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The map label for this gene is iap [H]

Identifier: 41407302

GI number: 41407302

Start: 1265380

End: 1266114

Strand: Direct

Name: iap [H]

Synonym: MAP1204

Alternate gene names: 41407302

Gene position: 1265380-1266114 (Clockwise)

Preceding gene: 41407301

Following gene: 41407303

Centisome position: 26.2

GC content: 70.48

Gene sequence:

>735_bases
ATGCGCCGCAACCGGTTTCGTCTCATCGTCTTCGCCTGGATCACCGCGATGGTGACCGGGCTGATGTTTTCCGTGGCACC
GACGCCGGCCGCGCTGGCCGACCCCGGCGAGTGGGATCCCACCCTGCCGGCCCAGATCAGTGCCGGCGCCCCGGGCGATC
CGCTCGCCGTCGCCAACGCCTCGCTGCAGGCCACCGCGCAGGCCACCCAGACCACGCTGAACCTGGGCAAGCAATTCCTC
GGCGGGCTCGGCATCAACCTGGGCGGCAACGACGCGCCCGCGGCCGCGGCCACGCCGTCCAACCCGGGCGGCAAGATCCC
GCGGGTCTACGGCCGGCAGGCCATCGAGTACGTGATCAAGCGGATGGGGTCGCAGATGGGGGTGCCGTACTCGTGGGGCG
GCGGCTCGCTGGACGGTCCCAGCAAGGGTGTCGGCGACGGCGCCAACATCACCGGGTTCGACTGCTCGGGGCTGATGCGC
TACGGCTTCGCCGGGGTCGGCGTGCTGATCCCGCGGTTCTCCGGCGACCAGTACAACGCCGGGCGTCACATCCCGCAGGA
TCAGGCCCGCCGCGGCGACCTCATCTTCTACGGCCCGGGCGGGTCCCAGCACGTCACCATGTACCTGGGCAACGGGCAGA
TGCTCGAGGCGTCCGGCAGCGCCGGCAAGGTCACCGTCAGCCCGGTGCGCAAGCCCGGCATGACACCGTTCCTGACTAGG
ATCATCGAGTACTGA

Upstream 100 bases:

>100_bases
GGGTTGAAGGTCCGCGTCGCCCCCGTCCGCACCAGCGGCATGACGCCCTACGTGGTCCGTTACATCGAGTGGTGAGCAAG
TGAGCAGTGAACGAGGAGCC

Downstream 100 bases:

>100_bases
TCGCGGGCCGGCCCGGCCATCGGCTGGGCGAGCGTCGACGGAATTCGGCGGGCCTGGAATAGTTGGACGAGGGCACGTCG
CTGCCCGGCAGTCGTGTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Invasion-associated protein [H]

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MRRNRFRLIVFAWITAMVTGLMFSVAPTPAALADPGEWDPTLPAQISAGAPGDPLAVANASLQATAQATQTTLNLGKQFL
GGLGINLGGNDAPAAAATPSNPGGKIPRVYGRQAIEYVIKRMGSQMGVPYSWGGGSLDGPSKGVGDGANITGFDCSGLMR
YGFAGVGVLIPRFSGDQYNAGRHIPQDQARRGDLIFYGPGGSQHVTMYLGNGQMLEASGSAGKVTVSPVRKPGMTPFLTR
IIEY

Sequences:

>Translated_244_residues
MRRNRFRLIVFAWITAMVTGLMFSVAPTPAALADPGEWDPTLPAQISAGAPGDPLAVANASLQATAQATQTTLNLGKQFL
GGLGINLGGNDAPAAAATPSNPGGKIPRVYGRQAIEYVIKRMGSQMGVPYSWGGGSLDGPSKGVGDGANITGFDCSGLMR
YGFAGVGVLIPRFSGDQYNAGRHIPQDQARRGDLIFYGPGGSQHVTMYLGNGQMLEASGSAGKVTVSPVRKPGMTPFLTR
IIEY
>Mature_244_residues
MRRNRFRLIVFAWITAMVTGLMFSVAPTPAALADPGEWDPTLPAQISAGAPGDPLAVANASLQATAQATQTTLNLGKQFL
GGLGINLGGNDAPAAAATPSNPGGKIPRVYGRQAIEYVIKRMGSQMGVPYSWGGGSLDGPSKGVGDGANITGFDCSGLMR
YGFAGVGVLIPRFSGDQYNAGRHIPQDQARRGDLIFYGPGGSQHVTMYLGNGQMLEASGSAGKVTVSPVRKPGMTPFLTR
IIEY

Specific function: This major extracellular protein may be involved in the invasion of non-professional phagocytic cells by Listeria [H]

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 LysM repeats [H]

Homologues:

Organism=Escherichia coli, GI1786421, Length=123, Percent_Identity=30.8943089430894, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1787944, Length=124, Percent_Identity=29.8387096774194, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064
- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR003646
- InterPro:   IPR013247 [H]

Pfam domain/function: PF01476 LysM; PF00877 NLPC_P60; PF08239 SH3_3 [H]

EC number: NA

Molecular weight: Translated: 25415; Mature: 25415

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRNRFRLIVFAWITAMVTGLMFSVAPTPAALADPGEWDPTLPAQISAGAPGDPLAVANA
CCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEECC
SLQATAQATQTTLNLGKQFLGGLGINLGGNDAPAAAATPSNPGGKIPRVYGRQAIEYVIK
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RMGSQMGVPYSWGGGSLDGPSKGVGDGANITGFDCSGLMRYGFAGVGVLIPRFSGDQYNA
HHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCC
GRHIPQDQARRGDLIFYGPGGSQHVTMYLGNGQMLEASGSAGKVTVSPVRKPGMTPFLTR
CCCCCHHHHCCCCEEEECCCCCCEEEEEECCCEEEECCCCCCEEEECCCCCCCCCHHHHH
IIEY
HHCC
>Mature Secondary Structure
MRRNRFRLIVFAWITAMVTGLMFSVAPTPAALADPGEWDPTLPAQISAGAPGDPLAVANA
CCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEECC
SLQATAQATQTTLNLGKQFLGGLGINLGGNDAPAAAATPSNPGGKIPRVYGRQAIEYVIK
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RMGSQMGVPYSWGGGSLDGPSKGVGDGANITGFDCSGLMRYGFAGVGVLIPRFSGDQYNA
HHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCC
GRHIPQDQARRGDLIFYGPGGSQHVTMYLGNGQMLEASGSAGKVTVSPVRKPGMTPFLTR
CCCCCHHHHCCCCEEEECCCCCCEEEEEECCCEEEECCCCCCEEEECCCCCCCCCHHHHH
IIEY
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1514809; 1459966 [H]