| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406882
Identifier: 41406882
GI number: 41406882
Start: 805039
End: 805482
Strand: Direct
Name: 41406882
Synonym: MAP0784
Alternate gene names: NA
Gene position: 805039-805482 (Clockwise)
Preceding gene: 41406880
Following gene: 41406883
Centisome position: 16.67
GC content: 65.09
Gene sequence:
>444_bases ATGGCACTGAAAGAATCCCGCGACATCGTCATCGAAGCCAGTCCGGAGGAGATTCTGGACGTCATCGCCGATTTCGAATC GATGCCGCAATGGTCGGAGCCGCACCAGAGCGCCGAGGTCCTGGCGACCGGCCACGACGGGCGGCCCAGCCAGGTCAGGA TGAAGGTCAAGGTCGCCGGGATCACCGACGAGCAGGTCGTCGCCTATACGTGGGCGGACAACGTGGTGAGCTGGACGCTG GTCAGCTCGTCGCAGCAGAAGGCGCAGGACGGGAAGTACACCCTGGTGCCGCAGGGCGACGCGACGCTGGTCAAGTTCGA GCTTGTCGCGGACCCGAACGTGCCGCTGCCGGGGTTCGTGCTCAAGCGCGCCGTGAAGGGCACCATCGATTCCGCGACCA AGGCGCTGCGTCAGCGGGTGCTCGAGGTGAAGAAGGGGAAGTAG
Upstream 100 bases:
>100_bases ACGGTGTATGCGGGTTCGGTCGCAGCATCAGTCACAGGCACGACGGTACGCTCGGTCGAATCCCGTCCGGGCGCGACGCC GTCCCAGTATCGTGCGAGCC
Downstream 100 bases:
>100_bases ACGCGGTGAGCAGCGGAGGGCCGCTGGCCGGGGTGAGGGTCATCGAATTGGGCGGCATCGGCCCGGGGCCACATGCGGGG ATGGTGCTCGCCGATCTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Polyketide Cyclase/Dehydrase; Cyclase; Cyclase/Dehydrase Family Protein; Polyketide Cyclase / Dehydrase Family Protein
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MALKESRDIVIEASPEEILDVIADFESMPQWSEPHQSAEVLATGHDGRPSQVRMKVKVAGITDEQVVAYTWADNVVSWTL VSSSQQKAQDGKYTLVPQGDATLVKFELVADPNVPLPGFVLKRAVKGTIDSATKALRQRVLEVKKGK
Sequences:
>Translated_147_residues MALKESRDIVIEASPEEILDVIADFESMPQWSEPHQSAEVLATGHDGRPSQVRMKVKVAGITDEQVVAYTWADNVVSWTL VSSSQQKAQDGKYTLVPQGDATLVKFELVADPNVPLPGFVLKRAVKGTIDSATKALRQRVLEVKKGK >Mature_146_residues ALKESRDIVIEASPEEILDVIADFESMPQWSEPHQSAEVLATGHDGRPSQVRMKVKVAGITDEQVVAYTWADNVVSWTLV SSSQQKAQDGKYTLVPQGDATLVKFELVADPNVPLPGFVLKRAVKGTIDSATKALRQRVLEVKKGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16114; Mature: 15982
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKESRDIVIEASPEEILDVIADFESMPQWSEPHQSAEVLATGHDGRPSQVRMKVKVAG CCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEC ITDEQVVAYTWADNVVSWTLVSSSQQKAQDGKYTLVPQGDATLVKFELVADPNVPLPGFV CCCCCEEEEEECCCCEEEEEECCCHHHHCCCCEEEEECCCCEEEEEEEEECCCCCCCHHH LKRAVKGTIDSATKALRQRVLEVKKGK HHHHHHCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ALKESRDIVIEASPEEILDVIADFESMPQWSEPHQSAEVLATGHDGRPSQVRMKVKVAG CCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEC ITDEQVVAYTWADNVVSWTLVSSSQQKAQDGKYTLVPQGDATLVKFELVADPNVPLPGFV CCCCCEEEEEECCCCEEEEEECCCHHHHCCCCEEEEECCCCEEEEEEEEECCCCCCCHHH LKRAVKGTIDSATKALRQRVLEVKKGK HHHHHHCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA