| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406869
Identifier: 41406869
GI number: 41406869
Start: 793494
End: 794174
Strand: Direct
Name: 41406869
Synonym: MAP0771
Alternate gene names: NA
Gene position: 793494-794174 (Clockwise)
Preceding gene: 41406867
Following gene: 41406870
Centisome position: 16.43
GC content: 64.46
Gene sequence:
>681_bases TTGGTCCTGTGGATCGCCTCGTTTTTCCTCTTTCCGGGCTTCAATCCGCCGATGTCACCGTCGCTGCCGGCCGACCAGGT TGCCGCGTTCTACCGCGATCCGGCCCACCTGCCCGAAATCCGGTACAGCATGATCCTTTTCAACTGGTTCGGCGTGTGCC TTGTCCCGATCCTGACGCTGATCGTGCTGCAGATCCGTCGCATGGCGCATCGGACGCCGATCTTCTCCTACGCCATGCTC GGCTGCGCGGCCGGCGGCCCGACCCTGTTCCTGGTCGCCAACGTCTGCTGGTTGCTGGCTGCGTTCCGGCCGGAACGCAG CCCCGAACTGACCCAGCTGCTCAACGACTTCGGCTGGATCACCTTCACCATCGTGGTGCCGTTCTTGATCGGGCAAAGCG TAATCCTAGCTCTGGCAATCTATTTCGATGGCCAGCCGCGTCCGGTGTTCCCACGTTGGGTGGCCCACTTCAACCTGCTG GTGGCCGCCGCGCTGGTGCCCGCGGCCTTCGTCGGGGTGTCGCTGACCGGCCCGCTGGCGTGGGACGGCTTGCTGTCGTT CTGGGTGAAGAACGTCGCCATCGCGGTGTGGATCGTCGTGATGGGCGTCGTTTTGGGGCGGGCGATCTACCGGGAGCGCG CCGAGAACACCGGCCGTGCAGGTGAATTGGTGAGCGCATGA
Upstream 100 bases:
>100_bases TCGGGAGGGAGTACCGATGTCCGACGTCGACGGTGGCCACGCGCGGGGGCCGCGCCGGGTCGACGGCGAGCTGATCCTGT TCTGGACACTGCCGGTTGCC
Downstream 100 bases:
>100_bases GCGCCGTGCTGACTCCGGCAACGTCCACAGGCCCGCTGCATCAGCGGATCTTCTGGCAGCTGAGGCATGGCCCCAAACGG GAGCTGTGGCTGGCGTGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MVLWIASFFLFPGFNPPMSPSLPADQVAAFYRDPAHLPEIRYSMILFNWFGVCLVPILTLIVLQIRRMAHRTPIFSYAML GCAAGGPTLFLVANVCWLLAAFRPERSPELTQLLNDFGWITFTIVVPFLIGQSVILALAIYFDGQPRPVFPRWVAHFNLL VAAALVPAAFVGVSLTGPLAWDGLLSFWVKNVAIAVWIVVMGVVLGRAIYRERAENTGRAGELVSA
Sequences:
>Translated_226_residues MVLWIASFFLFPGFNPPMSPSLPADQVAAFYRDPAHLPEIRYSMILFNWFGVCLVPILTLIVLQIRRMAHRTPIFSYAML GCAAGGPTLFLVANVCWLLAAFRPERSPELTQLLNDFGWITFTIVVPFLIGQSVILALAIYFDGQPRPVFPRWVAHFNLL VAAALVPAAFVGVSLTGPLAWDGLLSFWVKNVAIAVWIVVMGVVLGRAIYRERAENTGRAGELVSA >Mature_226_residues MVLWIASFFLFPGFNPPMSPSLPADQVAAFYRDPAHLPEIRYSMILFNWFGVCLVPILTLIVLQIRRMAHRTPIFSYAML GCAAGGPTLFLVANVCWLLAAFRPERSPELTQLLNDFGWITFTIVVPFLIGQSVILALAIYFDGQPRPVFPRWVAHFNLL VAAALVPAAFVGVSLTGPLAWDGLLSFWVKNVAIAVWIVVMGVVLGRAIYRERAENTGRAGELVSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24990; Mature: 24990
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLWIASFFLFPGFNPPMSPSLPADQVAAFYRDPAHLPEIRYSMILFNWFGVCLVPILTL CHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IVLQIRRMAHRTPIFSYAMLGCAAGGPTLFLVANVCWLLAAFRPERSPELTQLLNDFGWI HHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH TFTIVVPFLIGQSVILALAIYFDGQPRPVFPRWVAHFNLLVAAALVPAAFVGVSLTGPLA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH WDGLLSFWVKNVAIAVWIVVMGVVLGRAIYRERAENTGRAGELVSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MVLWIASFFLFPGFNPPMSPSLPADQVAAFYRDPAHLPEIRYSMILFNWFGVCLVPILTL CHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IVLQIRRMAHRTPIFSYAMLGCAAGGPTLFLVANVCWLLAAFRPERSPELTQLLNDFGWI HHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH TFTIVVPFLIGQSVILALAIYFDGQPRPVFPRWVAHFNLLVAAALVPAAFVGVSLTGPLA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH WDGLLSFWVKNVAIAVWIVVMGVVLGRAIYRERAENTGRAGELVSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA