| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is yfbK [C]
Identifier: 41407305
GI number: 41407305
Start: 1268334
End: 1269341
Strand: Direct
Name: yfbK [C]
Synonym: MAP1207
Alternate gene names: 41407305
Gene position: 1268334-1269341 (Clockwise)
Preceding gene: 41407304
Following gene: 41407306
Centisome position: 26.26
GC content: 67.96
Gene sequence:
>1008_bases ATGAGCCTGCCGTTCCTCGGCCCAATGTCGTTGTCGGGCTTCGAACATTCGTGGTTCTTCCTGTTCCTGCTGGTGGTCGC CGGGCTGGCCGCGCTGTACATCCTGATGCAGTTGGCCCGGCAGCGGCGGATGCTGCGGTTCGCCAACATGGAGCTGCTGG AAAGCGTCGCGCCCAAGCGGCCGTCCACGTGGCGGCATCTGCCGGCGATCCTGCTGGTGGCCTCGCTGGTGCTGTTCACC ATCGCGATGGCGGGCCCGACGAACGACGTCCGGATTCCCCGCAACCGCGCGGTGGTGATGCTGGTGATCGACGTGTCGCA GTCGATGCGGGCCACCGACGTCGCGCCCAACCGGATGGCGGCCGCCCAGGAGGCGGCCAAGCAGTTCGCCGACGAGCTGA CCCCCGGTATCAACCTGGGGCTGATCGCCTATGCCGGAACTGCGACGGTGCTGGTGTCGCCGACGACCAACCGGGAGGCC ACCAAGAACGCGTTGGACAAGCTGCAGTTCGCCGACCGCACCGCCACCGGCGAGGGCATCTTCACCGCCCTGCAGGCGAT CGCGACGGTGGGCGCGGTGATCGGCGGCGGCGACAAGCCGCCGCCGGCGCGCATCGTGTTGTTCTCCGACGGCAAGGAGA CGATGCCGACCAATCCGGACAACCCGAAGGGCGCCTTCACCGCCGCGCGCACCGCCAAGGATCAGGGCGTGCCGATCTCG ACCATCTCGTTCGGCACCCCGTACGGGTTCGTGGAGATCAACGACCAGCGCCAGCCGGTGCCGGTCGATGACGAGACGTT GAAGAAGGTGGCCCAGCTCTCCGGCGGAAACGCTTACAACGCAGCGTCATTGCAGGAGCTGAAGTCGGTGTACGCGACGC TGCAGCAGCAGATCGGCTACGAGACCATCAAGGGCGACGCGAGCGTGGGCTGGGTGCGGCTGGGTGCGCTGGTGCTGGCG CTGGCCGCGCTGACCGCGCTGCTCATCAACCGCCGCCTGCCCACCTAG
Upstream 100 bases:
>100_bases ATCCTGACGCTGCGCACCGACCGCGACTGGATCGCCGACATCGTGCGGTTCGTGGAATCCCGCCGGCGCGGGGCATTGGC AGGGCGGCAGTGACTCGAAT
Downstream 100 bases:
>100_bases GTGGGGCGCGCCCGCCGGCCGCGCCCTCTTCGCCGCGCTGCGCCCTCTTCGCCGCGCTCGTAACGCCACGGCGGAATCTC GGCCGGATTTCCGCCCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MSLPFLGPMSLSGFEHSWFFLFLLVVAGLAALYILMQLARQRRMLRFANMELLESVAPKRPSTWRHLPAILLVASLVLFT IAMAGPTNDVRIPRNRAVVMLVIDVSQSMRATDVAPNRMAAAQEAAKQFADELTPGINLGLIAYAGTATVLVSPTTNREA TKNALDKLQFADRTATGEGIFTALQAIATVGAVIGGGDKPPPARIVLFSDGKETMPTNPDNPKGAFTAARTAKDQGVPIS TISFGTPYGFVEINDQRQPVPVDDETLKKVAQLSGGNAYNAASLQELKSVYATLQQQIGYETIKGDASVGWVRLGALVLA LAALTALLINRRLPT
Sequences:
>Translated_335_residues MSLPFLGPMSLSGFEHSWFFLFLLVVAGLAALYILMQLARQRRMLRFANMELLESVAPKRPSTWRHLPAILLVASLVLFT IAMAGPTNDVRIPRNRAVVMLVIDVSQSMRATDVAPNRMAAAQEAAKQFADELTPGINLGLIAYAGTATVLVSPTTNREA TKNALDKLQFADRTATGEGIFTALQAIATVGAVIGGGDKPPPARIVLFSDGKETMPTNPDNPKGAFTAARTAKDQGVPIS TISFGTPYGFVEINDQRQPVPVDDETLKKVAQLSGGNAYNAASLQELKSVYATLQQQIGYETIKGDASVGWVRLGALVLA LAALTALLINRRLPT >Mature_334_residues SLPFLGPMSLSGFEHSWFFLFLLVVAGLAALYILMQLARQRRMLRFANMELLESVAPKRPSTWRHLPAILLVASLVLFTI AMAGPTNDVRIPRNRAVVMLVIDVSQSMRATDVAPNRMAAAQEAAKQFADELTPGINLGLIAYAGTATVLVSPTTNREAT KNALDKLQFADRTATGEGIFTALQAIATVGAVIGGGDKPPPARIVLFSDGKETMPTNPDNPKGAFTAARTAKDQGVPIST ISFGTPYGFVEINDQRQPVPVDDETLKKVAQLSGGNAYNAASLQELKSVYATLQQQIGYETIKGDASVGWVRLGALVLAL AALTALLINRRLPT
Specific function: Unknown
COG id: COG2304
COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1207_MYCPA (Q740Y5)
Other databases:
- EMBL: AE016958 - RefSeq: NP_960141.1 - ProteinModelPortal: Q740Y5 - EnsemblBacteria: EBMYCT00000039171 - GeneID: 2719288 - GenomeReviews: AE016958_GR - KEGG: mpa:MAP1207 - NMPDR: fig|262316.1.peg.1207 - GeneTree: EBGT00050000017035 - HOGENOM: HBG480772 - OMA: IGFEGWS - ProtClustDB: PRK13685 - HAMAP: MF_01340 - InterPro: IPR022933 - InterPro: IPR002035 - SMART: SM00327
Pfam domain/function: PF00092 VWA
EC number: NA
Molecular weight: Translated: 35889; Mature: 35758
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: PS50234 VWFA; PS00583 PFKB_KINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xe26a600)-; HASH(0xe1da3d0)-; HASH(0xc6976f0)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPFLGPMSLSGFEHSWFFLFLLVVAGLAALYILMQLARQRRMLRFANMELLESVAPKR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PSTWRHLPAILLVASLVLFTIAMAGPTNDVRIPRNRAVVMLVIDVSQSMRATDVAPNRMA CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCHHHHCCCCHHHH AAQEAAKQFADELTPGINLGLIAYAGTATVLVSPTTNREATKNALDKLQFADRTATGEGI HHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHH FTALQAIATVGAVIGGGDKPPPARIVLFSDGKETMPTNPDNPKGAFTAARTAKDQGVPIS HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEE TISFGTPYGFVEINDQRQPVPVDDETLKKVAQLSGGNAYNAASLQELKSVYATLQQQIGY EEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC ETIKGDASVGWVRLGALVLALAALTALLINRRLPT CEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH >Mature Secondary Structure SLPFLGPMSLSGFEHSWFFLFLLVVAGLAALYILMQLARQRRMLRFANMELLESVAPKR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PSTWRHLPAILLVASLVLFTIAMAGPTNDVRIPRNRAVVMLVIDVSQSMRATDVAPNRMA CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCHHHHCCCCHHHH AAQEAAKQFADELTPGINLGLIAYAGTATVLVSPTTNREATKNALDKLQFADRTATGEGI HHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHH FTALQAIATVGAVIGGGDKPPPARIVLFSDGKETMPTNPDNPKGAFTAARTAKDQGVPIS HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEE TISFGTPYGFVEINDQRQPVPVDDETLKKVAQLSGGNAYNAASLQELKSVYATLQQQIGY EEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC ETIKGDASVGWVRLGALVLALAALTALLINRRLPT CEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA