| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41407112
Identifier: 41407112
GI number: 41407112
Start: 1059971
End: 1060558
Strand: Direct
Name: 41407112
Synonym: MAP1014
Alternate gene names: NA
Gene position: 1059971-1060558 (Clockwise)
Preceding gene: 41407109
Following gene: 41407113
Centisome position: 21.95
GC content: 72.96
Gene sequence:
>588_bases GTGCCCGCCGCCACCCTGGCTGCCCTGCGCCCGCCTTTCCCGTCGTCGCCGTCGCCGGGTCCGACCCGGTTGCGGGTGCC CGACCTGCTCTATGCCACCGATCAGGCCGCCGACGACGTGCTCAGCGGGCGCTGCGACCACCTGCTGCCCCCGGGCGGCA TCCCGGCGTCGCGGCGCTGGTTCACCCGCATCCACGGCGACGAGGAGCTCGACGTCTGGCTGATCAGCTGGGTGCCCGGC CACCCGACCGAACTGCACGACCACGGCGGGTCGCTGGGCGCGTTGACCGTCGTCTCCGGATCACTCAACGAATACCGTTG GGACGGTAGGGCTTTGCGACGCCGCCGGCTCGACGCCGGCGATCAGGCCGGCTTCCCGCTGGGCTGGGTGCACGACGTGG TGTGGGCGCCCCGGCCGGTCAGCGGGCCGGTCAGCCGTCGGGCCGTCGCCGCCGCCCAGGCGGCGCCGACGCTGAGCGTG CACGCCTACTCGCCGCCGCTGACCGCGATGTCCTACTACGACATCACTGAGCGCAAGACGCTGCGTCGGCAACGCACCGA ACTGACCGACCAGCCGGAAGGATCGTGA
Upstream 100 bases:
>100_bases GGCTGCCGTGATGGAGCGCTTCGGATTTTGCGAGTGTTGTCGGCCGTAACACGCCGCCGCCCGATCCGTTTTCGCTTCCT GGAGTTCTTTCCTCATGCCT
Downstream 100 bases:
>100_bases TGAGCCGCATCGACGTCGTGTTGAGGTCCGCCCGGCGCCGGTTCCGCCGGCTGCCCGCCGTCGAAGTGCCCGACGCGGTG CGCCGCGGCGCGGTGCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Cysteine Dioxygenase; Cysteine Dioxygenase Type I Superfamily Protein
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MPAATLAALRPPFPSSPSPGPTRLRVPDLLYATDQAADDVLSGRCDHLLPPGGIPASRRWFTRIHGDEELDVWLISWVPG HPTELHDHGGSLGALTVVSGSLNEYRWDGRALRRRRLDAGDQAGFPLGWVHDVVWAPRPVSGPVSRRAVAAAQAAPTLSV HAYSPPLTAMSYYDITERKTLRRQRTELTDQPEGS
Sequences:
>Translated_195_residues MPAATLAALRPPFPSSPSPGPTRLRVPDLLYATDQAADDVLSGRCDHLLPPGGIPASRRWFTRIHGDEELDVWLISWVPG HPTELHDHGGSLGALTVVSGSLNEYRWDGRALRRRRLDAGDQAGFPLGWVHDVVWAPRPVSGPVSRRAVAAAQAAPTLSV HAYSPPLTAMSYYDITERKTLRRQRTELTDQPEGS >Mature_194_residues PAATLAALRPPFPSSPSPGPTRLRVPDLLYATDQAADDVLSGRCDHLLPPGGIPASRRWFTRIHGDEELDVWLISWVPGH PTELHDHGGSLGALTVVSGSLNEYRWDGRALRRRRLDAGDQAGFPLGWVHDVVWAPRPVSGPVSRRAVAAAQAAPTLSVH AYSPPLTAMSYYDITERKTLRRQRTELTDQPEGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21322; Mature: 21191
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAATLAALRPPFPSSPSPGPTRLRVPDLLYATDQAADDVLSGRCDHLLPPGGIPASRRW CCCCCCHHHCCCCCCCCCCCCCEEECCHHEECCCHHHHHHHCCCCCCCCCCCCCCCCCHH FTRIHGDEELDVWLISWVPGHPTELHDHGGSLGALTVVSGSLNEYRWDGRALRRRRLDAG HEEECCCCCEEEEEEEECCCCCCCHHCCCCCEEEEEEEECCCHHHCCCHHHHHHHHCCCC DQAGFPLGWVHDVVWAPRPVSGPVSRRAVAAAQAAPTLSVHAYSPPLTAMSYYDITERKT CCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCEEEECCHHHHHH LRRQRTELTDQPEGS HHHHHHHCCCCCCCC >Mature Secondary Structure PAATLAALRPPFPSSPSPGPTRLRVPDLLYATDQAADDVLSGRCDHLLPPGGIPASRRW CCCCCHHHCCCCCCCCCCCCCEEECCHHEECCCHHHHHHHCCCCCCCCCCCCCCCCCHH FTRIHGDEELDVWLISWVPGHPTELHDHGGSLGALTVVSGSLNEYRWDGRALRRRRLDAG HEEECCCCCEEEEEEEECCCCCCCHHCCCCCEEEEEEEECCCHHHCCCHHHHHHHHCCCC DQAGFPLGWVHDVVWAPRPVSGPVSRRAVAAAQAAPTLSVHAYSPPLTAMSYYDITERKT CCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCEEEECCHHHHHH LRRQRTELTDQPEGS HHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA