| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407039
Identifier: 41407039
GI number: 41407039
Start: 970170
End: 970703
Strand: Direct
Name: 41407039
Synonym: MAP0941
Alternate gene names: NA
Gene position: 970170-970703 (Clockwise)
Preceding gene: 41407038
Following gene: 41407040
Centisome position: 20.09
GC content: 70.79
Gene sequence:
>534_bases GTGCGCCTGCGGCAGCCGCAGCGACGGGCCGCCGCCGCGGCGCCGCAGCGCGAACGCGCGGGTGGCGCCCAGGCTGACGA TCGCCACCATGGTGTCCTCGGAACTGCTGCGGCCGATGGTGTCGCCATGCCAGGCCACGCTGTCCGAGCCGTCCCGATAA CAGCACAGCCCCACCGTGGTGAACGGCTCGCCGAGTTCGCCGGCGTAGATGTCGTTGAGCCGGCGGCGCAGCCGGGACAG CATCGGATGCGGCGGCTCGTCGACCGTGAGGTCGTGAAAGCTCACCAGCCGCGGCACGTCGACCACCCGGTCGTACATCT GCCGGCGTTCCTCCCGCCACGGCACCGTCGACAGCAGGGCATCGAGCAGATCATCGGCGTCGGTGAGCCAGCCGGCGCGG ATTTCGATGAAGGCGCCGTCGCCGAGCTGCCGGCGCTCGGTGTGCTGGAACAGGGAGCCTTGAACCGCGATCTCCACGCG ACCCAGTTTATCGCACATCCGTTCGATCCCGAGGCCGCGGCGGCGGGCGTGTGA
Upstream 100 bases:
>100_bases GGAATTGGATGCTCACCCGCGGCCCGACCGGCGCCGTCGTCTTGGGCACGGCATGCTCCCAGGTGCGCTGGCACGAGCCG CCTATCACCAGCAGGTCCCC
Downstream 100 bases:
>100_bases CGGCCCATGCCGCCCTCCGCGCCGCTACGGTTGAACCTGTGGGCGTGGTTGAGCTGGGCACCAATTCCGAGGTGGGCGCG CTGCGGGTGGTCATCCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MRLRQPQRRAAAAAPQRERAGGAQADDRHHGVLGTAAADGVAMPGHAVRAVPITAQPHRGERLAEFAGVDVVEPAAQPGQ HRMRRLVDREVVKAHQPRHVDHPVVHLPAFLPPRHRRQQGIEQIIGVGEPAGADFDEGAVAELPALGVLEQGALNRDLHA TQFIAHPFDPEAAAAGV
Sequences:
>Translated_177_residues MRLRQPQRRAAAAAPQRERAGGAQADDRHHGVLGTAAADGVAMPGHAVRAVPITAQPHRGERLAEFAGVDVVEPAAQPGQ HRMRRLVDREVVKAHQPRHVDHPVVHLPAFLPPRHRRQQGIEQIIGVGEPAGADFDEGAVAELPALGVLEQGALNRDLHA TQFIAHPFDPEAAAAGV >Mature_177_residues MRLRQPQRRAAAAAPQRERAGGAQADDRHHGVLGTAAADGVAMPGHAVRAVPITAQPHRGERLAEFAGVDVVEPAAQPGQ HRMRRLVDREVVKAHQPRHVDHPVVHLPAFLPPRHRRQQGIEQIIGVGEPAGADFDEGAVAELPALGVLEQGALNRDLHA TQFIAHPFDPEAAAAGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18909; Mature: 18909
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRQPQRRAAAAAPQRERAGGAQADDRHHGVLGTAAADGVAMPGHAVRAVPITAQPHRG CCCCCHHHHHHHCCCCHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCC ERLAEFAGVDVVEPAAQPGQHRMRRLVDREVVKAHQPRHVDHPVVHLPAFLPPRHRRQQG HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHH IEQIIGVGEPAGADFDEGAVAELPALGVLEQGALNRDLHATQFIAHPFDPEAAAAGV HHHHHCCCCCCCCCCCCCCHHHCCCCCHHHCCCCCCCCHHHHHHCCCCCCCHHCCCC >Mature Secondary Structure MRLRQPQRRAAAAAPQRERAGGAQADDRHHGVLGTAAADGVAMPGHAVRAVPITAQPHRG CCCCCHHHHHHHCCCCHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCC ERLAEFAGVDVVEPAAQPGQHRMRRLVDREVVKAHQPRHVDHPVVHLPAFLPPRHRRQQG HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHH IEQIIGVGEPAGADFDEGAVAELPALGVLEQGALNRDLHATQFIAHPFDPEAAAAGV HHHHHCCCCCCCCCCCCCCHHHCCCCCHHHCCCCCCCCHHHHHHCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA