| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is ppe32 [H]
Identifier: 41407616
GI number: 41407616
Start: 1668100
End: 1669359
Strand: Direct
Name: ppe32 [H]
Synonym: MAP1518
Alternate gene names: 41407616
Gene position: 1668100-1669359 (Clockwise)
Preceding gene: 41407615
Following gene: 41407617
Centisome position: 34.54
GC content: 73.65
Gene sequence:
>1260_bases ATGCTGGATTTCGGTGCCTATCCGCCGGAATACAACTCGGGGCGGATGTATGTCGGCGCGGGTTCGGGCCCGCTGCTGGC CGCCGCGGCGGCGTGGGACGAGCTGGCCGCGGAGTTGCAGAGCGTCGGGGCGTCGTACGGCTCGACCGTCGAGACGCTGA CCACCGGCCCGTGGACCGGGCCCTCGTCCATCGCGATGGCGGCCGCTGCCGCACCGTATGTGGCGTGGCTGCAGGCCACC GGCGCGCAGGCCGAGCAGGCCGGCGCCCAGGCCAAGCTCGCCGCCGCCGCCTATGAGACGGCCTTCGCCGCCACGGTGCC GCCGCCGGTGATCGCGGCCAACCGGGCCCTGCTCGCCACGCTGGTGGCCACCAACATGCTGGGGCAGAACACCCCGGCGA TCGCCGCCACCGAGGCGCACTACATGGAGATGTGGGCCCAGGATGCGGCCGCGATGTACGCCTATGCGGCGTCCTCGGCC AGCGCCGCCCAGCTGACACCGTTCACCGAGCCCCCGCGCACCACCAACGAGTCGGCCGGACCGCTGCAGTCGGCCGCGGT CGCCCAGAGCGCTGCGCAGTCCGGCTCCAACACCGCGGCCCACCTGTCCCAGCTGAGCGCGACCGCGCAGCCGGCGGCCC AGGCGGCCGGCAATGCCGCCTCGACGACGACCGCGTCGACCCAGCTGACGACGCCGAGTTTCATCACCAACTGGAACGAG TTCTGGTCGGTGGTGACCGGGGTGTACTCGCCGCAGTCATGGAGCACCATCCCCGGCGGCCCGTTCCTGTCGTTCGGCCA GGCCTACGCCTGGGGCCAGAACGGGCAGGGTGCCGCGGCGTATTTGGCCGGGCCGAAAGCGATTTCGGGGGCGTTGGCAC CGCTGGCCAGTGGCGGCAACGCCGTCAAGCCCATGCTGAGCTCCGCGGTCGGGGCGGGGCAGGTGTCGGGGTCGATGGGC AAGGCCGCCCTGGTCGGCAGCATGTCGGTGCCGCAGGGCTGGACGGAAGCCGCCCCGGCGATCCGGACCCTCGCCCAGGT GCTGCCCGGAAACATGGCGGCGGCACCCGCCGCGATGGCCGGCGAAGAGGGCGTGTTCAGCCAGATGGCCCTGTCCAGCC TGGCCGGCCGCGCCGTCGCCGCGGCCGCCACTCGCCCGGTCGGCGGGGCCGCCGCGGCCGCGAACTCCCTGGGTGGGGTG GCCGCCGAGGCCGACCCGGCCGCCGCCACCATCATCGTGATCCCGTGCATCGAGGAATGA
Upstream 100 bases:
>100_bases TTTGAAAGCGCTTTCGATGAATTCACTCGGCGTCGCGAATTCGTCGCTGCGGGGCGAGGGGCGGGGTGCTCGGCGTGGCG CGGGGTGGGGGAGGTCCTAA
Downstream 100 bases:
>100_bases GCACCATGATTACCGAGACCAAACCGATTGGCCGCCAATCGCTTTCCCGTCGCGCGGCCAGGTAGGGGGCAGCAGAGATG TTCTATGGGGCCTTTCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MLDFGAYPPEYNSGRMYVGAGSGPLLAAAAAWDELAAELQSVGASYGSTVETLTTGPWTGPSSIAMAAAAAPYVAWLQAT GAQAEQAGAQAKLAAAAYETAFAATVPPPVIAANRALLATLVATNMLGQNTPAIAATEAHYMEMWAQDAAAMYAYAASSA SAAQLTPFTEPPRTTNESAGPLQSAAVAQSAAQSGSNTAAHLSQLSATAQPAAQAAGNAASTTTASTQLTTPSFITNWNE FWSVVTGVYSPQSWSTIPGGPFLSFGQAYAWGQNGQGAAAYLAGPKAISGALAPLASGGNAVKPMLSSAVGAGQVSGSMG KAALVGSMSVPQGWTEAAPAIRTLAQVLPGNMAAAPAAMAGEEGVFSQMALSSLAGRAVAAAATRPVGGAAAAANSLGGV AAEADPAAATIIVIPCIEE
Sequences:
>Translated_419_residues MLDFGAYPPEYNSGRMYVGAGSGPLLAAAAAWDELAAELQSVGASYGSTVETLTTGPWTGPSSIAMAAAAAPYVAWLQAT GAQAEQAGAQAKLAAAAYETAFAATVPPPVIAANRALLATLVATNMLGQNTPAIAATEAHYMEMWAQDAAAMYAYAASSA SAAQLTPFTEPPRTTNESAGPLQSAAVAQSAAQSGSNTAAHLSQLSATAQPAAQAAGNAASTTTASTQLTTPSFITNWNE FWSVVTGVYSPQSWSTIPGGPFLSFGQAYAWGQNGQGAAAYLAGPKAISGALAPLASGGNAVKPMLSSAVGAGQVSGSMG KAALVGSMSVPQGWTEAAPAIRTLAQVLPGNMAAAPAAMAGEEGVFSQMALSSLAGRAVAAAATRPVGGAAAAANSLGGV AAEADPAAATIIVIPCIEE >Mature_419_residues MLDFGAYPPEYNSGRMYVGAGSGPLLAAAAAWDELAAELQSVGASYGSTVETLTTGPWTGPSSIAMAAAAAPYVAWLQAT GAQAEQAGAQAKLAAAAYETAFAATVPPPVIAANRALLATLVATNMLGQNTPAIAATEAHYMEMWAQDAAAMYAYAASSA SAAQLTPFTEPPRTTNESAGPLQSAAVAQSAAQSGSNTAAHLSQLSATAQPAAQAAGNAASTTTASTQLTTPSFITNWNE FWSVVTGVYSPQSWSTIPGGPFLSFGQAYAWGQNGQGAAAYLAGPKAISGALAPLASGGNAVKPMLSSAVGAGQVSGSMG KAALVGSMSVPQGWTEAAPAIRTLAQVLPGNMAAAPAAMAGEEGVFSQMALSSLAGRAVAAAATRPVGGAAAAANSLGGV AAEADPAAATIIVIPCIEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mycobacterial PPE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022171 - InterPro: IPR000030 [H]
Pfam domain/function: PF12484 PE_PPE_C; PF00823 PPE [H]
EC number: NA
Molecular weight: Translated: 41244; Mature: 41244
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDFGAYPPEYNSGRMYVGAGSGPLLAAAAAWDELAAELQSVGASYGSTVETLTTGPWTG CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCC PSSIAMAAAAAPYVAWLQATGAQAEQAGAQAKLAAAAYETAFAATVPPPVIAANRALLAT HHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LVATNMLGQNTPAIAATEAHYMEMWAQDAAAMYAYAASSASAAQLTPFTEPPRTTNESAG HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC PLQSAAVAQSAAQSGSNTAAHLSQLSATAQPAAQAAGNAASTTTASTQLTTPSFITNWNE CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCHHH FWSVVTGVYSPQSWSTIPGGPFLSFGQAYAWGQNGQGAAAYLAGPKAISGALAPLASGGN HHHHHHHCCCCCCCCCCCCCCCHHCCCCEECCCCCCCCEEEECCCHHHHHHHHHHHCCCC AVKPMLSSAVGAGQVSGSMGKAALVGSMSVPQGWTEAAPAIRTLAQVLPGNMAAAPAAMA HHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHCCHHHC GEEGVFSQMALSSLAGRAVAAAATRPVGGAAAAANSLGGVAAEADPAAATIIVIPCIEE CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEECCCC >Mature Secondary Structure MLDFGAYPPEYNSGRMYVGAGSGPLLAAAAAWDELAAELQSVGASYGSTVETLTTGPWTG CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCC PSSIAMAAAAAPYVAWLQATGAQAEQAGAQAKLAAAAYETAFAATVPPPVIAANRALLAT HHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LVATNMLGQNTPAIAATEAHYMEMWAQDAAAMYAYAASSASAAQLTPFTEPPRTTNESAG HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC PLQSAAVAQSAAQSGSNTAAHLSQLSATAQPAAQAAGNAASTTTASTQLTTPSFITNWNE CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCHHH FWSVVTGVYSPQSWSTIPGGPFLSFGQAYAWGQNGQGAAAYLAGPKAISGALAPLASGGN HHHHHHHCCCCCCCCCCCCCCCHHCCCCEECCCCCCCCEEEECCCHHHHHHHHHHHCCCC AVKPMLSSAVGAGQVSGSMGKAALVGSMSVPQGWTEAAPAIRTLAQVLPGNMAAAPAAMA HHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHCCHHHC GEEGVFSQMALSSLAGRAVAAAATRPVGGAAAAANSLGGVAAEADPAAATIIVIPCIEE CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]