| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is mrp
Identifier: 41408651
GI number: 41408651
Start: 2871210
End: 2872370
Strand: Direct
Name: mrp
Synonym: MAP2553
Alternate gene names: 41408651
Gene position: 2871210-2872370 (Clockwise)
Preceding gene: 41408650
Following gene: 41408656
Centisome position: 59.45
GC content: 72.01
Gene sequence:
>1161_bases GTGATGTCCCGCCATGACTCCTCCGACTCAGCAGCCGACCTGAGCGCCGCCGTCCGCGCCGCCCTGGGCAAGGTGATCGA CCCCGAACTGCGGCGTCCGATCACCGAACTCGGGATGGTCAAGAGCATCGACACCGAGCCCGACGGCGCGGTGCATGTCG CGATCTACCTGACCACGGCCGCGTGCCCGAAGAAGACCGAGATCAGCGACCGGGTCACCCGGGCGGTCGCCGACGTCCCG GGCACCGGCGCGGTCAAGGTCACCCTGGACGTGATGAGCGACGAGCAGCGCACCGAGCTGCGCAAGCAGCTGCGCGGCGA TGCCCGCGAGCCGGTTATCCCGTTCGCGCAACCGAATTCGCTGACCCGGGTCTACGCGGTCGCGTCCGGCAAGGGCGGGG TGGGAAAGTCCACCGTCACCGTCAACCTGGCGGCGGCGATGGCCGCCCGCGGCCTGTCGGTCGGCGTGCTGGACGCCGAC ATCCACGGCCATTCCATCCCGCGGATGATGGGCACCACCGACCGGCCCACCCAGGTCGAGTCGATGATCCTGCCGCCCAT CGCCCACGACGTGCGGGTCATCTCGATCGCCCAGTTCACCCAGGGAAACACCCCGGTCGTGTGGCGCGGCCCGATGCTGC ACCGGGCGCTGCAGCAGTTCCTGGCCGACGTCTACTGGGGCGACCTGGACGTGCTGCTGCTCGACCTGCCGCCGGGCACC GGTGACATCGCCATTTCGGTGGCCCAGCTGATTCCCAACGCCGAGATCCTGGTGGTGACGACGCCGCAGCTGGCCGCCGC CGAGGTGGCCGAGCGGGCCGGCAGCATCGCGCTGCAGACCCGCCAGCGGGTGGTCGGTGTGGTGGAGAACATGTCGGGGC TCACCCTGCCGGACGGCTCCACGTTGCAGGTGTTCGGCGAGGGCGGCGGCCAGCAGGTGGCCGAGCGGCTGTCCCGGGCG GTCGGCGCCGAGGTGCCGCTGCTGGGTCAGATCCCGCTGGACCCCGCGCTGGTGGAGGCGGGCGATTCCGGTACCCCGCT GGTGCTCAGCGCGCCGGATTCGCCGGTGGGCAAGGCGCTGCGCGCGGTGGCCGACAGCCTGTCGTCGCGCCGGCGCGGAC TGGCCGGGGTGTCGCTGGGGCTCGACCCCACCCGGCGCTGA
Upstream 100 bases:
>100_bases GGCCGGCCCCGCGCCGAACGCGCCGAAGAAGCCGGGCCCGGTCTAGCCGGCCCGCAGGGTCGCCGCCCGACGGCACCCGG CCACCCGCCTACACTCGGCG
Downstream 100 bases:
>100_bases CGGTTCAGGTGGCGTCGGCGTCGAACGGCGTCTGGCCGGAGCGGTGCGGCTCGGGCGGTGGCGCCGGGGCGGGCGGCGGC TGGGCCGCGGCGCCGTTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MMSRHDSSDSAADLSAAVRAALGKVIDPELRRPITELGMVKSIDTEPDGAVHVAIYLTTAACPKKTEISDRVTRAVADVP GTGAVKVTLDVMSDEQRTELRKQLRGDAREPVIPFAQPNSLTRVYAVASGKGGVGKSTVTVNLAAAMAARGLSVGVLDAD IHGHSIPRMMGTTDRPTQVESMILPPIAHDVRVISIAQFTQGNTPVVWRGPMLHRALQQFLADVYWGDLDVLLLDLPPGT GDIAISVAQLIPNAEILVVTTPQLAAAEVAERAGSIALQTRQRVVGVVENMSGLTLPDGSTLQVFGEGGGQQVAERLSRA VGAEVPLLGQIPLDPALVEAGDSGTPLVLSAPDSPVGKALRAVADSLSSRRRGLAGVSLGLDPTRR
Sequences:
>Translated_386_residues MMSRHDSSDSAADLSAAVRAALGKVIDPELRRPITELGMVKSIDTEPDGAVHVAIYLTTAACPKKTEISDRVTRAVADVP GTGAVKVTLDVMSDEQRTELRKQLRGDAREPVIPFAQPNSLTRVYAVASGKGGVGKSTVTVNLAAAMAARGLSVGVLDAD IHGHSIPRMMGTTDRPTQVESMILPPIAHDVRVISIAQFTQGNTPVVWRGPMLHRALQQFLADVYWGDLDVLLLDLPPGT GDIAISVAQLIPNAEILVVTTPQLAAAEVAERAGSIALQTRQRVVGVVENMSGLTLPDGSTLQVFGEGGGQQVAERLSRA VGAEVPLLGQIPLDPALVEAGDSGTPLVLSAPDSPVGKALRAVADSLSSRRRGLAGVSLGLDPTRR >Mature_386_residues MMSRHDSSDSAADLSAAVRAALGKVIDPELRRPITELGMVKSIDTEPDGAVHVAIYLTTAACPKKTEISDRVTRAVADVP GTGAVKVTLDVMSDEQRTELRKQLRGDAREPVIPFAQPNSLTRVYAVASGKGGVGKSTVTVNLAAAMAARGLSVGVLDAD IHGHSIPRMMGTTDRPTQVESMILPPIAHDVRVISIAQFTQGNTPVVWRGPMLHRALQQFLADVYWGDLDVLLLDLPPGT GDIAISVAQLIPNAEILVVTTPQLAAAEVAERAGSIALQTRQRVVGVVENMSGLTLPDGSTLQVFGEGGGQQVAERLSRA VGAEVPLLGQIPLDPALVEAGDSGTPLVLSAPDSPVGKALRAVADSLSSRRRGLAGVSLGLDPTRR
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI6912540, Length=265, Percent_Identity=39.2452830188679, Blast_Score=160, Evalue=1e-39, Organism=Homo sapiens, GI157384956, Length=272, Percent_Identity=38.6029411764706, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI118572611, Length=247, Percent_Identity=35.6275303643725, Blast_Score=144, Evalue=1e-34, Organism=Escherichia coli, GI87082045, Length=372, Percent_Identity=34.9462365591398, Blast_Score=182, Evalue=3e-47, Organism=Caenorhabditis elegans, GI25143050, Length=256, Percent_Identity=37.5, Blast_Score=144, Evalue=6e-35, Organism=Saccharomyces cerevisiae, GI6322188, Length=250, Percent_Identity=36.4, Blast_Score=152, Evalue=7e-38, Organism=Saccharomyces cerevisiae, GI6321347, Length=270, Percent_Identity=32.962962962963, Blast_Score=132, Evalue=9e-32, Organism=Drosophila melanogaster, GI221511043, Length=247, Percent_Identity=35.2226720647773, Blast_Score=159, Evalue=2e-39, Organism=Drosophila melanogaster, GI24667611, Length=260, Percent_Identity=33.8461538461538, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI19921440, Length=235, Percent_Identity=37.8723404255319, Blast_Score=103, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR002744 - InterPro: IPR000808 [H]
Pfam domain/function: PF01883 DUF59; PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 40409; Mature: 40409
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: PS01215 MRP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSRHDSSDSAADLSAAVRAALGKVIDPELRRPITELGMVKSIDTEPDGAVHVAIYLTTA CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCHHHHCCHHCCCCCCCCEEEEEEEEEEC ACPKKTEISDRVTRAVADVPGTGAVKVTLDVMSDEQRTELRKQLRGDAREPVIPFAQPNS CCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCC LTRVYAVASGKGGVGKSTVTVNLAAAMAARGLSVGVLDADIHGHSIPRMMGTTDRPTQVE CEEEEEEECCCCCCCCCEEEEEHHHHHHHCCCEEEEEEECCCCCCCHHHCCCCCCCCHHH SMILPPIAHDVRVISIAQFTQGNTPVVWRGPMLHRALQQFLADVYWGDLDVLLLDLPPGT HHCCCCCCCCEEEEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHCCCEEEEEEECCCCC GDIAISVAQLIPNAEILVVTTPQLAAAEVAERAGSIALQTRQRVVGVVENMSGLTLPDGS CHHEEEHHHHCCCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC TLQVFGEGGGQQVAERLSRAVGAEVPLLGQIPLDPALVEAGDSGTPLVLSAPDSPVGKAL EEEEEECCCHHHHHHHHHHHHCCCCCEEECCCCCHHHEECCCCCCEEEEECCCCHHHHHH RAVADSLSSRRRGLAGVSLGLDPTRR HHHHHHHHHHHCCCCEEEECCCCCCC >Mature Secondary Structure MMSRHDSSDSAADLSAAVRAALGKVIDPELRRPITELGMVKSIDTEPDGAVHVAIYLTTA CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCHHHHCCHHCCCCCCCCEEEEEEEEEEC ACPKKTEISDRVTRAVADVPGTGAVKVTLDVMSDEQRTELRKQLRGDAREPVIPFAQPNS CCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCC LTRVYAVASGKGGVGKSTVTVNLAAAMAARGLSVGVLDADIHGHSIPRMMGTTDRPTQVE CEEEEEEECCCCCCCCCEEEEEHHHHHHHCCCEEEEEEECCCCCCCHHHCCCCCCCCHHH SMILPPIAHDVRVISIAQFTQGNTPVVWRGPMLHRALQQFLADVYWGDLDVLLLDLPPGT HHCCCCCCCCEEEEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHCCCEEEEEEECCCCC GDIAISVAQLIPNAEILVVTTPQLAAAEVAERAGSIALQTRQRVVGVVENMSGLTLPDGS CHHEEEHHHHCCCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC TLQVFGEGGGQQVAERLSRAVGAEVPLLGQIPLDPALVEAGDSGTPLVLSAPDSPVGKAL EEEEEECCCHHHHHHHHHHHHCCCCCEEECCCCCHHHEECCCCCCEEEEECCCCHHHHHH RAVADSLSSRRRGLAGVSLGLDPTRR HHHHHHHHHHHCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]