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The map label for this gene is yqjQ [H]

Identifier: 41408416

GI number: 41408416

Start: 2599661

End: 2600467

Strand: Direct

Name: yqjQ [H]

Synonym: MAP2318

Alternate gene names: 41408416

Gene position: 2599661-2600467 (Clockwise)

Preceding gene: 41408414

Following gene: 41408418

Centisome position: 53.83

GC content: 70.51

Gene sequence:

>807_bases
ATGCCGATCCCCGCTCCCAGCCCCGAGGCGCGCGCGGTTGTCACCGGAGCGTCGCAGAACATCGGTGAAGCGCTCGCCAC
CGAACTCGCCGCCCGCGGGCACCATCTGATCGTCACCGCGCGACGGGAGGACCTGCTCAAGGACCTGGCCGCCCGGCTGA
CCGAGAAGTACCGGGTCACCGTCGAGGTGCGCCCGGCCGATCTGGCCGACGCGGGTGAGCGCGCCACCCTGTGCGACGAG
CTGGCCGCGCGGACCATCTCGGTGTTGTGCGCCAACGCCGGCACCGCAACCTTCGGTCCCGTCGCCACCCTCGACCCGGC
CGGCGAGAAGGCCCAGGTGCAACTGAATGTCCTTGGGGTGCATGACCTTACGCTGGCGGTGCTGCCCGGCATGGTGGAGC
GCCGCGCCGGCGGCATCCTGATTTCCGGTTCGGCGGCCGGCAACTCGCCGATCCCCTACAACGCCACCTACGCGGCCACC
AAGGCCTTCGTCAACACGTTCAGCGAGTCGCTGCGCGGGGAACTCCGCGGCTCCGGGGTGCATGTGACGCTGTTGGCGCC
CGGCCCGGTGCGCACCGACCTGCCCGACGACGCCGAGGCCTCGATCGTCGAGCGGCTGGTGCCCGACTTCTTGTGGATCT
CCACCGAGCACACCGCCCGGGTGTCGCTGGATGCGTTGGGCCGCAACAAGATGCGCGTCGTGCCCGGTCTGACGTCCAAG
GCCATGTCGGTGGCCAGCGGGTATGCCCCGCGCGCCATCGTGGCGCCCATTGTGGGCAGCTTCTACAAGAAGCTCGGCGG
CGGGTAG

Upstream 100 bases:

>100_bases
GGGCGGCGGCACGCGACTCCGGCTGGCTCATGCCCGGCAACTCTATCGGCGCCGGCGATCGCCTGCCGATCGCCGTTCGC
GCGCTGTCTACGATTGGCGC

Downstream 100 bases:

>100_bases
GCGTTACTTGCGGCGACGGCCTCCGCCGCCGAACTTGAGCCGAATGATCTCCCGGATCCCGGTGTTCACCGCGCTCTGTA
CGTCGCGGTCGTGCCAGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MPIPAPSPEARAVVTGASQNIGEALATELAARGHHLIVTARREDLLKDLAARLTEKYRVTVEVRPADLADAGERATLCDE
LAARTISVLCANAGTATFGPVATLDPAGEKAQVQLNVLGVHDLTLAVLPGMVERRAGGILISGSAAGNSPIPYNATYAAT
KAFVNTFSESLRGELRGSGVHVTLLAPGPVRTDLPDDAEASIVERLVPDFLWISTEHTARVSLDALGRNKMRVVPGLTSK
AMSVASGYAPRAIVAPIVGSFYKKLGGG

Sequences:

>Translated_268_residues
MPIPAPSPEARAVVTGASQNIGEALATELAARGHHLIVTARREDLLKDLAARLTEKYRVTVEVRPADLADAGERATLCDE
LAARTISVLCANAGTATFGPVATLDPAGEKAQVQLNVLGVHDLTLAVLPGMVERRAGGILISGSAAGNSPIPYNATYAAT
KAFVNTFSESLRGELRGSGVHVTLLAPGPVRTDLPDDAEASIVERLVPDFLWISTEHTARVSLDALGRNKMRVVPGLTSK
AMSVASGYAPRAIVAPIVGSFYKKLGGG
>Mature_267_residues
PIPAPSPEARAVVTGASQNIGEALATELAARGHHLIVTARREDLLKDLAARLTEKYRVTVEVRPADLADAGERATLCDEL
AARTISVLCANAGTATFGPVATLDPAGEKAQVQLNVLGVHDLTLAVLPGMVERRAGGILISGSAAGNSPIPYNATYAATK
AFVNTFSESLRGELRGSGVHVTLLAPGPVRTDLPDDAEASIVERLVPDFLWISTEHTARVSLDALGRNKMRVVPGLTSKA
MSVASGYAPRAIVAPIVGSFYKKLGGG

Specific function: Unknown

COG id: COG0300

COG function: function code R; Short-chain dehydrogenases of various substrate specificities

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7705855, Length=187, Percent_Identity=36.3636363636364, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI226371731, Length=186, Percent_Identity=31.1827956989247, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI20149619, Length=197, Percent_Identity=29.4416243654822, Blast_Score=85, Evalue=8e-17,
Organism=Homo sapiens, GI7706318, Length=200, Percent_Identity=32.5, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI4557649, Length=202, Percent_Identity=27.7227722772277, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI7657478, Length=185, Percent_Identity=31.3513513513514, Blast_Score=78, Evalue=7e-15,
Organism=Homo sapiens, GI223718074, Length=187, Percent_Identity=31.5508021390374, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI40548397, Length=228, Percent_Identity=27.1929824561404, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI214010158, Length=228, Percent_Identity=27.1929824561404, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI214010156, Length=228, Percent_Identity=27.1929824561404, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI22758144, Length=228, Percent_Identity=27.1929824561404, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI32455239, Length=202, Percent_Identity=29.2079207920792, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI5031765, Length=202, Percent_Identity=29.2079207920792, Blast_Score=68, Evalue=7e-12,
Organism=Escherichia coli, GI1786701, Length=204, Percent_Identity=30.8823529411765, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787820, Length=185, Percent_Identity=36.2162162162162, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI87082100, Length=207, Percent_Identity=33.3333333333333, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787335, Length=201, Percent_Identity=30.3482587064677, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1786812, Length=205, Percent_Identity=29.2682926829268, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI25152911, Length=206, Percent_Identity=33.9805825242718, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI212646214, Length=208, Percent_Identity=30.2884615384615, Blast_Score=81, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17560176, Length=262, Percent_Identity=26.7175572519084, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17559552, Length=227, Percent_Identity=27.7533039647577, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17570069, Length=223, Percent_Identity=26.457399103139, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6319635, Length=234, Percent_Identity=26.9230769230769, Blast_Score=79, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6323882, Length=192, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6322067, Length=195, Percent_Identity=29.7435897435897, Blast_Score=66, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24640442, Length=200, Percent_Identity=34.5, Blast_Score=100, Evalue=8e-22,
Organism=Drosophila melanogaster, GI161076933, Length=187, Percent_Identity=35.8288770053476, Blast_Score=95, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24584748, Length=187, Percent_Identity=35.8288770053476, Blast_Score=95, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24584744, Length=187, Percent_Identity=34.2245989304813, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI28574402, Length=187, Percent_Identity=34.2245989304813, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24649181, Length=187, Percent_Identity=30.4812834224599, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21358495, Length=198, Percent_Identity=32.3232323232323, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24580925, Length=194, Percent_Identity=31.9587628865979, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI116007236, Length=195, Percent_Identity=29.7435897435897, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24584752, Length=188, Percent_Identity=31.3829787234043, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24641232, Length=209, Percent_Identity=29.1866028708134, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24641388, Length=223, Percent_Identity=31.8385650224215, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI116007238, Length=204, Percent_Identity=26.9607843137255, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27920; Mature: 27789

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIPAPSPEARAVVTGASQNIGEALATELAARGHHLIVTARREDLLKDLAARLTEKYRVT
CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHCEEEE
VEVRPADLADAGERATLCDELAARTISVLCANAGTATFGPVATLDPAGEKAQVQLNVLGV
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCEEEEEEEEEE
HDLTLAVLPGMVERRAGGILISGSAAGNSPIPYNATYAATKAFVNTFSESLRGELRGSGV
HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE
HVTLLAPGPVRTDLPDDAEASIVERLVPDFLWISTEHTARVSLDALGRNKMRVVPGLTSK
EEEEECCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCCEEEEHHHCCCCCEEEECCCCHH
AMSVASGYAPRAIVAPIVGSFYKKLGGG
HHHHHCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PIPAPSPEARAVVTGASQNIGEALATELAARGHHLIVTARREDLLKDLAARLTEKYRVT
CCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHCEEEE
VEVRPADLADAGERATLCDELAARTISVLCANAGTATFGPVATLDPAGEKAQVQLNVLGV
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCEEEEEEEEEE
HDLTLAVLPGMVERRAGGILISGSAAGNSPIPYNATYAATKAFVNTFSESLRGELRGSGV
HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE
HVTLLAPGPVRTDLPDDAEASIVERLVPDFLWISTEHTARVSLDALGRNKMRVVPGLTSK
EEEEECCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCCEEEEHHHCCCCCEEEECCCCHH
AMSVASGYAPRAIVAPIVGSFYKKLGGG
HHHHHCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]