| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406863
Identifier: 41406863
GI number: 41406863
Start: 788296
End: 790026
Strand: Direct
Name: 41406863
Synonym: MAP0765
Alternate gene names: NA
Gene position: 788296-790026 (Clockwise)
Preceding gene: 41406862
Following gene: 41406867
Centisome position: 16.32
GC content: 66.38
Gene sequence:
>1731_bases ATGCTGACGCGCTTCGTCCGGATCCAGCTGGCGATCTTCCTGATCGCCGGGACCATCGGCGTGATCTCGATGGTGCTCTT CTACATTCAGGCGCCGACCCTGCTGGGCATCGGCCGGATGACGGTGACGCTGGAGTTGCCGGCCACCGGCGGCCTGTACC GGTTTTCCAACGTGACCTACCGCGGGGTTCAGCTCGGTAAGGTCACCGCGGTGGGGCTGACCCCGAGCGGTGTGAAAGCG ACTCTGTCGCTTAGCACTTCACCGAAGGTCCCCGCGGACCTGACCGCGGAGGTGCTCAGCGTGTCCGCGGTGGGTGAGCA GTACGTGGACTTGCGGCCGAGGACCAATTCACCGCCCTACCTGCACGACGGATCGGTGATCGCCATGCGCGACACCAAGA TTCCGCAGCCGGTCGGGCCAATGCTGGATCAGGTCAATGCCCTGGTCCAGAGCATCCCGAAGACCAAACTCGGCCAATTG CTCGACGAGTCGTTCCAGGGCTTCAATGGTTCCGGTTACGACCTTGGATCGCTGATCGACTCCTCGCAGACGTTGTCCCG CGACGCCAACGGCGTCGTCGATCGCACCCGCGCCCTCACCGAAGACACCGGGCCGTTGCTGGATACCCAGGCACAAACCA CCGATTCGATCAGAACCTGGGCGCGTAGCTTCGCCGGCATCTCGGATGTGATGGTGAACAACGATTCCCACTTCCGCACC ATCCTGGAAAAGGGTCCCGAGACCGCGAACGAGGCGTCGCGACTGCTCGATCAGATCAAGCCGACGCTGCCGGTGCTGCT CGCCAACCTGACCACCATCGGTCAGATCGGCATCACCTACCATCCTTCGCTCGAGCAACTGCTGGTGTTGCTGCCGTCCG CGGTTGCCATCGAGCAGGCTGCCGCGGCCCCGAACCATCCCGAGGGCACCGCCCAGGGTGACTTCGCGCTGACGATCGAC GACCCGCCGATCTGCACCGTCGGCTTCATGCCTCCCAACACCTGGCGATCCCCGGACGACCTCAGTGACATCGACACGCC GGACGGGTTGTATTGCAAACTCCCGCAGGATTCGCCGCTCTCGGTCCGCGGTGCCCGCAACTATCCCTGCATGGGGCACC CGGGCAAGCGGGCGCCCACCGTCGAAATCTGCAACAGCGACCAGCCTTTCATGCCGCTGGCGATGAAACAGCATGTCCTG GGTCCCTACCCACTGGATCCGAATCTGCTTGCCCAGGGCGTCCCGCCCGATGACCGGGTCACCGTCAACGACAGGATCTT CGGACCCGTCGAGGGGACGCCGCTGCCGCCGGGGGCCGTGCCGCGCGGTGCGCCGGCTGGGCCTCGAGGGGAGAATCCCC CACCGGGTTCGGTGGGGGCGGCCGTGCCGCCGGTGCCGTCGTCGGGACCACCGGCGCTGGCGCCCATGTCGAGAATGTCG GCCGACCTGCCGCCCATAGCGCCGCTCGACGTCCCGACGCCGACGGAACTTCCCCCGCCGCCACCGCCACCACCGGCGCC CGCGGCACCGGATCAGGTCGACGGCGCAGCGCCCCAGGCCGCGCCAAGCGCGTTCGCAGGCAAGGCATCCAAGCCCGCGC CGTCGGTCGTGGTGGCCAAATACGATCCGCGCACCGGTCGTTACGTCGGGCCGGACGGAAAGCTGTATCAGCAGTCGGAT TTGGTGACGCCGAAAGCGCCCAAGACATGGAAGGACATGCTGCCCACGTAA
Upstream 100 bases:
>100_bases ACCGCTGCCCGGACCTCCGCCCGGCGCGGCATCGCTGCCCGACGCGGGTCTCGGCCAAACACCGCCTGCGGCAACGGCAC CGACGGAAGGTGGCGGATAG
Downstream 100 bases:
>100_bases CACCGCGCAGCGGTCAAGGCGCCACGCACCAAAAGCAGTGCAGGGTAAGCGTATTGGGGCCGCGGTGCTCGCTCAGCTCA GCTTGTCCAGGCGCAGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family F; MCE Family Protein; Mce Family F; MCE-Family Protein; Mce-Family F; Mce Related Protein; Mce-Related Protein; MCE-Family; Mce Family
Number of amino acids: Translated: 576; Mature: 576
Protein sequence:
>576_residues MLTRFVRIQLAIFLIAGTIGVISMVLFYIQAPTLLGIGRMTVTLELPATGGLYRFSNVTYRGVQLGKVTAVGLTPSGVKA TLSLSTSPKVPADLTAEVLSVSAVGEQYVDLRPRTNSPPYLHDGSVIAMRDTKIPQPVGPMLDQVNALVQSIPKTKLGQL LDESFQGFNGSGYDLGSLIDSSQTLSRDANGVVDRTRALTEDTGPLLDTQAQTTDSIRTWARSFAGISDVMVNNDSHFRT ILEKGPETANEASRLLDQIKPTLPVLLANLTTIGQIGITYHPSLEQLLVLLPSAVAIEQAAAAPNHPEGTAQGDFALTID DPPICTVGFMPPNTWRSPDDLSDIDTPDGLYCKLPQDSPLSVRGARNYPCMGHPGKRAPTVEICNSDQPFMPLAMKQHVL GPYPLDPNLLAQGVPPDDRVTVNDRIFGPVEGTPLPPGAVPRGAPAGPRGENPPPGSVGAAVPPVPSSGPPALAPMSRMS ADLPPIAPLDVPTPTELPPPPPPPPAPAAPDQVDGAAPQAAPSAFAGKASKPAPSVVVAKYDPRTGRYVGPDGKLYQQSD LVTPKAPKTWKDMLPT
Sequences:
>Translated_576_residues MLTRFVRIQLAIFLIAGTIGVISMVLFYIQAPTLLGIGRMTVTLELPATGGLYRFSNVTYRGVQLGKVTAVGLTPSGVKA TLSLSTSPKVPADLTAEVLSVSAVGEQYVDLRPRTNSPPYLHDGSVIAMRDTKIPQPVGPMLDQVNALVQSIPKTKLGQL LDESFQGFNGSGYDLGSLIDSSQTLSRDANGVVDRTRALTEDTGPLLDTQAQTTDSIRTWARSFAGISDVMVNNDSHFRT ILEKGPETANEASRLLDQIKPTLPVLLANLTTIGQIGITYHPSLEQLLVLLPSAVAIEQAAAAPNHPEGTAQGDFALTID DPPICTVGFMPPNTWRSPDDLSDIDTPDGLYCKLPQDSPLSVRGARNYPCMGHPGKRAPTVEICNSDQPFMPLAMKQHVL GPYPLDPNLLAQGVPPDDRVTVNDRIFGPVEGTPLPPGAVPRGAPAGPRGENPPPGSVGAAVPPVPSSGPPALAPMSRMS ADLPPIAPLDVPTPTELPPPPPPPPAPAAPDQVDGAAPQAAPSAFAGKASKPAPSVVVAKYDPRTGRYVGPDGKLYQQSD LVTPKAPKTWKDMLPT >Mature_576_residues MLTRFVRIQLAIFLIAGTIGVISMVLFYIQAPTLLGIGRMTVTLELPATGGLYRFSNVTYRGVQLGKVTAVGLTPSGVKA TLSLSTSPKVPADLTAEVLSVSAVGEQYVDLRPRTNSPPYLHDGSVIAMRDTKIPQPVGPMLDQVNALVQSIPKTKLGQL LDESFQGFNGSGYDLGSLIDSSQTLSRDANGVVDRTRALTEDTGPLLDTQAQTTDSIRTWARSFAGISDVMVNNDSHFRT ILEKGPETANEASRLLDQIKPTLPVLLANLTTIGQIGITYHPSLEQLLVLLPSAVAIEQAAAAPNHPEGTAQGDFALTID DPPICTVGFMPPNTWRSPDDLSDIDTPDGLYCKLPQDSPLSVRGARNYPCMGHPGKRAPTVEICNSDQPFMPLAMKQHVL GPYPLDPNLLAQGVPPDDRVTVNDRIFGPVEGTPLPPGAVPRGAPAGPRGENPPPGSVGAAVPPVPSSGPPALAPMSRMS ADLPPIAPLDVPTPTELPPPPPPPPAPAAPDQVDGAAPQAAPSAFAGKASKPAPSVVVAKYDPRTGRYVGPDGKLYQQSD LVTPKAPKTWKDMLPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60694; Mature: 60694
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRFVRIQLAIFLIAGTIGVISMVLFYIQAPTLLGIGRMTVTLELPATGGLYRFSNVTY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCEEEEEEECCCCCCEEEECCCEE RGVQLGKVTAVGLTPSGVKATLSLSTSPKVPADLTAEVLSVSAVGEQYVDLRPRTNSPPY CCEEECEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCE LHDGSVIAMRDTKIPQPVGPMLDQVNALVQSIPKTKLGQLLDESFQGFNGSGYDLGSLID EECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHC SSQTLSRDANGVVDRTRALTEDTGPLLDTQAQTTDSIRTWARSFAGISDVMVNNDSHFRT CHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHEEECCCHHHHH ILEKGPETANEASRLLDQIKPTLPVLLANLTTIGQIGITYHPSLEQLLVLLPSAVAIEQA HHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHCCHHHHHHH AAAPNHPEGTAQGDFALTIDDPPICTVGFMPPNTWRSPDDLSDIDTPDGLYCKLPQDSPL HCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC SVRGARNYPCMGHPGKRAPTVEICNSDQPFMPLAMKQHVLGPYPLDPNLLAQGVPPDDRV EECCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCCCCCHHHHCCCCCCCCCE TVNDRIFGPVEGTPLPPGAVPRGAPAGPRGENPPPGSVGAAVPPVPSSGPPALAPMSRMS EECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC ADLPPIAPLDVPTPTELPPPPPPPPAPAAPDQVDGAAPQAAPSAFAGKASKPAPSVVVAK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEE YDPRTGRYVGPDGKLYQQSDLVTPKAPKTWKDMLPT ECCCCCCEECCCCCEEECCCCCCCCCCCHHHHCCCC >Mature Secondary Structure MLTRFVRIQLAIFLIAGTIGVISMVLFYIQAPTLLGIGRMTVTLELPATGGLYRFSNVTY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCEEEEEEECCCCCCEEEECCCEE RGVQLGKVTAVGLTPSGVKATLSLSTSPKVPADLTAEVLSVSAVGEQYVDLRPRTNSPPY CCEEECEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCE LHDGSVIAMRDTKIPQPVGPMLDQVNALVQSIPKTKLGQLLDESFQGFNGSGYDLGSLID EECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHC SSQTLSRDANGVVDRTRALTEDTGPLLDTQAQTTDSIRTWARSFAGISDVMVNNDSHFRT CHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHEEECCCHHHHH ILEKGPETANEASRLLDQIKPTLPVLLANLTTIGQIGITYHPSLEQLLVLLPSAVAIEQA HHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHCCHHHHHHH AAAPNHPEGTAQGDFALTIDDPPICTVGFMPPNTWRSPDDLSDIDTPDGLYCKLPQDSPL HCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC SVRGARNYPCMGHPGKRAPTVEICNSDQPFMPLAMKQHVLGPYPLDPNLLAQGVPPDDRV EECCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCCCCCHHHHCCCCCCCCCE TVNDRIFGPVEGTPLPPGAVPRGAPAGPRGENPPPGSVGAAVPPVPSSGPPALAPMSRMS EECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC ADLPPIAPLDVPTPTELPPPPPPPPAPAAPDQVDGAAPQAAPSAFAGKASKPAPSVVVAK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEE YDPRTGRYVGPDGKLYQQSDLVTPKAPKTWKDMLPT ECCCCCCEECCCCCEEECCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA