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The map label for this gene is oppC

Identifier: 41408587

GI number: 41408587

Start: 2792582

End: 2793457

Strand: Direct

Name: oppC

Synonym: MAP2489

Alternate gene names: 41408587

Gene position: 2792582-2793457 (Clockwise)

Preceding gene: 41408586

Following gene: 41408588

Centisome position: 57.82

GC content: 66.78

Gene sequence:

>876_bases
GTGGCGGGCTTCGCCTCGCGGCGCACGCTCGTGCTGCGCAGGTTCGGCCGCAACCGGTTGGCGGTGGCCTCGCTGACGCT
GTTGGTGCTGTTGTTCGTCGGCTGCTACACGCTGCCCGCGGTGCTCCCGTATTCCTATCAGGACCTTGATTTCGACGCGC
TGCTGCAGCCGCCGAACGCGCGCCACTGGCTGGGCACCAACGCGTTGGGTCAGGACCTGCTGGCGCAGATCCTGCGCGGG
ATGCAGAAGTCGATGCTGATCGGTGTCTGCGTCGCGGTCATCTCCACCGGCATCGCCGCCACCGTCGGCTCGATCGCCGG
CTATTTCGGTGGCTGGCGCGACCGGGTGCTGATGTGGCTGGTGGACCTGCTGTTGGTGGTGCCCAGCTTCATCCTCATCG
CCATCGTGACGCCGCGCACCAAGAACTCCGCCAATATCCTGATGCTCGTCCTGCTGCTGGCCGGGTTCGGCTGGATGGTC
AGCTCGCGCATGGTGCGGGGCATGACGATGAGCCTGCGCGAGCGCGAATTCATCCGGGCGGCAAGGTATATGGGTGTGTC
CAGCCGTCGTATCATCGTCGGGCATGTGGTGCCGAATGTGGCGTCCATCCTGATCATCGACGCCGCGCTCAACGTCGCCT
CGGCCATCCTGGCCGAAACAGGTTTGAGTTTCCTGGGTTTCGGTGTCCAGCCGCCGGACGTGTCGCTGGGGACGTTGATC
GCCAACGGCACCCAGTCGGCGACCACCTTTCCGTGGGTGTTCTTGTTTCCCGCCGGCGTCCTGGTGCTGATCCTGGTGTG
CGCCAACCTGACCGGCGACGGCCTGCGCGACGCGCTGGACCCCGGCAGCGGGCCGGCCCGCGGTGGTCGCCGGTGA

Upstream 100 bases:

>100_bases
TGCTCTCGGACGTGTTCTACGCCGCTCTTGATCCGCGGGTCCGGGTGTCATGACCGCCCAGGCGAATGTCGATGGCGCTC
ACGGCTTTTCGGGCCACGAA

Downstream 100 bases:

>100_bases
GCCCGCTGCTGCAGGTGACCGACCTGGCCGTCACCTTCCCGGCCGGCGATGCGCCGGTGACCGCGGTGCGCGGCGTCAGC
TATCGCATCGAACCGGGGGA

Product: hypothetical protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MAGFASRRTLVLRRFGRNRLAVASLTLLVLLFVGCYTLPAVLPYSYQDLDFDALLQPPNARHWLGTNALGQDLLAQILRG
MQKSMLIGVCVAVISTGIAATVGSIAGYFGGWRDRVLMWLVDLLLVVPSFILIAIVTPRTKNSANILMLVLLLAGFGWMV
SSRMVRGMTMSLREREFIRAARYMGVSSRRIIVGHVVPNVASILIIDAALNVASAILAETGLSFLGFGVQPPDVSLGTLI
ANGTQSATTFPWVFLFPAGVLVLILVCANLTGDGLRDALDPGSGPARGGRR

Sequences:

>Translated_291_residues
MAGFASRRTLVLRRFGRNRLAVASLTLLVLLFVGCYTLPAVLPYSYQDLDFDALLQPPNARHWLGTNALGQDLLAQILRG
MQKSMLIGVCVAVISTGIAATVGSIAGYFGGWRDRVLMWLVDLLLVVPSFILIAIVTPRTKNSANILMLVLLLAGFGWMV
SSRMVRGMTMSLREREFIRAARYMGVSSRRIIVGHVVPNVASILIIDAALNVASAILAETGLSFLGFGVQPPDVSLGTLI
ANGTQSATTFPWVFLFPAGVLVLILVCANLTGDGLRDALDPGSGPARGGRR
>Mature_290_residues
AGFASRRTLVLRRFGRNRLAVASLTLLVLLFVGCYTLPAVLPYSYQDLDFDALLQPPNARHWLGTNALGQDLLAQILRGM
QKSMLIGVCVAVISTGIAATVGSIAGYFGGWRDRVLMWLVDLLLVVPSFILIAIVTPRTKNSANILMLVLLLAGFGWMVS
SRMVRGMTMSLREREFIRAARYMGVSSRRIIVGHVVPNVASILIIDAALNVASAILAETGLSFLGFGVQPPDVSLGTLIA
NGTQSATTFPWVFLFPAGVLVLILVCANLTGDGLRDALDPGSGPARGGRR

Specific function: Part Of The Binding-Protein-Dependent Transport System For Oligopeptides; Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=272, Percent_Identity=41.5441176470588, Blast_Score=175, Evalue=3e-45,
Organism=Escherichia coli, GI1787054, Length=271, Percent_Identity=34.3173431734317, Blast_Score=166, Evalue=2e-42,
Organism=Escherichia coli, GI1787760, Length=265, Percent_Identity=33.2075471698113, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI1789889, Length=240, Percent_Identity=31.6666666666667, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1789964, Length=251, Percent_Identity=35.8565737051793, Blast_Score=117, Evalue=7e-28,
Organism=Escherichia coli, GI1788505, Length=231, Percent_Identity=31.6017316017316, Blast_Score=110, Evalue=7e-26,
Organism=Escherichia coli, GI1787549, Length=234, Percent_Identity=30.3418803418803, Blast_Score=95, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31225; Mature: 31093

Theoretical pI: Translated: 11.16; Mature: 11.16

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGFASRRTLVLRRFGRNRLAVASLTLLVLLFVGCYTLPAVLPYSYQDLDFDALLQPPNA
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCC
RHWLGTNALGQDLLAQILRGMQKSMLIGVCVAVISTGIAATVGSIAGYFGGWRDRVLMWL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VDLLLVVPSFILIAIVTPRTKNSANILMLVLLLAGFGWMVSSRMVRGMTMSLREREFIRA
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARYMGVSSRRIIVGHVVPNVASILIIDAALNVASAILAETGLSFLGFGVQPPDVSLGTLI
HHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHE
ANGTQSATTFPWVFLFPAGVLVLILVCANLTGDGLRDALDPGSGPARGGRR
ECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AGFASRRTLVLRRFGRNRLAVASLTLLVLLFVGCYTLPAVLPYSYQDLDFDALLQPPNA
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCC
RHWLGTNALGQDLLAQILRGMQKSMLIGVCVAVISTGIAATVGSIAGYFGGWRDRVLMWL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VDLLLVVPSFILIAIVTPRTKNSANILMLVLLLAGFGWMVSSRMVRGMTMSLREREFIRA
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARYMGVSSRRIIVGHVVPNVASILIIDAALNVASAILAETGLSFLGFGVQPPDVSLGTLI
HHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHE
ANGTQSATTFPWVFLFPAGVLVLILVCANLTGDGLRDALDPGSGPARGGRR
ECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]