| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409860
Identifier: 41409860
GI number: 41409860
Start: 4199732
End: 4200958
Strand: Reverse
Name: 41409860
Synonym: MAP3762c
Alternate gene names: NA
Gene position: 4200958-4199732 (Counterclockwise)
Preceding gene: 41409861
Following gene: 41409859
Centisome position: 86.98
GC content: 62.92
Gene sequence:
>1227_bases ATGAAATTCGCTTTGGCCGTCTACGGCTCTCGCGGCGATGTCGAGCCCCATGCCGCAATCGCCCGAGAGCTGTTGCGTCG GGGACACGAAGTTTGTGTTGCAGCCCCGCCCGACCTGCGTGGCTTCGTCGAGTCGGCCGGTGTTACCGCGATCGACTATG GGCCGGACACGCGGGACGTGCTGTTTGGTAAGAAGACGAATCCGATCAAACTGCTGTCCACATCGAAGGAGTACTTCGGC CGAATCTGGCTGGAGATGGGGGAGACGCTGACATCACTGGCGAACGGGGCCGATCTATTGTTGACTGCCGTGGCGCAGCA GGGACTTGCTGCCAATGTCGCCGAATACTGCGACATCCCGCTCGCCACGTTGCATTGTCTGCCGGCCCGGGTCAACGGCC GGCTTCTCCCGAACGTTCCGTCGCCGTTGAGCCGCTTAGCGGTTTCGGCCTTCTGGTGCGGGTACTGGTGCGTGACGAAC AAGGCCGAGGAGAGCCAGCGCCGGCGATTGGGTCTGTCGAAGGCGAGCGGTTCCTCGACGCGCCGCATCGTGGGGCGTAA GTCTCTGGAGATCCAGGCATACGAGGATTTTCTCTTTCCCGGGCTAGCAGCCGAATGGGCGCACTGGGATGGTCAACGGC CCTTCGTCGGCGCGCTGACGCTGGGGTTACCGACGGACGCCGATGCCGAAGTCTTGTCGTGGATTGCCGCCGGATCACCG CCCGTCTATTTCGGCTTCGGGAGCCTACCGGTCAAATCACCAGCCGACACCGTCGCAATGATCAGCGCGGCCTGCACGCG ACTGGATGAGCGAGCGTTGATTTGCGCAGGCACCAATGACTTAACCCACGTCCCGCGCTCCGGCCACGTCAAGATCGTGG CGGCGATGAACCACGCGGCCATTTTTCCCGCCTGTCGCGCTGTCGTCCACCACGGCGGCGCCGGTACCACCGCCGCGGGC ATGCGAGCCGGAGTCCCCACGTTGGTCCTTTGGATGAGGAACGAGCAGCCGCTCTGGGGAGCTGCCGTCAAGCAGATGAA AGTCGGTTCTAGTCAACGTTTCTCGAAGACAACGGAGGAATCGCTGGCCACGTGCCTGCGCTCGATCCTCAGGCCTCACT ACATGACTCGGGCCCGCGAAGTAGCCAAAAGGATGACGAAATCCTCCGATAGCGCAGCGGTGGCCGCCGATCTTCTGGAG AATGCCGCTCGCGGGGAGACGACATAG
Upstream 100 bases:
>100_bases GGTTCTCGACGTGAGGCACGCAACGAATGGGCCGGTTCCAATTGGTCGCACCCCATGCAACGAGTGGCACAGCCTTTCGG CTGATGCCAAGGACCCGCAG
Downstream 100 bases:
>100_bases CCGATGGATACCGTTATCGCGATGGCGCTAATCGCGGCGACCAACCCGGTGCGTCTGGGCATCGCTCTTCTCTTGATTTC GCGGTCACGACCCGTGCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MKFALAVYGSRGDVEPHAAIARELLRRGHEVCVAAPPDLRGFVESAGVTAIDYGPDTRDVLFGKKTNPIKLLSTSKEYFG RIWLEMGETLTSLANGADLLLTAVAQQGLAANVAEYCDIPLATLHCLPARVNGRLLPNVPSPLSRLAVSAFWCGYWCVTN KAEESQRRRLGLSKASGSSTRRIVGRKSLEIQAYEDFLFPGLAAEWAHWDGQRPFVGALTLGLPTDADAEVLSWIAAGSP PVYFGFGSLPVKSPADTVAMISAACTRLDERALICAGTNDLTHVPRSGHVKIVAAMNHAAIFPACRAVVHHGGAGTTAAG MRAGVPTLVLWMRNEQPLWGAAVKQMKVGSSQRFSKTTEESLATCLRSILRPHYMTRAREVAKRMTKSSDSAAVAADLLE NAARGETT
Sequences:
>Translated_408_residues MKFALAVYGSRGDVEPHAAIARELLRRGHEVCVAAPPDLRGFVESAGVTAIDYGPDTRDVLFGKKTNPIKLLSTSKEYFG RIWLEMGETLTSLANGADLLLTAVAQQGLAANVAEYCDIPLATLHCLPARVNGRLLPNVPSPLSRLAVSAFWCGYWCVTN KAEESQRRRLGLSKASGSSTRRIVGRKSLEIQAYEDFLFPGLAAEWAHWDGQRPFVGALTLGLPTDADAEVLSWIAAGSP PVYFGFGSLPVKSPADTVAMISAACTRLDERALICAGTNDLTHVPRSGHVKIVAAMNHAAIFPACRAVVHHGGAGTTAAG MRAGVPTLVLWMRNEQPLWGAAVKQMKVGSSQRFSKTTEESLATCLRSILRPHYMTRAREVAKRMTKSSDSAAVAADLLE NAARGETT >Mature_408_residues MKFALAVYGSRGDVEPHAAIARELLRRGHEVCVAAPPDLRGFVESAGVTAIDYGPDTRDVLFGKKTNPIKLLSTSKEYFG RIWLEMGETLTSLANGADLLLTAVAQQGLAANVAEYCDIPLATLHCLPARVNGRLLPNVPSPLSRLAVSAFWCGYWCVTN KAEESQRRRLGLSKASGSSTRRIVGRKSLEIQAYEDFLFPGLAAEWAHWDGQRPFVGALTLGLPTDADAEVLSWIAAGSP PVYFGFGSLPVKSPADTVAMISAACTRLDERALICAGTNDLTHVPRSGHVKIVAAMNHAAIFPACRAVVHHGGAGTTAAG MRAGVPTLVLWMRNEQPLWGAAVKQMKVGSSQRFSKTTEESLATCLRSILRPHYMTRAREVAKRMTKSSDSAAVAADLLE NAARGETT
Specific function: Unknown
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 28 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6323218, Length=415, Percent_Identity=23.6144578313253, Blast_Score=92, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004276 - InterPro: IPR002213 [H]
Pfam domain/function: PF03033 Glyco_transf_28; PF00201 UDPGT [H]
EC number: NA
Molecular weight: Translated: 43794; Mature: 43794
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFALAVYGSRGDVEPHAAIARELLRRGHEVCVAAPPDLRGFVESAGVTAIDYGPDTRDV CCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCEEEECCCCCCCE LFGKKTNPIKLLSTSKEYFGRIWLEMGETLTSLANGADLLLTAVAQQGLAANVAEYCDIP EECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCCC LATLHCLPARVNGRLLPNVPSPLSRLAVSAFWCGYWCVTNKAEESQRRRLGLSKASGSST HHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHEECCCHHHHHHHHCCCCCCCCCCH RRIVGRKSLEIQAYEDFLFPGLAAEWAHWDGQRPFVGALTLGLPTDADAEVLSWIAAGSP HHHHCCCCEEEEEHHHHHCCCHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCC PVYFGFGSLPVKSPADTVAMISAACTRLDERALICAGTNDLTHVPRSGHVKIVAAMNHAA CEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEECCCHH IFPACRAVVHHGGAGTTAAGMRAGVPTLVLWMRNEQPLWGAAVKQMKVGSSQRFSKTTEE HHHHHHHHHHCCCCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHH SLATCLRSILRPHYMTRAREVAKRMTKSSDSAAVAADLLENAARGETT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKFALAVYGSRGDVEPHAAIARELLRRGHEVCVAAPPDLRGFVESAGVTAIDYGPDTRDV CCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCEEEECCCCCCCE LFGKKTNPIKLLSTSKEYFGRIWLEMGETLTSLANGADLLLTAVAQQGLAANVAEYCDIP EECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCCC LATLHCLPARVNGRLLPNVPSPLSRLAVSAFWCGYWCVTNKAEESQRRRLGLSKASGSST HHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHEECCCHHHHHHHHCCCCCCCCCCH RRIVGRKSLEIQAYEDFLFPGLAAEWAHWDGQRPFVGALTLGLPTDADAEVLSWIAAGSP HHHHCCCCEEEEEHHHHHCCCHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCC PVYFGFGSLPVKSPADTVAMISAACTRLDERALICAGTNDLTHVPRSGHVKIVAAMNHAA CEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEECCCHH IFPACRAVVHHGGAGTTAAGMRAGVPTLVLWMRNEQPLWGAAVKQMKVGSSQRFSKTTEE HHHHHHHHHHCCCCCCCHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHH SLATCLRSILRPHYMTRAREVAKRMTKSSDSAAVAADLLENAARGETT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]