Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is sgcX [C]

Identifier: 41407032

GI number: 41407032

Start: 963875

End: 965008

Strand: Direct

Name: sgcX [C]

Synonym: MAP0934

Alternate gene names: 41407032

Gene position: 963875-965008 (Clockwise)

Preceding gene: 41407031

Following gene: 41407033

Centisome position: 19.96

GC content: 69.31

Gene sequence:

>1134_bases
ATGGCGCACCGCGACCGCGACTCGACCGACGAGCTGCTGCAAGAACTGCTGTGGACCTACGGGCCGTGCGGGCAGGAGGA
CGCGGTGCGCGCCGTCATCGCCCGCGAATTGGAACCCGTCGTCGACGACCTGTGGACCGACGACGCCGGCAACCTGATCG
GCTACGTCGCCGCCGACGCATCGCGGGGCGATGCCGGGGCGCCCGACCACCGGCACCGGACCGCGGCGATCCCCGGCACC
GCCACCCGGGTCATGGCCCACATGGACGAGCTGTCCATGATCGTCAAACGGGTAGAACCCGATGGCACACTGCATTTGAC
GCAGCTGGGCACCATGTACCCGGGCAACTTCGGGCTGGGTCCGGTCGCCGTGCTCGGCGACAACGAAACCCTCACCGCGG
TACTGACTCTCGGCTCCGAACACACCACCAAGGAAAGCTCACGAATCTGGGAGACCAAGCCCGATCAGGGTGACCGATCG
CTGGACTGGCATCACGTCTACGTCTTCACCGGCCGCAGCACCGACGAATTGGCCGCCGCGGGAGTGCACGCCGGCACCCG
GGTGTGCGTGGACCGCAGCAAGAGATCGGTGGTCGAGATCGGCGACTACGTCGGCGCCTACTTCCTCGATGACCGCGCCG
CAGTGACCGCGCTGCTCAACGCCGCCCGGATGCTGCGCGAACGCGGACAACGCCCCGCCGACGACGTGTACCTGGTGTTC
ACCGCCAACGAAGAGATCGGCGGGGTGGGCGGCGCCTACGCCAGCGCCACCCTGCCCGGCGACCTGACCCTCGCGCTGGA
AGTCGGCCCCACCGAACGCGAATACACCACCAGCGTCGCCGGCGGCCCGATCGTCGGTTACAGCGACGCGCTGTGCGTCT
ACGACAAAAGCGTCGCCGACCGGCTGCTGAAAATCGCCACCGACCGCGGACTGACGCCGCAGCCGGCGGCGCTGGGCGCC
TTCGAATCCGACGCGTCGCACGCCAAGGCAAGCGGGCTGACCGCCCGCGCCGGCCTGCTGTGCCTGCCCACGCTGAGCAC
CCACGGCTACGAGGTGGTCGCGCGCAGCGCGATCGACGACATGGCCGCCATCGTGGTCGATTTCGTACTGCAGCCGGGCC
GGCCGAACGGCTGA

Upstream 100 bases:

>100_bases
CGCCCACGAGCTGGGGGTGGCACTGGCCTGAGTCGAGGCGGTTGGAGTGGCCGCAGGCCGGCGCGGGTACAGATGCTCTG
AACCTGATCGAGAGGATCCG

Downstream 100 bases:

>100_bases
CGCGGAGTCGGCCAAAACACCTCAACCCCGCTGGTCACCCTGTTAGTCTGGCGACGCTTCCGGACGCAGAACGATGGGGT
TGGCATGTGGCACACGTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MAHRDRDSTDELLQELLWTYGPCGQEDAVRAVIARELEPVVDDLWTDDAGNLIGYVAADASRGDAGAPDHRHRTAAIPGT
ATRVMAHMDELSMIVKRVEPDGTLHLTQLGTMYPGNFGLGPVAVLGDNETLTAVLTLGSEHTTKESSRIWETKPDQGDRS
LDWHHVYVFTGRSTDELAAAGVHAGTRVCVDRSKRSVVEIGDYVGAYFLDDRAAVTALLNAARMLRERGQRPADDVYLVF
TANEEIGGVGGAYASATLPGDLTLALEVGPTEREYTTSVAGGPIVGYSDALCVYDKSVADRLLKIATDRGLTPQPAALGA
FESDASHAKASGLTARAGLLCLPTLSTHGYEVVARSAIDDMAAIVVDFVLQPGRPNG

Sequences:

>Translated_377_residues
MAHRDRDSTDELLQELLWTYGPCGQEDAVRAVIARELEPVVDDLWTDDAGNLIGYVAADASRGDAGAPDHRHRTAAIPGT
ATRVMAHMDELSMIVKRVEPDGTLHLTQLGTMYPGNFGLGPVAVLGDNETLTAVLTLGSEHTTKESSRIWETKPDQGDRS
LDWHHVYVFTGRSTDELAAAGVHAGTRVCVDRSKRSVVEIGDYVGAYFLDDRAAVTALLNAARMLRERGQRPADDVYLVF
TANEEIGGVGGAYASATLPGDLTLALEVGPTEREYTTSVAGGPIVGYSDALCVYDKSVADRLLKIATDRGLTPQPAALGA
FESDASHAKASGLTARAGLLCLPTLSTHGYEVVARSAIDDMAAIVVDFVLQPGRPNG
>Mature_376_residues
AHRDRDSTDELLQELLWTYGPCGQEDAVRAVIARELEPVVDDLWTDDAGNLIGYVAADASRGDAGAPDHRHRTAAIPGTA
TRVMAHMDELSMIVKRVEPDGTLHLTQLGTMYPGNFGLGPVAVLGDNETLTAVLTLGSEHTTKESSRIWETKPDQGDRSL
DWHHVYVFTGRSTDELAAAGVHAGTRVCVDRSKRSVVEIGDYVGAYFLDDRAAVTALLNAARMLRERGQRPADDVYLVFT
ANEEIGGVGGAYASATLPGDLTLALEVGPTEREYTTSVAGGPIVGYSDALCVYDKSVADRLLKIATDRGLTPQPAALGAF
ESDASHAKASGLTARAGLLCLPTLSTHGYEVVARSAIDDMAAIVVDFVLQPGRPNG

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

Organism=Escherichia coli, GI87082417, Length=267, Percent_Identity=25.4681647940075, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: NA

Molecular weight: Translated: 40170; Mature: 40039

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHRDRDSTDELLQELLWTYGPCGQEDAVRAVIARELEPVVDDLWTDDAGNLIGYVAADA
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
SRGDAGAPDHRHRTAAIPGTATRVMAHMDELSMIVKRVEPDGTLHLTQLGTMYPGNFGLG
CCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC
PVAVLGDNETLTAVLTLGSEHTTKESSRIWETKPDQGDRSLDWHHVYVFTGRSTDELAAA
CEEEECCCCEEEEEEEECCCCCCCHHCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHH
GVHAGTRVCVDRSKRSVVEIGDYVGAYFLDDRAAVTALLNAARMLRERGQRPADDVYLVF
CCCCCCCEECCCCCCHHHHHHHHHCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
TANEEIGGVGGAYASATLPGDLTLALEVGPTEREYTTSVAGGPIVGYSDALCVYDKSVAD
ECCCCCCCCCCCHHCCCCCCCEEEEEEECCCCCHHHHCCCCCCEECCCCCEEEECHHHHH
RLLKIATDRGLTPQPAALGAFESDASHAKASGLTARAGLLCLPTLSTHGYEVVARSAIDD
HHHHHHHCCCCCCCCHHCCCCCCCCCHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
MAAIVVDFVLQPGRPNG
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AHRDRDSTDELLQELLWTYGPCGQEDAVRAVIARELEPVVDDLWTDDAGNLIGYVAADA
CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
SRGDAGAPDHRHRTAAIPGTATRVMAHMDELSMIVKRVEPDGTLHLTQLGTMYPGNFGLG
CCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC
PVAVLGDNETLTAVLTLGSEHTTKESSRIWETKPDQGDRSLDWHHVYVFTGRSTDELAAA
CEEEECCCCEEEEEEEECCCCCCCHHCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHH
GVHAGTRVCVDRSKRSVVEIGDYVGAYFLDDRAAVTALLNAARMLRERGQRPADDVYLVF
CCCCCCCEECCCCCCHHHHHHHHHCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
TANEEIGGVGGAYASATLPGDLTLALEVGPTEREYTTSVAGGPIVGYSDALCVYDKSVAD
ECCCCCCCCCCCHHCCCCCCCEEEEEEECCCCCHHHHCCCCCCEECCCCCEEEECHHHHH
RLLKIATDRGLTPQPAALGAFESDASHAKASGLTARAGLLCLPTLSTHGYEVVARSAIDD
HHHHHHHCCCCCCCCHHCCCCCCCCCHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
MAAIVVDFVLQPGRPNG
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]