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The map label for this gene is 41407628

Identifier: 41407628

GI number: 41407628

Start: 1679436

End: 1680929

Strand: Direct

Name: 41407628

Synonym: MAP1530

Alternate gene names: NA

Gene position: 1679436-1680929 (Clockwise)

Preceding gene: 41407627

Following gene: 41407630

Centisome position: 34.77

GC content: 68.67

Gene sequence:

>1494_bases
ATGAGCACCGAGATACCGGCAACTGTCAGTGCCCATGACGTGACGTCGTGGTCCGACGACGTCGACGTGGTGGTGATCGG
CTTCGGCATTGCCGGCGGCTGCGCCGCGGTCAGCGCGGCGGCCGATGGCGCGCGGGTGTTGGTGCTGGAACGCGCGGCCG
CGGCCGGCGGCACCACTTCGCTTGCCGGGGGCCACTTTTACCTCGGCGGTGGCACCGCGGTGCAGCAGGCGACCGGTCAC
GACGACTCCGCCGAGGAGATGTACAAGTACCTGGTGGCGGTGTCGCGGGAGCCCGAGCTGGACAAGATCCGCGCCTACTG
CGAGGGCAGCGTCGAGCACTTCAACTGGTTGGAAGACTTGGGTTTTCAGTTCGAACGCAGCTACTACCCGGGCAAGGTGG
TCGTCCCGCCGGGCACCGAGGGCCTGAGCTACACCGGCAACGAGAAGGTGTGGCCGTTCTGCGAGCAGGCCAAGCCGGCG
CCGCGCGGGCATTCCGTGCCGGTGCCCGGGGAGCTGGGCGGGGCCGCGATGGTCATCGACCTGCTGGTGAAACGCGCCGA
GGCGCTGGGCGTGCAGATCCGTTACGAGACCGGGGCGACCAACCTGATCGTGGACGACGACGGCGCCGTGGTCGGTGTGG
CCTGGAAGCATTTCACCGAGACCGGCGCGGTCAAGGCCGACGCGGTGATCCTCGCGGCCGGCGGCTTCGCGATGAATCCG
CAGATGGTGGCCGAGCACACGCCGGCGTTGGGCCAGCCGCGGCGCACCAAGCACCACGGCCTGGTGGCGCCGTACATTCT
GGGCAATCCGCACGACGACGGGCTTGCCATCCGGATGGGGGTGTCGGCGGGCGGGGCGACCAAGCACATGGACGAGCTGT
TCATCACCGCGGCCGCCTACCCGCCGGAGGTGCTGCTGACCGGGATCATCGTCAACAAGGAGGGTAAGCGCTTCGTCGCC
GAGGACTCCTATCATTCGCGCACTTCGGCTTTCGTGTTGGAGCAGCCGGAGCAAACCGCATACCTGATCGTGGACGAGGC
GCACACCGAGATGCCGGAGATGCCGCTGATCCGGTTCCTCGACGGCTACGAGACGATCGCGGAAATGGAAGCCGCGCTGG
GCATTCCGGCCGGCAACCTGGCCGCGACGCTGGAGCGCTACAACAAGTTCGCCACCGCCGGCGAAGACCCGGATTTCCAC
AAGCAGCCGGAATACCTTGCCGCACAAGACAATGGACCGTGGGCGGTGTTCGACCTGTCGCTCGGGCGGGCGATGTACTC
GGGGTTCACCATCGGCGGCCTGGCGGTGAGCGTCGACGGCGAGGTGCAACGGGCCGACGGCTCGGTGGTGCCCGGGTTGT
ATGCCGCCGGCGCGTGCGCGTCGAACCTGGCTCAGGACGGCAAGGGGTACGCCAGCGGGACGCAGCTGGGTGAGGGTTCG
TTCTTCGGGCGCCGCGCCGGAGCGCACGCGGCGCGGCGCGCCGCGAAAGCGTAG

Upstream 100 bases:

>100_bases
GCGCCCGAGATGCGGGCGTTCTACGACTACATCAAACAGCAGCAGCGGTGAGCCGCGCCCGCGCGGACGCGCGGCACGGC
GATGAGGAGGAATGGCGCCA

Downstream 100 bases:

>100_bases
GCGCGCATCAAACCCGCGCGGGCTCCTTTTCCACCGGGCTCAGCTGCCACGGGCCGCCGCCGAGCAGGTGCAGCTGCTGG
TCGTGGTGCTGCTCGACGGT

Product: hypothetical protein

Products: NA

Alternate protein names: Flavocytochrome c; FL cyt [H]

Number of amino acids: Translated: 497; Mature: 496

Protein sequence:

>497_residues
MSTEIPATVSAHDVTSWSDDVDVVVIGFGIAGGCAAVSAAADGARVLVLERAAAAGGTTSLAGGHFYLGGGTAVQQATGH
DDSAEEMYKYLVAVSREPELDKIRAYCEGSVEHFNWLEDLGFQFERSYYPGKVVVPPGTEGLSYTGNEKVWPFCEQAKPA
PRGHSVPVPGELGGAAMVIDLLVKRAEALGVQIRYETGATNLIVDDDGAVVGVAWKHFTETGAVKADAVILAAGGFAMNP
QMVAEHTPALGQPRRTKHHGLVAPYILGNPHDDGLAIRMGVSAGGATKHMDELFITAAAYPPEVLLTGIIVNKEGKRFVA
EDSYHSRTSAFVLEQPEQTAYLIVDEAHTEMPEMPLIRFLDGYETIAEMEAALGIPAGNLAATLERYNKFATAGEDPDFH
KQPEYLAAQDNGPWAVFDLSLGRAMYSGFTIGGLAVSVDGEVQRADGSVVPGLYAAGACASNLAQDGKGYASGTQLGEGS
FFGRRAGAHAARRAAKA

Sequences:

>Translated_497_residues
MSTEIPATVSAHDVTSWSDDVDVVVIGFGIAGGCAAVSAAADGARVLVLERAAAAGGTTSLAGGHFYLGGGTAVQQATGH
DDSAEEMYKYLVAVSREPELDKIRAYCEGSVEHFNWLEDLGFQFERSYYPGKVVVPPGTEGLSYTGNEKVWPFCEQAKPA
PRGHSVPVPGELGGAAMVIDLLVKRAEALGVQIRYETGATNLIVDDDGAVVGVAWKHFTETGAVKADAVILAAGGFAMNP
QMVAEHTPALGQPRRTKHHGLVAPYILGNPHDDGLAIRMGVSAGGATKHMDELFITAAAYPPEVLLTGIIVNKEGKRFVA
EDSYHSRTSAFVLEQPEQTAYLIVDEAHTEMPEMPLIRFLDGYETIAEMEAALGIPAGNLAATLERYNKFATAGEDPDFH
KQPEYLAAQDNGPWAVFDLSLGRAMYSGFTIGGLAVSVDGEVQRADGSVVPGLYAAGACASNLAQDGKGYASGTQLGEGS
FFGRRAGAHAARRAAKA
>Mature_496_residues
STEIPATVSAHDVTSWSDDVDVVVIGFGIAGGCAAVSAAADGARVLVLERAAAAGGTTSLAGGHFYLGGGTAVQQATGHD
DSAEEMYKYLVAVSREPELDKIRAYCEGSVEHFNWLEDLGFQFERSYYPGKVVVPPGTEGLSYTGNEKVWPFCEQAKPAP
RGHSVPVPGELGGAAMVIDLLVKRAEALGVQIRYETGATNLIVDDDGAVVGVAWKHFTETGAVKADAVILAAGGFAMNPQ
MVAEHTPALGQPRRTKHHGLVAPYILGNPHDDGLAIRMGVSAGGATKHMDELFITAAAYPPEVLLTGIIVNKEGKRFVAE
DSYHSRTSAFVLEQPEQTAYLIVDEAHTEMPEMPLIRFLDGYETIAEMEAALGIPAGNLAATLERYNKFATAGEDPDFHK
QPEYLAAQDNGPWAVFDLSLGRAMYSGFTIGGLAVSVDGEVQRADGSVVPGLYAAGACASNLAQDGKGYASGTQLGEGSF
FGRRAGAHAARRAAKA

Specific function: Catalyzes fumarate reduction using artificial electron donors such as methyl viologen. The physiological reductant is unknown, but evidence indicates that flavocytochrome c participates in electron transfer from formate to fumarate and possibly also to tr

COG id: COG1053

COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003953
- InterPro:   IPR013027
- InterPro:   IPR010960
- InterPro:   IPR011031
- InterPro:   IPR012286 [H]

Pfam domain/function: PF00890 FAD_binding_2 [H]

EC number: =1.3.99.1 [H]

Molecular weight: Translated: 52300; Mature: 52169

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTEIPATVSAHDVTSWSDDVDVVVIGFGIAGGCAAVSAAADGARVLVLERAAAAGGTTS
CCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCC
LAGGHFYLGGGTAVQQATGHDDSAEEMYKYLVAVSREPELDKIRAYCEGSVEHFNWLEDL
CCCCEEEECCCCEEHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHH
GFQFERSYYPGKVVVPPGTEGLSYTGNEKVWPFCEQAKPAPRGHSVPVPGELGGAAMVID
CCCEECCCCCCEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHH
LLVKRAEALGVQIRYETGATNLIVDDDGAVVGVAWKHFTETGAVKADAVILAAGGFAMNP
HHHHHHHHCEEEEEEECCCCEEEECCCCCEEEEEEHHHHHCCCEEECEEEEEECCCCCCC
QMVAEHTPALGQPRRTKHHGLVAPYILGNPHDDGLAIRMGVSAGGATKHMDELFITAAAY
HHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCHHHHHHEEEEECCC
PPEVLLTGIIVNKEGKRFVAEDSYHSRTSAFVLEQPEQTAYLIVDEAHTEMPEMPLIRFL
CCHHEEEEEEECCCCCEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCHHHHH
DGYETIAEMEAALGIPAGNLAATLERYNKFATAGEDPDFHKQPEYLAAQDNGPWAVFDLS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEEEC
LGRAMYSGFTIGGLAVSVDGEVQRADGSVVPGLYAAGACASNLAQDGKGYASGTQLGEGS
HHHHHHCCEEECCEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
FFGRRAGAHAARRAAKA
CCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
STEIPATVSAHDVTSWSDDVDVVVIGFGIAGGCAAVSAAADGARVLVLERAAAAGGTTS
CCCCCCEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCC
LAGGHFYLGGGTAVQQATGHDDSAEEMYKYLVAVSREPELDKIRAYCEGSVEHFNWLEDL
CCCCEEEECCCCEEHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHH
GFQFERSYYPGKVVVPPGTEGLSYTGNEKVWPFCEQAKPAPRGHSVPVPGELGGAAMVID
CCCEECCCCCCEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHH
LLVKRAEALGVQIRYETGATNLIVDDDGAVVGVAWKHFTETGAVKADAVILAAGGFAMNP
HHHHHHHHCEEEEEEECCCCEEEECCCCCEEEEEEHHHHHCCCEEECEEEEEECCCCCCC
QMVAEHTPALGQPRRTKHHGLVAPYILGNPHDDGLAIRMGVSAGGATKHMDELFITAAAY
HHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCHHHHHHEEEEECCC
PPEVLLTGIIVNKEGKRFVAEDSYHSRTSAFVLEQPEQTAYLIVDEAHTEMPEMPLIRFL
CCHHEEEEEEECCCCCEEEECCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCHHHHH
DGYETIAEMEAALGIPAGNLAATLERYNKFATAGEDPDFHKQPEYLAAQDNGPWAVFDLS
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEEEC
LGRAMYSGFTIGGLAVSVDGEVQRADGSVVPGLYAAGACASNLAQDGKGYASGTQLGEGS
HHHHHHCCEEECCEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
FFGRRAGAHAARRAAKA
CCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11425747; 12368813; 10581551 [H]