| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409798
Identifier: 41409798
GI number: 41409798
Start: 4116757
End: 4117071
Strand: Reverse
Name: 41409798
Synonym: MAP3700c
Alternate gene names: NA
Gene position: 4117071-4116757 (Counterclockwise)
Preceding gene: 41409799
Following gene: 41409797
Centisome position: 85.24
GC content: 68.25
Gene sequence:
>315_bases TTGACTAGCACGCCGGGCACCACGGGCACGACCGAATTCGCCGAGCTGCACGACCTCATCGGCGGCCTGCGGCGGTGTGT GAGCTCCCTGCGGGCGCGCTACGGCGACAGCCCGGCGATGCGCCGCATCGTCATCGACGCCGACCGCATCCTGTCCGACG TCGACCTACTCGACACCGACGTATCCGAATTGGACCTGGCCCGCGCCACCGTGCAGCAGTCCGGTGAGAAGGTCGTCATC CCCGACACCCAGTACGACAGCGAATTCTGGCGCGACGTCGACGACGAGGGCGTCGGCGGCCACCACAGGTCCTGA
Upstream 100 bases:
>100_bases GCGTGCCGGTCGCGGGGCCGATGAACGCCTGACGCCCGGCGCGTGTCGTGGCTACTATCGGGGACGTACTGTGATCCGAA ACACTCCTCGACGAGATCCG
Downstream 100 bases:
>100_bases ACAACCCGGGCGCCCCCAGCCAGCCCCCCCGCAGAAGGGGGGCTCCGCATCTGTGTACCCTTCGACAGACAGCCCGTTCG AAGAGGAACAACCAGATGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MTSTPGTTGTTEFAELHDLIGGLRRCVSSLRARYGDSPAMRRIVIDADRILSDVDLLDTDVSELDLARATVQQSGEKVVI PDTQYDSEFWRDVDDEGVGGHHRS
Sequences:
>Translated_104_residues MTSTPGTTGTTEFAELHDLIGGLRRCVSSLRARYGDSPAMRRIVIDADRILSDVDLLDTDVSELDLARATVQQSGEKVVI PDTQYDSEFWRDVDDEGVGGHHRS >Mature_103_residues TSTPGTTGTTEFAELHDLIGGLRRCVSSLRARYGDSPAMRRIVIDADRILSDVDLLDTDVSELDLARATVQQSGEKVVIP DTQYDSEFWRDVDDEGVGGHHRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11464; Mature: 11333
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTPGTTGTTEFAELHDLIGGLRRCVSSLRARYGDSPAMRRIVIDADRILSDVDLLDTD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC VSELDLARATVQQSGEKVVIPDTQYDSEFWRDVDDEGVGGHHRS HHHHHHHHHHHHHCCCEEECCCCCCCHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TSTPGTTGTTEFAELHDLIGGLRRCVSSLRARYGDSPAMRRIVIDADRILSDVDLLDTD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC VSELDLARATVQQSGEKVVIPDTQYDSEFWRDVDDEGVGGHHRS HHHHHHHHHHHHHCCCEEECCCCCCCHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230 [H]