| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is fur [H]
Identifier: 41409871
GI number: 41409871
Start: 4216834
End: 4217253
Strand: Reverse
Name: fur [H]
Synonym: MAP3773c
Alternate gene names: 41409871
Gene position: 4217253-4216834 (Counterclockwise)
Preceding gene: 41409872
Following gene: 41409870
Centisome position: 87.32
GC content: 62.86
Gene sequence:
>420_bases GTGTCATCGCCCGCTGCGCCCCGACGGCGACGCGCGACAGTCAAGCAGCGGACCGTCTTAGAGGTGCTGCGAGCGCAAGA GAACTTTCGAAGCGCCCAGCAGCTTTATCAGGACATTCGCCAGAACCAACAGCTCAGGATCGGCCTGACCAGTGTTTACC GCATCTTGCGCGCACTGGCTGCCGACCGGATCGCCGAGACTCAGCGCGCGGAGGACGGCGAGATCCTCTACCGCCTCCGC ACCGAGGCGGGCCATCGTCACTACCTGCTGTGCCGGCAGTGCGGCAGAGCCGTCGCCTTTACACCCGTCGACATCGAAGA ACACACCCGCCGGCTAAGCCGCCAACATCACTACGCCGACGTCACTCACTACGTCGACCTTTACGGCACATGTCCGCTTT GCCAAAACACACAACCGTGA
Upstream 100 bases:
>100_bases GAACGCCCCTCCCGCGCTTATGTCGTCCACCGAGCCCACCGCGACAACGCGGAAGTGACGAGTAAACACCTCGGATCCAG TTCGAAAAGGAGTATCACCG
Downstream 100 bases:
>100_bases GGACTCGGCGTTAGGAGCTTTGCGAGCGTTAATGAAAATGATTATCATTAACGCTTATGCCGCCACAGAGTTCTACGCCC CTCCCCGTCACCGTCCTATC
Product: hypothetical protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MSSPAAPRRRRATVKQRTVLEVLRAQENFRSAQQLYQDIRQNQQLRIGLTSVYRILRALAADRIAETQRAEDGEILYRLR TEAGHRHYLLCRQCGRAVAFTPVDIEEHTRRLSRQHHYADVTHYVDLYGTCPLCQNTQP
Sequences:
>Translated_139_residues MSSPAAPRRRRATVKQRTVLEVLRAQENFRSAQQLYQDIRQNQQLRIGLTSVYRILRALAADRIAETQRAEDGEILYRLR TEAGHRHYLLCRQCGRAVAFTPVDIEEHTRRLSRQHHYADVTHYVDLYGTCPLCQNTQP >Mature_138_residues SSPAAPRRRRATVKQRTVLEVLRAQENFRSAQQLYQDIRQNQQLRIGLTSVYRILRALAADRIAETQRAEDGEILYRLRT EAGHRHYLLCRQCGRAVAFTPVDIEEHTRRLSRQHHYADVTHYVDLYGTCPLCQNTQP
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulator for biosynthesis of the siderophore alcaligin E [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16230; Mature: 16098
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPAAPRRRRATVKQRTVLEVLRAQENFRSAQQLYQDIRQNQQLRIGLTSVYRILRALA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHH ADRIAETQRAEDGEILYRLRTEAGHRHYLLCRQCGRAVAFTPVDIEEHTRRLSRQHHYAD HHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHH VTHYVDLYGTCPLCQNTQP HHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SSPAAPRRRRATVKQRTVLEVLRAQENFRSAQQLYQDIRQNQQLRIGLTSVYRILRALA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHH ADRIAETQRAEDGEILYRLRTEAGHRHYLLCRQCGRAVAFTPVDIEEHTRRLSRQHHYAD HHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHH VTHYVDLYGTCPLCQNTQP HHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA