| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is malL [H]
Identifier: 41408390
GI number: 41408390
Start: 2561279
End: 2563600
Strand: Direct
Name: malL [H]
Synonym: MAP2292
Alternate gene names: 41408390
Gene position: 2561279-2563600 (Clockwise)
Preceding gene: 41408389
Following gene: 41408400
Centisome position: 53.03
GC content: 68.82
Gene sequence:
>2322_bases GTGATGTCAGCCCACGAAGTGATGTCAGCCCACGAAACCGAGCGGGGTGCAATGCAATCCAAGCCGTGGTGGTCGAGCGC GGTGTTCTATCAGGTGTATCCGAGGTCGTTCGCCGACAGCGACGGCGACGGCGTGGGCGACATCGACGGGGTGACGGCGC ATCTGGACCACCTCGAGCAACTGGGGGTCGACGCGATCTGGCTCAATCCGGTCACCGTCTCCCCGATGGCCGACCACGGC TACGACGTCGCCGACCCGCGCGACATCGACCCGCTGTTCGGCGGGATGGCCGCGATCGAACGGCTGATCGCCGCGGCGCA CCGGCGGGGCATCAAGATCACCATGGACGTGGTGCCCAACCACACCAGCTCGGCGCATCCGTGGTTCCAGGCGGCGCTGG CCGCCGGACCGGGTTCCGACGCCCGGCAGCGCTACTTCTTCCGGGACGGCCGCGGCGCGGACGGCGAGCTGCCGCCGAAC AACTGGACCTCGGTGTTCGGCGGGTCGGCCTGGACCCGGGTGCTCGAACCCGACGGCAATCCCGGCCAGTGGTATCTGCA CCTGTTCGACACCGAGCAGCCCGACCTGAACTGGGAGCACCCGGACGTCTTCGACGACTTCGAGAAGACGCTGCGGTTCT GGCTGGAGCGCGGCGTGGACGGCTTCCGCATCGACGTGGCGCACGGCATGGCCAAACCGGCCGGCCTGCCGGATTCGCCG GACCTCGAGTCCAAGGTGTTGCACCACAGCGACGACGACCCGCGCTTCAACCACCCGAGCGTGCACGACATCCACCGCGA CATCCGCAAGGTGGTCAACGACTACCCCGGCGCGGTGACCGTCGGCGAGGTGTGGGTCACCGACAACGCCCGCTGGGCGG AGTACCTGCGGCCCGACGAACTGCATCTGGGGTTCAACTTCCGGCTGACCAAGATCGACTTCGACGCCGTCCAGATCCAC GACGCGATCCAGAACTCGCTGGCCGCCACCGCCCTGCAGGAGGCCACCCCGACCTGGACGCTGTCCAACCACGACGTCGG CCGGGAGGTCACCCGCTACGGCGGCGGCGAGGTCGGGCTGCGCCGGGCCCGTGCGATGGCGATGGTGATGCTCGCCCTGC CCGGCGCGGTGTTCATCTACAACGGCGAGGAGCTGGGCCTGCCCGACGTCGAGTTGCCCGACGAGGTGTTGCAGGACCCC ACCTGGGAGCGCTCGGGACACACCGAGCGGGGCCGGGACAAATGCCGGGTGCCGATGCCCTGGTCGGGCCAGGCTCCCCC GTTCGGGTTCTCCTCGCGCACCGACACCTGGCTGCCGATGCCGAAGGAGTGGGCGGCGCTGACCGTGCAAAAGCAGCGCG ACGACCCCGACTCGACGTTGTCGTTCTTCCGGCGGGCCCTCGAATTGCGAAGGCGCCGTGTGGAATTCGACGGCGACGGC GTCGAATTGGCTGGAGGCGACCGCCGATGCGGTGACGTTCCGGCGTCCCGGCGGGCTGGTGTGCGCCCTCAACAGCGGCG AGCAGCCCGTGCCGCTGCCGCCGGGCGAACTGGTGCTGGCGAGCGCGCCGCTGCTGGACGGGAAGCTGCCCCCGGACGCG GCGGCCTGGCTGGCCTAGCGGCGCGACCGGGGCGAGCGTTTCGCCGCCCGCTGCTCTATATGTTGACCCATGGCTTGCTA CGAGTGGACAGTGATCGGCGCCGGCCCGGCGGGCATCGCGGCGGTGGGCCGGCTGCTCGATCACGGGGCGGACAGCATCG CCTGGATCGACCCCGCCTTCGCCGCCGGAGACATCGGCCAGAAGTGGCGATCGGTGTCCAGCAACACGCACGCCGGGCTG TTTCTCGAATATTTCAACGGCTGCAAGTCATTTCGGTTCTCCGAGGCACCGCCCATGCCGCTGCGGGAAATCGACGCCGG CGAAACCTGCGCGCTGGCGCTGGTGGCCGAACCCCTGCTGTGGGTCACCGGGCAGCTGCGCGAGCGGGTCGACACCGTCA CCACCACCGCCACCGCGCTGTACCTGTCGGACCGGCGGTGGCGGATCGAGACCGAGCAGCGCGAGATCTTCTCCCGGAAC GTGATCCTGGCCGTCGGGGCGGTGCCCAAAAAGCTTTGCCACCCCGGCCTGGAGGAGATTCCGGTGGAAGTCGCGCTGGA TCCCGAAAAGCTCGCGCGCCAATCGCTTTCCGGGGCGACGGTGGGCGTGTTCGGTTCATCGCACTCGTCGATGATCGTGC TGCCCAACCTGCTGCGCCAGCCGGTCGAAAAGGTGATCAACTTCTACCGGAGCCCGCTGAAATACGCTGTCTACTTCGAT GA
Upstream 100 bases:
>100_bases CGGTGGCGTCGATCGACTCGAAGACTCTGGACGACGAGCACCGTCGCGAGCTGCTCGACTATCTGGAGATGGCCGCGCAC TCGCTGGTGAATTCTCCGTT
Downstream 100 bases:
>100_bases TTGGATTCTCTTCGACGACACCGGCCTGAAGGGCCAGGCCGCGGTGTGGGCGCGGGAGAACATCGACGGGGTGCTGCCGG AACGGCTGCACCGGTGTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Dextrin 6-alpha-D-glucanohydrolase; Oligosaccharide alpha-1,6-glucosidase; Sucrase-isomaltase; Isomaltase [H]
Number of amino acids: Translated: 773; Mature: 773
Protein sequence:
>773_residues MMSAHEVMSAHETERGAMQSKPWWSSAVFYQVYPRSFADSDGDGVGDIDGVTAHLDHLEQLGVDAIWLNPVTVSPMADHG YDVADPRDIDPLFGGMAAIERLIAAAHRRGIKITMDVVPNHTSSAHPWFQAALAAGPGSDARQRYFFRDGRGADGELPPN NWTSVFGGSAWTRVLEPDGNPGQWYLHLFDTEQPDLNWEHPDVFDDFEKTLRFWLERGVDGFRIDVAHGMAKPAGLPDSP DLESKVLHHSDDDPRFNHPSVHDIHRDIRKVVNDYPGAVTVGEVWVTDNARWAEYLRPDELHLGFNFRLTKIDFDAVQIH DAIQNSLAATALQEATPTWTLSNHDVGREVTRYGGGEVGLRRARAMAMVMLALPGAVFIYNGEELGLPDVELPDEVLQDP TWERSGHTERGRDKCRVPMPWSGQAPPFGFSSRTDTWLPMPKEWAALTVQKQRDDPDSTLSFFRRALELRRRRVEFDGDG VELAGGDRRCGDVPASRRAGVRPQQRRAARAAAAGRTGAGERAAAGREAAPGRGGLAGLAARPGRAFRRPLLYMLTHGLL RVDSDRRRPGGHRGGGPAARSRGGQHRLDRPRLRRRRHRPEVAIGVQQHARRAVSRIFQRLQVISVLRGTAHAAAGNRRR RNLRAGAGGRTPAVGHRAAARAGRHRHHHRHRAVPVGPAVADRDRAARDLLPERDPGRRGGAQKALPPRPGGDSGGSRAG SRKARAPIAFRGDGGRVRFIALVDDRAAQPAAPAGRKGDQLLPEPAEIRCLLR
Sequences:
>Translated_773_residues MMSAHEVMSAHETERGAMQSKPWWSSAVFYQVYPRSFADSDGDGVGDIDGVTAHLDHLEQLGVDAIWLNPVTVSPMADHG YDVADPRDIDPLFGGMAAIERLIAAAHRRGIKITMDVVPNHTSSAHPWFQAALAAGPGSDARQRYFFRDGRGADGELPPN NWTSVFGGSAWTRVLEPDGNPGQWYLHLFDTEQPDLNWEHPDVFDDFEKTLRFWLERGVDGFRIDVAHGMAKPAGLPDSP DLESKVLHHSDDDPRFNHPSVHDIHRDIRKVVNDYPGAVTVGEVWVTDNARWAEYLRPDELHLGFNFRLTKIDFDAVQIH DAIQNSLAATALQEATPTWTLSNHDVGREVTRYGGGEVGLRRARAMAMVMLALPGAVFIYNGEELGLPDVELPDEVLQDP TWERSGHTERGRDKCRVPMPWSGQAPPFGFSSRTDTWLPMPKEWAALTVQKQRDDPDSTLSFFRRALELRRRRVEFDGDG VELAGGDRRCGDVPASRRAGVRPQQRRAARAAAAGRTGAGERAAAGREAAPGRGGLAGLAARPGRAFRRPLLYMLTHGLL RVDSDRRRPGGHRGGGPAARSRGGQHRLDRPRLRRRRHRPEVAIGVQQHARRAVSRIFQRLQVISVLRGTAHAAAGNRRR RNLRAGAGGRTPAVGHRAAARAGRHRHHHRHRAVPVGPAVADRDRAARDLLPERDPGRRGGAQKALPPRPGGDSGGSRAG SRKARAPIAFRGDGGRVRFIALVDDRAAQPAAPAGRKGDQLLPEPAEIRCLLR >Mature_773_residues MMSAHEVMSAHETERGAMQSKPWWSSAVFYQVYPRSFADSDGDGVGDIDGVTAHLDHLEQLGVDAIWLNPVTVSPMADHG YDVADPRDIDPLFGGMAAIERLIAAAHRRGIKITMDVVPNHTSSAHPWFQAALAAGPGSDARQRYFFRDGRGADGELPPN NWTSVFGGSAWTRVLEPDGNPGQWYLHLFDTEQPDLNWEHPDVFDDFEKTLRFWLERGVDGFRIDVAHGMAKPAGLPDSP DLESKVLHHSDDDPRFNHPSVHDIHRDIRKVVNDYPGAVTVGEVWVTDNARWAEYLRPDELHLGFNFRLTKIDFDAVQIH DAIQNSLAATALQEATPTWTLSNHDVGREVTRYGGGEVGLRRARAMAMVMLALPGAVFIYNGEELGLPDVELPDEVLQDP TWERSGHTERGRDKCRVPMPWSGQAPPFGFSSRTDTWLPMPKEWAALTVQKQRDDPDSTLSFFRRALELRRRRVEFDGDG VELAGGDRRCGDVPASRRAGVRPQQRRAARAAAAGRTGAGERAAAGREAAPGRGGLAGLAARPGRAFRRPLLYMLTHGLL RVDSDRRRPGGHRGGGPAARSRGGQHRLDRPRLRRRRHRPEVAIGVQQHARRAVSRIFQRLQVISVLRGTAHAAAGNRRR RNLRAGAGGRTPAVGHRAAARAGRHRHHHRHRAVPVGPAVADRDRAARDLLPERDPGRRGGAQKALPPRPGGDSGGSRAG SRKARAPIAFRGDGGRVRFIALVDDRAAQPAAPAGRKGDQLLPEPAEIRCLLR
Specific function: Unknown
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Homo sapiens, GI187423904, Length=466, Percent_Identity=31.3304721030043, Blast_Score=231, Evalue=2e-60, Organism=Escherichia coli, GI1790687, Length=489, Percent_Identity=35.9918200408998, Blast_Score=262, Evalue=5e-71, Organism=Escherichia coli, GI1786604, Length=461, Percent_Identity=25.3796095444685, Blast_Score=88, Evalue=2e-18, Organism=Caenorhabditis elegans, GI32565753, Length=392, Percent_Identity=25.5102040816327, Blast_Score=119, Evalue=9e-27, Organism=Caenorhabditis elegans, GI25147709, Length=489, Percent_Identity=25.1533742331288, Blast_Score=99, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6322245, Length=496, Percent_Identity=33.0645161290323, Blast_Score=269, Evalue=1e-72, Organism=Saccharomyces cerevisiae, GI6319776, Length=553, Percent_Identity=32.1880650994575, Blast_Score=263, Evalue=8e-71, Organism=Saccharomyces cerevisiae, GI6321731, Length=553, Percent_Identity=32.0072332730561, Blast_Score=262, Evalue=2e-70, Organism=Saccharomyces cerevisiae, GI6321726, Length=518, Percent_Identity=34.1698841698842, Blast_Score=260, Evalue=5e-70, Organism=Saccharomyces cerevisiae, GI6324416, Length=512, Percent_Identity=33.59375, Blast_Score=247, Evalue=5e-66, Organism=Saccharomyces cerevisiae, GI6322241, Length=512, Percent_Identity=33.59375, Blast_Score=247, Evalue=6e-66, Organism=Saccharomyces cerevisiae, GI6322021, Length=512, Percent_Identity=33.59375, Blast_Score=247, Evalue=6e-66, Organism=Drosophila melanogaster, GI24583747, Length=476, Percent_Identity=35.7142857142857, Blast_Score=265, Evalue=7e-71, Organism=Drosophila melanogaster, GI24583749, Length=476, Percent_Identity=35.7142857142857, Blast_Score=265, Evalue=7e-71, Organism=Drosophila melanogaster, GI221330053, Length=486, Percent_Identity=33.5390946502058, Blast_Score=262, Evalue=9e-70, Organism=Drosophila melanogaster, GI24586597, Length=487, Percent_Identity=35.1129363449692, Blast_Score=261, Evalue=2e-69, Organism=Drosophila melanogaster, GI24586599, Length=491, Percent_Identity=34.2158859470468, Blast_Score=261, Evalue=2e-69, Organism=Drosophila melanogaster, GI24586591, Length=480, Percent_Identity=35.625, Blast_Score=259, Evalue=5e-69, Organism=Drosophila melanogaster, GI24586589, Length=479, Percent_Identity=36.9519832985386, Blast_Score=259, Evalue=6e-69, Organism=Drosophila melanogaster, GI24583745, Length=588, Percent_Identity=30.952380952381, Blast_Score=252, Evalue=6e-67, Organism=Drosophila melanogaster, GI24586593, Length=485, Percent_Identity=34.2268041237113, Blast_Score=249, Evalue=4e-66, Organism=Drosophila melanogaster, GI24586587, Length=481, Percent_Identity=32.6403326403326, Blast_Score=248, Evalue=1e-65, Organism=Drosophila melanogaster, GI45549022, Length=490, Percent_Identity=33.0612244897959, Blast_Score=241, Evalue=2e-63, Organism=Drosophila melanogaster, GI281360393, Length=432, Percent_Identity=31.4814814814815, Blast_Score=176, Evalue=7e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013780 - InterPro: IPR006047 - InterPro: IPR006589 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00128 Alpha-amylase [H]
EC number: =3.2.1.10 [H]
Molecular weight: Translated: 85172; Mature: 85172
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSAHEVMSAHETERGAMQSKPWWSSAVFYQVYPRSFADSDGDGVGDIDGVTAHLDHLEQ CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHCCCCCCCCCCCCHHHHHHHHHHH LGVDAIWLNPVTVSPMADHGYDVADPRDIDPLFGGMAAIERLIAAAHRRGIKITMDVVPN CCCCEEEECCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCC HTSSAHPWFQAALAAGPGSDARQRYFFRDGRGADGELPPNNWTSVFGGSAWTRVLEPDGN CCCCCCHHHHHHHHCCCCCHHHHHHHEECCCCCCCCCCCCCCCHHCCCCCEEEEECCCCC PGQWYLHLFDTEQPDLNWEHPDVFDDFEKTLRFWLERGVDGFRIDVAHGMAKPAGLPDSP CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCCCCCCC DLESKVLHHSDDDPRFNHPSVHDIHRDIRKVVNDYPGAVTVGEVWVTDNARWAEYLRPDE CHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHCCCCC LHLGFNFRLTKIDFDAVQIHDAIQNSLAATALQEATPTWTLSNHDVGREVTRYGGGEVGL EEECEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHCCCCHHHH RRARAMAMVMLALPGAVFIYNGEELGLPDVELPDEVLQDPTWERSGHTERGRDKCRVPMP HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC WSGQAPPFGFSSRTDTWLPMPKEWAALTVQKQRDDPDSTLSFFRRALELRRRRVEFDGDG CCCCCCCCCCCCCCCCCCCCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCC VELAGGDRRCGDVPASRRAGVRPQQRRAARAAAAGRTGAGERAAAGREAAPGRGGLAGLA EEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCC ARPGRAFRRPLLYMLTHGLLRVDSDRRRPGGHRGGGPAARSRGGQHRLDRPRLRRRRHRP CCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHCCC EVAIGVQQHARRAVSRIFQRLQVISVLRGTAHAAAGNRRRRNLRAGAGGRTPAVGHRAAA CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHH RAGRHRHHHRHRAVPVGPAVADRDRAARDLLPERDPGRRGGAQKALPPRPGGDSGGSRAG HHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SRKARAPIAFRGDGGRVRFIALVDDRAAQPAAPAGRKGDQLLPEPAEIRCLLR CCCCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCEEECC >Mature Secondary Structure MMSAHEVMSAHETERGAMQSKPWWSSAVFYQVYPRSFADSDGDGVGDIDGVTAHLDHLEQ CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHCCCCCCCCCCCCHHHHHHHHHHH LGVDAIWLNPVTVSPMADHGYDVADPRDIDPLFGGMAAIERLIAAAHRRGIKITMDVVPN CCCCEEEECCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCC HTSSAHPWFQAALAAGPGSDARQRYFFRDGRGADGELPPNNWTSVFGGSAWTRVLEPDGN CCCCCCHHHHHHHHCCCCCHHHHHHHEECCCCCCCCCCCCCCCHHCCCCCEEEEECCCCC PGQWYLHLFDTEQPDLNWEHPDVFDDFEKTLRFWLERGVDGFRIDVAHGMAKPAGLPDSP CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCCCCCCC DLESKVLHHSDDDPRFNHPSVHDIHRDIRKVVNDYPGAVTVGEVWVTDNARWAEYLRPDE CHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHCCCCC LHLGFNFRLTKIDFDAVQIHDAIQNSLAATALQEATPTWTLSNHDVGREVTRYGGGEVGL EEECEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHCCCCHHHH RRARAMAMVMLALPGAVFIYNGEELGLPDVELPDEVLQDPTWERSGHTERGRDKCRVPMP HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC WSGQAPPFGFSSRTDTWLPMPKEWAALTVQKQRDDPDSTLSFFRRALELRRRRVEFDGDG CCCCCCCCCCCCCCCCCCCCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCC VELAGGDRRCGDVPASRRAGVRPQQRRAARAAAAGRTGAGERAAAGREAAPGRGGLAGLA EEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCC ARPGRAFRRPLLYMLTHGLLRVDSDRRRPGGHRGGGPAARSRGGQHRLDRPRLRRRRHRP CCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHCCC EVAIGVQQHARRAVSRIFQRLQVISVLRGTAHAAAGNRRRRNLRAGAGGRTPAVGHRAAA CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHH RAGRHRHHHRHRAVPVGPAVADRDRAARDLLPERDPGRRGGAQKALPPRPGGDSGGSRAG HHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SRKARAPIAFRGDGGRVRFIALVDDRAAQPAAPAGRKGDQLLPEPAEIRCLLR CCCCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1761534 [H]