| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407025
Identifier: 41407025
GI number: 41407025
Start: 958307
End: 959428
Strand: Direct
Name: 41407025
Synonym: MAP0927
Alternate gene names: NA
Gene position: 958307-959428 (Clockwise)
Preceding gene: 41407024
Following gene: 41407026
Centisome position: 19.84
GC content: 70.77
Gene sequence:
>1122_bases CTGGTCATCACGACCCGGCCGCGTTGGCCACCGATGGGCTTCGCGGGGGATGGGAACCGAAGAGAGCAGGTCATCATGCC AAGCATCCCGCAGTCGTTGTTGTGGATATCGCTCGTGGTGCTGTGGCTGTTCGTCTTGGTGCCGATGCTGGTCAGCAAAC GCGACGCGGTGCGCCGCACCAGCGATGTGGCGCTGGCGACCCGAGTCCTCAACGGCGGGGCCAACTCTCGGCTGGTCAAG CGCGGCGGGCCGGCCGCCGGGCACCGCAGCGATCCCCACTGGACGCGACCGGAAGACTCCGACGCCGACCTCGACGAGGA GCACGACGTCGCCGCGGACGAGCCCGGTGACCAGGATGACGACGCCGACACCGACGAGCTGAGCCGCCGGCGGCCGGTGG TGATGAGGATGGCCACCGCCGAACCCGCCGAGCCCGACTATCTGGACGTCGACGTGGTCGAGGATTCCGCCGCACTTCCG GTGGGCGCCCGCGGTTCCGCGGCCGAGAACAACGACGAGCAGCCGGCCGAGGACGACGACGTCGACACCGAGGCGGTCGC CAAGGGCGGCGACGAGCAGGACAGCTACGAGTACGTCGACGACTCGTCCGGCCTGGAGGAGCCTGCCGCCGAGGGCGACG AGGCCGACGAGGAGGCGCCGGCGCCGATGCCGCGCAACGCCTCGCGGCGGCGCCGGTTCGACACCAAGACCGCCATCGCC ATCAGCGCCCGCAAATACGCCTTCCGCAAGCGGGTGCTGATGGCGATGGCGGTCGTGTTGGTCGGCTCGGCCACCGCGGC GTTCAAGATCTCGCCGACGGCGTGGTGGGTCTGCGGCGCCGCGACCACCGTGACCCTGCTCTACCTGGGCTATCTGCGCC GCCAGACGCGCATCGAGGAGAAGGTGCGCCGGCGCCGCATGCAGCGGATGGCGCGGGCGCGGCTCGGCGTCGAGAACGCC TATGCCCGTGAGTACGACGTGGTGCCGTCGCGGCTGCGGCGCCCGGGCGCGGTGGTGCTCGAGATCGACGACGAGGACCC GATCTTCGAGCACCTGGAGTACGCGATGCCGATGCGGACGTTCGGTTGGCCCAGGGACTTGCCGCGCGCCGTCGGCGAAT AG
Upstream 100 bases:
>100_bases CGACGCGCCGGCGGCGGCCGAAACGTTGCCCATCTGGGACTAGCGCGACACGAGTGACTAGTGGTGCTTGTGAGAGGCAA ATTACAGGTGTGTAATTGTC
Downstream 100 bases:
>100_bases TGCTCGCGGTTTCGGCAGTTGCTGCCGCGGCTGGTAGCCTGCTTAGCGATCAGGGGCTATGGCGCAGTTGGTAGCGCGAC TCGTTCGCATCGAGTAGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MVITTRPRWPPMGFAGDGNRREQVIMPSIPQSLLWISLVVLWLFVLVPMLVSKRDAVRRTSDVALATRVLNGGANSRLVK RGGPAAGHRSDPHWTRPEDSDADLDEEHDVAADEPGDQDDDADTDELSRRRPVVMRMATAEPAEPDYLDVDVVEDSAALP VGARGSAAENNDEQPAEDDDVDTEAVAKGGDEQDSYEYVDDSSGLEEPAAEGDEADEEAPAPMPRNASRRRRFDTKTAIA ISARKYAFRKRVLMAMAVVLVGSATAAFKISPTAWWVCGAATTVTLLYLGYLRRQTRIEEKVRRRRMQRMARARLGVENA YAREYDVVPSRLRRPGAVVLEIDDEDPIFEHLEYAMPMRTFGWPRDLPRAVGE
Sequences:
>Translated_373_residues MVITTRPRWPPMGFAGDGNRREQVIMPSIPQSLLWISLVVLWLFVLVPMLVSKRDAVRRTSDVALATRVLNGGANSRLVK RGGPAAGHRSDPHWTRPEDSDADLDEEHDVAADEPGDQDDDADTDELSRRRPVVMRMATAEPAEPDYLDVDVVEDSAALP VGARGSAAENNDEQPAEDDDVDTEAVAKGGDEQDSYEYVDDSSGLEEPAAEGDEADEEAPAPMPRNASRRRRFDTKTAIA ISARKYAFRKRVLMAMAVVLVGSATAAFKISPTAWWVCGAATTVTLLYLGYLRRQTRIEEKVRRRRMQRMARARLGVENA YAREYDVVPSRLRRPGAVVLEIDDEDPIFEHLEYAMPMRTFGWPRDLPRAVGE >Mature_373_residues MVITTRPRWPPMGFAGDGNRREQVIMPSIPQSLLWISLVVLWLFVLVPMLVSKRDAVRRTSDVALATRVLNGGANSRLVK RGGPAAGHRSDPHWTRPEDSDADLDEEHDVAADEPGDQDDDADTDELSRRRPVVMRMATAEPAEPDYLDVDVVEDSAALP VGARGSAAENNDEQPAEDDDVDTEAVAKGGDEQDSYEYVDDSSGLEEPAAEGDEADEEAPAPMPRNASRRRRFDTKTAIA ISARKYAFRKRVLMAMAVVLVGSATAAFKISPTAWWVCGAATTVTLLYLGYLRRQTRIEEKVRRRRMQRMARARLGVENA YAREYDVVPSRLRRPGAVVLEIDDEDPIFEHLEYAMPMRTFGWPRDLPRAVGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41529; Mature: 41529
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVITTRPRWPPMGFAGDGNRREQVIMPSIPQSLLWISLVVLWLFVLVPMLVSKRDAVRRT CEECCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDVALATRVLNGGANSRLVKRGGPAAGHRSDPHWTRPEDSDADLDEEHDVAADEPGDQDD HHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DADTDELSRRRPVVMRMATAEPAEPDYLDVDVVEDSAALPVGARGSAAENNDEQPAEDDD CCCHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC VDTEAVAKGGDEQDSYEYVDDSSGLEEPAAEGDEADEEAPAPMPRNASRRRRFDTKTAIA CCHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHEE ISARKYAFRKRVLMAMAVVLVGSATAAFKISPTAWWVCGAATTVTLLYLGYLRRQTRIEE HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHH KVRRRRMQRMARARLGVENAYAREYDVVPSRLRRPGAVVLEIDDEDPIFEHLEYAMPMRT HHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHCCCCEEEEEECCCCHHHHHHHHHCCHHH FGWPRDLPRAVGE CCCCHHHHHHHCC >Mature Secondary Structure MVITTRPRWPPMGFAGDGNRREQVIMPSIPQSLLWISLVVLWLFVLVPMLVSKRDAVRRT CEECCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDVALATRVLNGGANSRLVKRGGPAAGHRSDPHWTRPEDSDADLDEEHDVAADEPGDQDD HHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DADTDELSRRRPVVMRMATAEPAEPDYLDVDVVEDSAALPVGARGSAAENNDEQPAEDDD CCCHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC VDTEAVAKGGDEQDSYEYVDDSSGLEEPAAEGDEADEEAPAPMPRNASRRRRFDTKTAIA CCHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHEE ISARKYAFRKRVLMAMAVVLVGSATAAFKISPTAWWVCGAATTVTLLYLGYLRRQTRIEE HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHH KVRRRRMQRMARARLGVENAYAREYDVVPSRLRRPGAVVLEIDDEDPIFEHLEYAMPMRT HHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHCCCCEEEEEECCCCHHHHHHHHHCCHHH FGWPRDLPRAVGE CCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA