| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is PE_5
Identifier: 41407612
GI number: 41407612
Start: 1664132
End: 1664431
Strand: Direct
Name: PE_5
Synonym: MAP1514
Alternate gene names: 41407612
Gene position: 1664132-1664431 (Clockwise)
Preceding gene: 41407611
Following gene: 41407613
Centisome position: 34.46
GC content: 71.67
Gene sequence:
>300_bases ATGATGTATGTCACCGCACAGCCGGAAGCCATGAATGCCGCCGCCGACCGCTTGCAGCAGATCGGCACCGCACTGGCAGC CCAGACCGGGGCCAACTCCGCGCCGATGACCGGCGTCGTCCCGGCCGCCGCCGACCCGGTCTCGCTGCTGGCCGCGGCGC GATTCGCCCAGCACGGGCAGGCTTTTCAGGCGGTCAGCGCCGAAGCGGCCGCGATCCACGAGATGTTCGTGACCACCTTG CAGACCAGCGCCGGATCGTACGCGGCCACCGAGGCCGCGAACGCGGCGGCGGCCCGCTGA
Upstream 100 bases:
>100_bases ACTTTACTCCGTGCGCCTGTGCGCCGATCGGTGGCGCTGACGCGCGCGCGGAACCTTCCCGAGCGCTCGGGCTCGCTCGC GCCTGAACAGGAGCACTCCG
Downstream 100 bases:
>100_bases GCCTTCAAGGGGGGACCCGTGATCGACTTCGCGGCGTTGCCGCCAGAGATCAATTCGGCCAGAATCTACGCCGGACCCGG ATCGGCGCCGATGATGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MMYVTAQPEAMNAAADRLQQIGTALAAQTGANSAPMTGVVPAAADPVSLLAAARFAQHGQAFQAVSAEAAAIHEMFVTTL QTSAGSYAATEAANAAAAR
Sequences:
>Translated_99_residues MMYVTAQPEAMNAAADRLQQIGTALAAQTGANSAPMTGVVPAAADPVSLLAAARFAQHGQAFQAVSAEAAAIHEMFVTTL QTSAGSYAATEAANAAAAR >Mature_99_residues MMYVTAQPEAMNAAADRLQQIGTALAAQTGANSAPMTGVVPAAADPVSLLAAARFAQHGQAFQAVSAEAAAIHEMFVTTL QTSAGSYAATEAANAAAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mycobacterial PE family. PGRS subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000084 [H]
Pfam domain/function: PF00934 PE [H]
EC number: NA
Molecular weight: Translated: 9878; Mature: 9878
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMYVTAQPEAMNAAADRLQQIGTALAAQTGANSAPMTGVVPAAADPVSLLAAARFAQHGQ CEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCH AFQAVSAEAAAIHEMFVTTLQTSAGSYAATEAANAAAAR HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC >Mature Secondary Structure MMYVTAQPEAMNAAADRLQQIGTALAAQTGANSAPMTGVVPAAADPVSLLAAARFAQHGQ CEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCH AFQAVSAEAAAIHEMFVTTLQTSAGSYAATEAANAAAAR HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]