| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407053
Identifier: 41407053
GI number: 41407053
Start: 988794
End: 989747
Strand: Direct
Name: 41407053
Synonym: MAP0955
Alternate gene names: NA
Gene position: 988794-989747 (Clockwise)
Preceding gene: 41407052
Following gene: 41407054
Centisome position: 20.47
GC content: 74.32
Gene sequence:
>954_bases TTGCGGCGGGTTGAGCTCGCCGGAGGGCAATTGACGGTCAGCGCAATGGGTTTCGGGTGCGGCGCGCTGATGCAGTCGCC GTCGCGCAAGGACCGGATGGCGGTGCTCAGCGCCGCGCTCGACAGCGGCATCACCCATTTCGACACCGCACGCATGTACG GGCTGGGGCGGGCGGAGGCGGAGCTCGGGACCTTCCTGCGCACCGTCGACCGGGACAGCGTCACCATCGCCACCAAGTTC GGCATCGACGTCGGCGGCGCGGCCCGCCGGCTCGGCCGCTTCCAGGCGCCGGCGCGCGCACTGCTGAAAAAGGCGCCCAC GCTGCGCCGCATCGTCAAGCGGCAGCAGGAACCCCCGGCGACCGCCCGGGTGTACGACGCCGCCGGCGCGGCGCGCAGCC TGGAGCGCAGTCTGACGGCCCTCGGGGTCGATTACGTCGACATTCTCTTCGTCCATGCCCCCCGGCCCCAGGACACGGTC GCCGCCGCGCAACTGTGCGAATTCTTCGAGCGCGCCCGCGGGCAGGGCAAAATCCGCGCCTGGGGGGTTTCCCAGGACGA GGGGCTCGAGGTCGACTTCGCCCGCGCATTCGCCCCGCACGGGATCAGCCAGCTGCGCAGCGACCTGCTCGACCCCGCCC CGCGCGCGGCCGATCTTGCGTTCGCGGTGCTGCGCCGGCCGCACGCCGCCCTGTCCACGGCCCTGCGGGCCGACCCCGAG CTGGCGGGCCGCTGGCGCCGGGCCCTGCAGCTCGACCCGCTGGCACCCGGTGTGCTCGCCCGGCTGATCCTCGCCGCGTC GGCTACCGCAACCGGTTGCCGCGCAATCATTTACAGCACCACGCGGCCGCCGCGGGTGGCCGAGGCGGCGGCCGCCGTCG CCGCCCCGGACGCCGAGACCGTCGCGCGGTTCCTCGCCCTGGTCACCGAGTTCCGCGGGGGGCGGGCCGGATGA
Upstream 100 bases:
>100_bases GCGCAGCGGGACGGGTTACGCGGTCAACAACACATCGCGGCCACCCGCAGCCCGCGCGTCATCGACGCCGAGCTGCGCCG CATCTACCAGGGCTGCGACG
Downstream 100 bases:
>100_bases TCCGCGGCGCGCGGGACTTCACCCCCGGCATGACCATCACCACCGACGTGGCGGTCGTCGGGTCCGGCCCGATCGGCATC GTGACCGCGCTGGAACTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Aldo/Keto Reductase; Pyridoxal 4-Dehydrogenase; D-Threo-Aldose 1-Dehydrogenase; D-Threo-Aldose 1-Dehydrogenase Protein; Aldo/Keto Reductase Family Oxidoreductase; Aldo-Keto Reductase Yakc
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MRRVELAGGQLTVSAMGFGCGALMQSPSRKDRMAVLSAALDSGITHFDTARMYGLGRAEAELGTFLRTVDRDSVTIATKF GIDVGGAARRLGRFQAPARALLKKAPTLRRIVKRQQEPPATARVYDAAGAARSLERSLTALGVDYVDILFVHAPRPQDTV AAAQLCEFFERARGQGKIRAWGVSQDEGLEVDFARAFAPHGISQLRSDLLDPAPRAADLAFAVLRRPHAALSTALRADPE LAGRWRRALQLDPLAPGVLARLILAASATATGCRAIIYSTTRPPRVAEAAAAVAAPDAETVARFLALVTEFRGGRAG
Sequences:
>Translated_317_residues MRRVELAGGQLTVSAMGFGCGALMQSPSRKDRMAVLSAALDSGITHFDTARMYGLGRAEAELGTFLRTVDRDSVTIATKF GIDVGGAARRLGRFQAPARALLKKAPTLRRIVKRQQEPPATARVYDAAGAARSLERSLTALGVDYVDILFVHAPRPQDTV AAAQLCEFFERARGQGKIRAWGVSQDEGLEVDFARAFAPHGISQLRSDLLDPAPRAADLAFAVLRRPHAALSTALRADPE LAGRWRRALQLDPLAPGVLARLILAASATATGCRAIIYSTTRPPRVAEAAAAVAAPDAETVARFLALVTEFRGGRAG >Mature_317_residues MRRVELAGGQLTVSAMGFGCGALMQSPSRKDRMAVLSAALDSGITHFDTARMYGLGRAEAELGTFLRTVDRDSVTIATKF GIDVGGAARRLGRFQAPARALLKKAPTLRRIVKRQQEPPATARVYDAAGAARSLERSLTALGVDYVDILFVHAPRPQDTV AAAQLCEFFERARGQGKIRAWGVSQDEGLEVDFARAFAPHGISQLRSDLLDPAPRAADLAFAVLRRPHAALSTALRADPE LAGRWRRALQLDPLAPGVLARLILAASATATGCRAIIYSTTRPPRVAEAAAAVAAPDAETVARFLALVTEFRGGRAG
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33805; Mature: 33805
Theoretical pI: Translated: 11.09; Mature: 11.09
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVELAGGQLTVSAMGFGCGALMQSPSRKDRMAVLSAALDSGITHFDTARMYGLGRAEA CCEEEECCCEEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHH ELGTFLRTVDRDSVTIATKFGIDVGGAARRLGRFQAPARALLKKAPTLRRIVKRQQEPPA HHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCC TARVYDAAGAARSLERSLTALGVDYVDILFVHAPRPQDTVAAAQLCEFFERARGQGKIRA HHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEE WGVSQDEGLEVDFARAFAPHGISQLRSDLLDPAPRAADLAFAVLRRPHAALSTALRADPE ECCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHCCHH LAGRWRRALQLDPLAPGVLARLILAASATATGCRAIIYSTTRPPRVAEAAAAVAAPDAET HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHH VARFLALVTEFRGGRAG HHHHHHHHHHHCCCCCC >Mature Secondary Structure MRRVELAGGQLTVSAMGFGCGALMQSPSRKDRMAVLSAALDSGITHFDTARMYGLGRAEA CCEEEECCCEEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHH ELGTFLRTVDRDSVTIATKFGIDVGGAARRLGRFQAPARALLKKAPTLRRIVKRQQEPPA HHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCC TARVYDAAGAARSLERSLTALGVDYVDILFVHAPRPQDTVAAAQLCEFFERARGQGKIRA HHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEE WGVSQDEGLEVDFARAFAPHGISQLRSDLLDPAPRAADLAFAVLRRPHAALSTALRADPE ECCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHCCHH LAGRWRRALQLDPLAPGVLARLILAASATATGCRAIIYSTTRPPRVAEAAAAVAAPDAET HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHH VARFLALVTEFRGGRAG HHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA