Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is malL [H]

Identifier: 41408390

GI number: 41408390

Start: 2561279

End: 2563600

Strand: Direct

Name: malL [H]

Synonym: MAP2292

Alternate gene names: 41408390

Gene position: 2561279-2563600 (Clockwise)

Preceding gene: 41408389

Following gene: 41408400

Centisome position: 53.03

GC content: 68.82

Gene sequence:

>2322_bases
GTGATGTCAGCCCACGAAGTGATGTCAGCCCACGAAACCGAGCGGGGTGCAATGCAATCCAAGCCGTGGTGGTCGAGCGC
GGTGTTCTATCAGGTGTATCCGAGGTCGTTCGCCGACAGCGACGGCGACGGCGTGGGCGACATCGACGGGGTGACGGCGC
ATCTGGACCACCTCGAGCAACTGGGGGTCGACGCGATCTGGCTCAATCCGGTCACCGTCTCCCCGATGGCCGACCACGGC
TACGACGTCGCCGACCCGCGCGACATCGACCCGCTGTTCGGCGGGATGGCCGCGATCGAACGGCTGATCGCCGCGGCGCA
CCGGCGGGGCATCAAGATCACCATGGACGTGGTGCCCAACCACACCAGCTCGGCGCATCCGTGGTTCCAGGCGGCGCTGG
CCGCCGGACCGGGTTCCGACGCCCGGCAGCGCTACTTCTTCCGGGACGGCCGCGGCGCGGACGGCGAGCTGCCGCCGAAC
AACTGGACCTCGGTGTTCGGCGGGTCGGCCTGGACCCGGGTGCTCGAACCCGACGGCAATCCCGGCCAGTGGTATCTGCA
CCTGTTCGACACCGAGCAGCCCGACCTGAACTGGGAGCACCCGGACGTCTTCGACGACTTCGAGAAGACGCTGCGGTTCT
GGCTGGAGCGCGGCGTGGACGGCTTCCGCATCGACGTGGCGCACGGCATGGCCAAACCGGCCGGCCTGCCGGATTCGCCG
GACCTCGAGTCCAAGGTGTTGCACCACAGCGACGACGACCCGCGCTTCAACCACCCGAGCGTGCACGACATCCACCGCGA
CATCCGCAAGGTGGTCAACGACTACCCCGGCGCGGTGACCGTCGGCGAGGTGTGGGTCACCGACAACGCCCGCTGGGCGG
AGTACCTGCGGCCCGACGAACTGCATCTGGGGTTCAACTTCCGGCTGACCAAGATCGACTTCGACGCCGTCCAGATCCAC
GACGCGATCCAGAACTCGCTGGCCGCCACCGCCCTGCAGGAGGCCACCCCGACCTGGACGCTGTCCAACCACGACGTCGG
CCGGGAGGTCACCCGCTACGGCGGCGGCGAGGTCGGGCTGCGCCGGGCCCGTGCGATGGCGATGGTGATGCTCGCCCTGC
CCGGCGCGGTGTTCATCTACAACGGCGAGGAGCTGGGCCTGCCCGACGTCGAGTTGCCCGACGAGGTGTTGCAGGACCCC
ACCTGGGAGCGCTCGGGACACACCGAGCGGGGCCGGGACAAATGCCGGGTGCCGATGCCCTGGTCGGGCCAGGCTCCCCC
GTTCGGGTTCTCCTCGCGCACCGACACCTGGCTGCCGATGCCGAAGGAGTGGGCGGCGCTGACCGTGCAAAAGCAGCGCG
ACGACCCCGACTCGACGTTGTCGTTCTTCCGGCGGGCCCTCGAATTGCGAAGGCGCCGTGTGGAATTCGACGGCGACGGC
GTCGAATTGGCTGGAGGCGACCGCCGATGCGGTGACGTTCCGGCGTCCCGGCGGGCTGGTGTGCGCCCTCAACAGCGGCG
AGCAGCCCGTGCCGCTGCCGCCGGGCGAACTGGTGCTGGCGAGCGCGCCGCTGCTGGACGGGAAGCTGCCCCCGGACGCG
GCGGCCTGGCTGGCCTAGCGGCGCGACCGGGGCGAGCGTTTCGCCGCCCGCTGCTCTATATGTTGACCCATGGCTTGCTA
CGAGTGGACAGTGATCGGCGCCGGCCCGGCGGGCATCGCGGCGGTGGGCCGGCTGCTCGATCACGGGGCGGACAGCATCG
CCTGGATCGACCCCGCCTTCGCCGCCGGAGACATCGGCCAGAAGTGGCGATCGGTGTCCAGCAACACGCACGCCGGGCTG
TTTCTCGAATATTTCAACGGCTGCAAGTCATTTCGGTTCTCCGAGGCACCGCCCATGCCGCTGCGGGAAATCGACGCCGG
CGAAACCTGCGCGCTGGCGCTGGTGGCCGAACCCCTGCTGTGGGTCACCGGGCAGCTGCGCGAGCGGGTCGACACCGTCA
CCACCACCGCCACCGCGCTGTACCTGTCGGACCGGCGGTGGCGGATCGAGACCGAGCAGCGCGAGATCTTCTCCCGGAAC
GTGATCCTGGCCGTCGGGGCGGTGCCCAAAAAGCTTTGCCACCCCGGCCTGGAGGAGATTCCGGTGGAAGTCGCGCTGGA
TCCCGAAAAGCTCGCGCGCCAATCGCTTTCCGGGGCGACGGTGGGCGTGTTCGGTTCATCGCACTCGTCGATGATCGTGC
TGCCCAACCTGCTGCGCCAGCCGGTCGAAAAGGTGATCAACTTCTACCGGAGCCCGCTGAAATACGCTGTCTACTTCGAT
GA

Upstream 100 bases:

>100_bases
CGGTGGCGTCGATCGACTCGAAGACTCTGGACGACGAGCACCGTCGCGAGCTGCTCGACTATCTGGAGATGGCCGCGCAC
TCGCTGGTGAATTCTCCGTT

Downstream 100 bases:

>100_bases
TTGGATTCTCTTCGACGACACCGGCCTGAAGGGCCAGGCCGCGGTGTGGGCGCGGGAGAACATCGACGGGGTGCTGCCGG
AACGGCTGCACCGGTGTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Dextrin 6-alpha-D-glucanohydrolase; Oligosaccharide alpha-1,6-glucosidase; Sucrase-isomaltase; Isomaltase [H]

Number of amino acids: Translated: 773; Mature: 773

Protein sequence:

>773_residues
MMSAHEVMSAHETERGAMQSKPWWSSAVFYQVYPRSFADSDGDGVGDIDGVTAHLDHLEQLGVDAIWLNPVTVSPMADHG
YDVADPRDIDPLFGGMAAIERLIAAAHRRGIKITMDVVPNHTSSAHPWFQAALAAGPGSDARQRYFFRDGRGADGELPPN
NWTSVFGGSAWTRVLEPDGNPGQWYLHLFDTEQPDLNWEHPDVFDDFEKTLRFWLERGVDGFRIDVAHGMAKPAGLPDSP
DLESKVLHHSDDDPRFNHPSVHDIHRDIRKVVNDYPGAVTVGEVWVTDNARWAEYLRPDELHLGFNFRLTKIDFDAVQIH
DAIQNSLAATALQEATPTWTLSNHDVGREVTRYGGGEVGLRRARAMAMVMLALPGAVFIYNGEELGLPDVELPDEVLQDP
TWERSGHTERGRDKCRVPMPWSGQAPPFGFSSRTDTWLPMPKEWAALTVQKQRDDPDSTLSFFRRALELRRRRVEFDGDG
VELAGGDRRCGDVPASRRAGVRPQQRRAARAAAAGRTGAGERAAAGREAAPGRGGLAGLAARPGRAFRRPLLYMLTHGLL
RVDSDRRRPGGHRGGGPAARSRGGQHRLDRPRLRRRRHRPEVAIGVQQHARRAVSRIFQRLQVISVLRGTAHAAAGNRRR
RNLRAGAGGRTPAVGHRAAARAGRHRHHHRHRAVPVGPAVADRDRAARDLLPERDPGRRGGAQKALPPRPGGDSGGSRAG
SRKARAPIAFRGDGGRVRFIALVDDRAAQPAAPAGRKGDQLLPEPAEIRCLLR

Sequences:

>Translated_773_residues
MMSAHEVMSAHETERGAMQSKPWWSSAVFYQVYPRSFADSDGDGVGDIDGVTAHLDHLEQLGVDAIWLNPVTVSPMADHG
YDVADPRDIDPLFGGMAAIERLIAAAHRRGIKITMDVVPNHTSSAHPWFQAALAAGPGSDARQRYFFRDGRGADGELPPN
NWTSVFGGSAWTRVLEPDGNPGQWYLHLFDTEQPDLNWEHPDVFDDFEKTLRFWLERGVDGFRIDVAHGMAKPAGLPDSP
DLESKVLHHSDDDPRFNHPSVHDIHRDIRKVVNDYPGAVTVGEVWVTDNARWAEYLRPDELHLGFNFRLTKIDFDAVQIH
DAIQNSLAATALQEATPTWTLSNHDVGREVTRYGGGEVGLRRARAMAMVMLALPGAVFIYNGEELGLPDVELPDEVLQDP
TWERSGHTERGRDKCRVPMPWSGQAPPFGFSSRTDTWLPMPKEWAALTVQKQRDDPDSTLSFFRRALELRRRRVEFDGDG
VELAGGDRRCGDVPASRRAGVRPQQRRAARAAAAGRTGAGERAAAGREAAPGRGGLAGLAARPGRAFRRPLLYMLTHGLL
RVDSDRRRPGGHRGGGPAARSRGGQHRLDRPRLRRRRHRPEVAIGVQQHARRAVSRIFQRLQVISVLRGTAHAAAGNRRR
RNLRAGAGGRTPAVGHRAAARAGRHRHHHRHRAVPVGPAVADRDRAARDLLPERDPGRRGGAQKALPPRPGGDSGGSRAG
SRKARAPIAFRGDGGRVRFIALVDDRAAQPAAPAGRKGDQLLPEPAEIRCLLR
>Mature_773_residues
MMSAHEVMSAHETERGAMQSKPWWSSAVFYQVYPRSFADSDGDGVGDIDGVTAHLDHLEQLGVDAIWLNPVTVSPMADHG
YDVADPRDIDPLFGGMAAIERLIAAAHRRGIKITMDVVPNHTSSAHPWFQAALAAGPGSDARQRYFFRDGRGADGELPPN
NWTSVFGGSAWTRVLEPDGNPGQWYLHLFDTEQPDLNWEHPDVFDDFEKTLRFWLERGVDGFRIDVAHGMAKPAGLPDSP
DLESKVLHHSDDDPRFNHPSVHDIHRDIRKVVNDYPGAVTVGEVWVTDNARWAEYLRPDELHLGFNFRLTKIDFDAVQIH
DAIQNSLAATALQEATPTWTLSNHDVGREVTRYGGGEVGLRRARAMAMVMLALPGAVFIYNGEELGLPDVELPDEVLQDP
TWERSGHTERGRDKCRVPMPWSGQAPPFGFSSRTDTWLPMPKEWAALTVQKQRDDPDSTLSFFRRALELRRRRVEFDGDG
VELAGGDRRCGDVPASRRAGVRPQQRRAARAAAAGRTGAGERAAAGREAAPGRGGLAGLAARPGRAFRRPLLYMLTHGLL
RVDSDRRRPGGHRGGGPAARSRGGQHRLDRPRLRRRRHRPEVAIGVQQHARRAVSRIFQRLQVISVLRGTAHAAAGNRRR
RNLRAGAGGRTPAVGHRAAARAGRHRHHHRHRAVPVGPAVADRDRAARDLLPERDPGRRGGAQKALPPRPGGDSGGSRAG
SRKARAPIAFRGDGGRVRFIALVDDRAAQPAAPAGRKGDQLLPEPAEIRCLLR

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI187423904, Length=466, Percent_Identity=31.3304721030043, Blast_Score=231, Evalue=2e-60,
Organism=Escherichia coli, GI1790687, Length=489, Percent_Identity=35.9918200408998, Blast_Score=262, Evalue=5e-71,
Organism=Escherichia coli, GI1786604, Length=461, Percent_Identity=25.3796095444685, Blast_Score=88, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI32565753, Length=392, Percent_Identity=25.5102040816327, Blast_Score=119, Evalue=9e-27,
Organism=Caenorhabditis elegans, GI25147709, Length=489, Percent_Identity=25.1533742331288, Blast_Score=99, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6322245, Length=496, Percent_Identity=33.0645161290323, Blast_Score=269, Evalue=1e-72,
Organism=Saccharomyces cerevisiae, GI6319776, Length=553, Percent_Identity=32.1880650994575, Blast_Score=263, Evalue=8e-71,
Organism=Saccharomyces cerevisiae, GI6321731, Length=553, Percent_Identity=32.0072332730561, Blast_Score=262, Evalue=2e-70,
Organism=Saccharomyces cerevisiae, GI6321726, Length=518, Percent_Identity=34.1698841698842, Blast_Score=260, Evalue=5e-70,
Organism=Saccharomyces cerevisiae, GI6324416, Length=512, Percent_Identity=33.59375, Blast_Score=247, Evalue=5e-66,
Organism=Saccharomyces cerevisiae, GI6322241, Length=512, Percent_Identity=33.59375, Blast_Score=247, Evalue=6e-66,
Organism=Saccharomyces cerevisiae, GI6322021, Length=512, Percent_Identity=33.59375, Blast_Score=247, Evalue=6e-66,
Organism=Drosophila melanogaster, GI24583747, Length=476, Percent_Identity=35.7142857142857, Blast_Score=265, Evalue=7e-71,
Organism=Drosophila melanogaster, GI24583749, Length=476, Percent_Identity=35.7142857142857, Blast_Score=265, Evalue=7e-71,
Organism=Drosophila melanogaster, GI221330053, Length=486, Percent_Identity=33.5390946502058, Blast_Score=262, Evalue=9e-70,
Organism=Drosophila melanogaster, GI24586597, Length=487, Percent_Identity=35.1129363449692, Blast_Score=261, Evalue=2e-69,
Organism=Drosophila melanogaster, GI24586599, Length=491, Percent_Identity=34.2158859470468, Blast_Score=261, Evalue=2e-69,
Organism=Drosophila melanogaster, GI24586591, Length=480, Percent_Identity=35.625, Blast_Score=259, Evalue=5e-69,
Organism=Drosophila melanogaster, GI24586589, Length=479, Percent_Identity=36.9519832985386, Blast_Score=259, Evalue=6e-69,
Organism=Drosophila melanogaster, GI24583745, Length=588, Percent_Identity=30.952380952381, Blast_Score=252, Evalue=6e-67,
Organism=Drosophila melanogaster, GI24586593, Length=485, Percent_Identity=34.2268041237113, Blast_Score=249, Evalue=4e-66,
Organism=Drosophila melanogaster, GI24586587, Length=481, Percent_Identity=32.6403326403326, Blast_Score=248, Evalue=1e-65,
Organism=Drosophila melanogaster, GI45549022, Length=490, Percent_Identity=33.0612244897959, Blast_Score=241, Evalue=2e-63,
Organism=Drosophila melanogaster, GI281360393, Length=432, Percent_Identity=31.4814814814815, Blast_Score=176, Evalue=7e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR006589
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =3.2.1.10 [H]

Molecular weight: Translated: 85172; Mature: 85172

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSAHEVMSAHETERGAMQSKPWWSSAVFYQVYPRSFADSDGDGVGDIDGVTAHLDHLEQ
CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHCCCCCCCCCCCCHHHHHHHHHHH
LGVDAIWLNPVTVSPMADHGYDVADPRDIDPLFGGMAAIERLIAAAHRRGIKITMDVVPN
CCCCEEEECCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
HTSSAHPWFQAALAAGPGSDARQRYFFRDGRGADGELPPNNWTSVFGGSAWTRVLEPDGN
CCCCCCHHHHHHHHCCCCCHHHHHHHEECCCCCCCCCCCCCCCHHCCCCCEEEEECCCCC
PGQWYLHLFDTEQPDLNWEHPDVFDDFEKTLRFWLERGVDGFRIDVAHGMAKPAGLPDSP
CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCCCCCCC
DLESKVLHHSDDDPRFNHPSVHDIHRDIRKVVNDYPGAVTVGEVWVTDNARWAEYLRPDE
CHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHCCCCC
LHLGFNFRLTKIDFDAVQIHDAIQNSLAATALQEATPTWTLSNHDVGREVTRYGGGEVGL
EEECEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHCCCCHHHH
RRARAMAMVMLALPGAVFIYNGEELGLPDVELPDEVLQDPTWERSGHTERGRDKCRVPMP
HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
WSGQAPPFGFSSRTDTWLPMPKEWAALTVQKQRDDPDSTLSFFRRALELRRRRVEFDGDG
CCCCCCCCCCCCCCCCCCCCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
VELAGGDRRCGDVPASRRAGVRPQQRRAARAAAAGRTGAGERAAAGREAAPGRGGLAGLA
EEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCC
ARPGRAFRRPLLYMLTHGLLRVDSDRRRPGGHRGGGPAARSRGGQHRLDRPRLRRRRHRP
CCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHCCC
EVAIGVQQHARRAVSRIFQRLQVISVLRGTAHAAAGNRRRRNLRAGAGGRTPAVGHRAAA
CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHH
RAGRHRHHHRHRAVPVGPAVADRDRAARDLLPERDPGRRGGAQKALPPRPGGDSGGSRAG
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SRKARAPIAFRGDGGRVRFIALVDDRAAQPAAPAGRKGDQLLPEPAEIRCLLR
CCCCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCEEECC
>Mature Secondary Structure
MMSAHEVMSAHETERGAMQSKPWWSSAVFYQVYPRSFADSDGDGVGDIDGVTAHLDHLEQ
CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHCCCCCCCCCCCCHHHHHHHHHHH
LGVDAIWLNPVTVSPMADHGYDVADPRDIDPLFGGMAAIERLIAAAHRRGIKITMDVVPN
CCCCEEEECCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
HTSSAHPWFQAALAAGPGSDARQRYFFRDGRGADGELPPNNWTSVFGGSAWTRVLEPDGN
CCCCCCHHHHHHHHCCCCCHHHHHHHEECCCCCCCCCCCCCCCHHCCCCCEEEEECCCCC
PGQWYLHLFDTEQPDLNWEHPDVFDDFEKTLRFWLERGVDGFRIDVAHGMAKPAGLPDSP
CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCCCCCCC
DLESKVLHHSDDDPRFNHPSVHDIHRDIRKVVNDYPGAVTVGEVWVTDNARWAEYLRPDE
CHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHCCCCC
LHLGFNFRLTKIDFDAVQIHDAIQNSLAATALQEATPTWTLSNHDVGREVTRYGGGEVGL
EEECEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHCCCCHHHH
RRARAMAMVMLALPGAVFIYNGEELGLPDVELPDEVLQDPTWERSGHTERGRDKCRVPMP
HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
WSGQAPPFGFSSRTDTWLPMPKEWAALTVQKQRDDPDSTLSFFRRALELRRRRVEFDGDG
CCCCCCCCCCCCCCCCCCCCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
VELAGGDRRCGDVPASRRAGVRPQQRRAARAAAAGRTGAGERAAAGREAAPGRGGLAGLA
EEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCC
ARPGRAFRRPLLYMLTHGLLRVDSDRRRPGGHRGGGPAARSRGGQHRLDRPRLRRRRHRP
CCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHCCC
EVAIGVQQHARRAVSRIFQRLQVISVLRGTAHAAAGNRRRRNLRAGAGGRTPAVGHRAAA
CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHH
RAGRHRHHHRHRAVPVGPAVADRDRAARDLLPERDPGRRGGAQKALPPRPGGDSGGSRAG
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SRKARAPIAFRGDGGRVRFIALVDDRAAQPAAPAGRKGDQLLPEPAEIRCLLR
CCCCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1761534 [H]