| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407593
Identifier: 41407593
GI number: 41407593
Start: 1636927
End: 1637382
Strand: Direct
Name: 41407593
Synonym: MAP1495
Alternate gene names: NA
Gene position: 1636927-1637382 (Clockwise)
Preceding gene: 41407592
Following gene: 41407599
Centisome position: 33.89
GC content: 68.42
Gene sequence:
>456_bases TTGGCTCGAGTAGATGTGTCGGTGTCGTCGGAGTTGGAGCCCGAAACCGCCTGGAAACTGGCCTCGGACCTGGATCGGTT CGGCGAGTGGATGACGATCTTCGCCGGCTGGCGCGGCCCGGTCCCCGACACCATCGGCGAGGGCACCCGCGTCGCCTCGT GCGTCAAGGTCAAGGGATTCCGCAACGTCATCCATTGGACCGTCACCCGCTACGACGAACCGAAATCGATTGAGCTGCAA GGCCGCGGCCGGGGCGGGATCCGGCTCACCGTGGCGATGACCGTCACCGACGACCACCCGGGATCAGTCTTTCACCTCAC CGCCGACATCGACGGCGGCGTGCTCAGCGGCCCGATCGGGGGACTGGTCGCCCGGGTGCTGCGCTCGGACGTGCACAAGT CGGTGCACAACCTCGCGGCGCTGCAGCCGAGCGGGCCTAGCGCGCCGGGCGGCTGA
Upstream 100 bases:
>100_bases CAGCTGGAACAGGCCTGGCCCGGCTGAGCCCGGGGCCACGAATAGCTCCGCGGCGCTGCGGGTATCCAGCCGGGAACCCG GGGAGAAGCGGAGGATCACG
Downstream 100 bases:
>100_bases TCGTCCAGTCGCGCTGTTCCTGGCGAATCCGCCTGCGGTCCATGGCAAGCCACGCCAGCCCGGCGCCGAACGCGAGCATC GCCACGATCGCCGCCGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MARVDVSVSSELEPETAWKLASDLDRFGEWMTIFAGWRGPVPDTIGEGTRVASCVKVKGFRNVIHWTVTRYDEPKSIELQ GRGRGGIRLTVAMTVTDDHPGSVFHLTADIDGGVLSGPIGGLVARVLRSDVHKSVHNLAALQPSGPSAPGG
Sequences:
>Translated_151_residues MARVDVSVSSELEPETAWKLASDLDRFGEWMTIFAGWRGPVPDTIGEGTRVASCVKVKGFRNVIHWTVTRYDEPKSIELQ GRGRGGIRLTVAMTVTDDHPGSVFHLTADIDGGVLSGPIGGLVARVLRSDVHKSVHNLAALQPSGPSAPGG >Mature_150_residues ARVDVSVSSELEPETAWKLASDLDRFGEWMTIFAGWRGPVPDTIGEGTRVASCVKVKGFRNVIHWTVTRYDEPKSIELQG RGRGGIRLTVAMTVTDDHPGSVFHLTADIDGGVLSGPIGGLVARVLRSDVHKSVHNLAALQPSGPSAPGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019587 [H]
Pfam domain/function: PF10604 Polyketide_cyc2 [H]
EC number: NA
Molecular weight: Translated: 16113; Mature: 15982
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARVDVSVSSELEPETAWKLASDLDRFGEWMTIFAGWRGPVPDTIGEGTRVASCVKVKGF CCEECCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHH RNVIHWTVTRYDEPKSIELQGRGRGGIRLTVAMTVTDDHPGSVFHLTADIDGGVLSGPIG HHEEEEEEEECCCCCEEEEEECCCCCEEEEEEEEEECCCCCCEEEEEECCCCCEECCCHH GLVARVLRSDVHKSVHNLAALQPSGPSAPGG HHHHHHHHHHHHHHHHHHEEECCCCCCCCCC >Mature Secondary Structure ARVDVSVSSELEPETAWKLASDLDRFGEWMTIFAGWRGPVPDTIGEGTRVASCVKVKGF CEECCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHH RNVIHWTVTRYDEPKSIELQGRGRGGIRLTVAMTVTDDHPGSVFHLTADIDGGVLSGPIG HHEEEEEEEECCCCCEEEEEECCCCCEEEEEEEEEECCCCCCEEEEEECCCCCEECCCHH GLVARVLRSDVHKSVHNLAALQPSGPSAPGG HHHHHHHHHHHHHHHHHHEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]