNSDQAAGQYFNGQA
YAHAVAHEAAFGNEPTHSGYDTQLYDAATLKGLVDVGTHNAYHANEVNGYHQQLSEYELKKQAYEAGLTGLGTVAGLPPG
VGTVANPALNVLGHGLENSILGPAPSAPGENPIQPMDIGVADQGMANAMLAAGHNVQLPDGYVVYDDQHPHGRLATLDEA
RAKFPGLTASQYDGVIGPALSHAIALPPEEKMSPDEWMAIRYDNVVGVPHADQGRPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010427 [H]

Pfam domain/function: PF06259 DUF1023 [H]

EC number: NA

Molecular weight: Translated: 82025; Mature: 82025

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLKHLTIAELVAGAGGDPWEVNRTLQAGRPAQIERLAEAFHGAGRHTAESDHAFAQAQQ
CCCCHHHHHHHHHCCCCCCHHCCHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
RFNAAWNHQDGGPNPINSSAEVQRTVKSLGAQSEQLPKIGADLENIAAALSEAQKSGAAE
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCHHCCCHHHHHHHHHHHHHCCCHH
IATLEGQLEQLDHMIDLAEQDLRDHPDAASQQELHAIIKALRTAAVNDTKDALGQLHATR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
DSYSSSLRKAQTNLANDGYDPTSTFGADAHEAETPDQARQDVTDALAGDKGAASRVNGVL
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
NSITPDQLAGKVPLTAEQASVLSQLQAQEHGMSMDALKTAEQRLGDEKGVIGNSLQLMSN
HCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHCC
PNLMFPQTPLSIGAKQGTDMVKGGANQLPTSVQQLLNSPRPDLRHLNQLADIVKDGNHTF
CCEECCCCCHHCCCCCCCHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEE
QANTDLDRGMVKQASTLMNSPFWRAGEGGPGDLNPGIDPTVSNVLSAASPDHQVVHDAMT
EECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHH
TGDHDRFLQNLTHHSWQDHGQAVSSLFSWTGDATQGPEASIAAQTAHAYSTYIGHHQQDL
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH
LNLPGNHTLGQVNPNLVQGMAHGLGPYVDNIAGTTGGLPGFGDSLDNEGDTRSGALPVAK
HCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
GVFSVLNSDQAAGQYFNGQAYAHAVAHEAAFGNEPTHSGYDTQLYDAATLKGLVDVGTHN
HHHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
AYHANEVNGYHQQLSEYELKKQAYEAGLTGLGTVAGLPPGVGTVANPALNVLGHGLENSI
CCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHCCHHCCC
LGPAPSAPGENPIQPMDIGVADQGMANAMLAAGHNVQLPDGYVVYDDQHPHGRLATLDEA
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEHHHHH
RAKFPGLTASQYDGVIGPALSHAIALPPEEKMSPDEWMAIRYDNVVGVPHADQGRPK
HHHCCCCCHHHCCCCHHHHHHHHCCCCCHHCCCCCCEEEEEECCEECCCCCCCCCCC
>Mature Secondary Structure
MQLKHLTIAELVAGAGGDPWEVNRTLQAGRPAQIERLAEAFHGAGRHTAESDHAFAQAQQ
CCCCHHHHHHHHHCCCCCCHHCCHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
RFNAAWNHQDGGPNPINSSAEVQRTVKSLGAQSEQLPKIGADLENIAAALSEAQKSGAAE
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCHHCCCHHHHHHHHHHHHHCCCHH
IATLEGQLEQLDHMIDLAEQDLRDHPDAASQQELHAIIKALRTAAVNDTKDALGQLHATR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
DSYSSSLRKAQTNLANDGYDPTSTFGADAHEAETPDQARQDVTDALAGDKGAASRVNGVL
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
NSITPDQLAGKVPLTAEQASVLSQLQAQEHGMSMDALKTAEQRLGDEKGVIGNSLQLMSN
HCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHCC
PNLMFPQTPLSIGAKQGTDMVKGGANQLPTSVQQLLNSPRPDLRHLNQLADIVKDGNHTF
CCEECCCCCHHCCCCCCCHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEE
QANTDLDRGMVKQASTLMNSPFWRAGEGGPGDLNPGIDPTVSNVLSAASPDHQVVHDAMT
EECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHH
TGDHDRFLQNLTHHSWQDHGQAVSSLFSWTGDATQGPEASIAAQTAHAYSTYIGHHQQDL
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH
LNLPGNHTLGQVNPNLVQGMAHGLGPYVDNIAGTTGGLPGFGDSLDNEGDTRSGALPVAK
HCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
GVFSVLNSDQAAGQYFNGQAYAHAVAHEAAFGNEPTHSGYDTQLYDAATLKGLVDVGTHN
HHHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
AYHANEVNGYHQQLSEYELKKQAYEAGLTGLGTVAGLPPGVGTVANPALNVLGHGLENSI
CCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHCCHHCCC
LGPAPSAPGENPIQPMDIGVADQGMANAMLAAGHNVQLPDGYVVYDDQHPHGRLATLDEA
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEHHHHH
RAKFPGLTASQYDGVIGPALSHAIALPPEEKMSPDEWMAIRYDNVVGVPHADQGRPK
HHHCCCCCHHHCCCCHHHHHHHHCCCCCHHCCCCCCEEEEEECCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]