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The map label for this gene is tal [H]

Identifier: 39998068

GI number: 39998068

Start: 3269687

End: 3270331

Strand: Reverse

Name: tal [H]

Synonym: GSU2977

Alternate gene names: 39998068

Gene position: 3270331-3269687 (Counterclockwise)

Preceding gene: 39998069

Following gene: 39998066

Centisome position: 85.74

GC content: 60.78

Gene sequence:

>645_bases
ATGAAATTTTTCATCGACACCGCTGACGTTAAGGAAATCCGCCAAGCCCACGACCTGGGACTCGTGGACGGGGTTACCAC
CAATCCGTCGCTTATCGCCAAGTCCGGCCGCAAGTTTGAGGACGTCATCAAGGAGATCACCGAGATCGTCGACGGTCCCA
TCTCCGCGGAAGTGGTTTCTCTGGAGGCTGCCGGCATGATCAGGGAGGCCGGGGAGCTGGCCAAGATCCACAAGAACATC
GTCATCAAGCTCCCCATGACCCCCGAGGGGCTCAAGGCGTGTGCCGCCCTTACCCGTGAGGGGATCAAGACCAACGTCAC
CCTGATCTTCACCCCCATGCAGGCCCTGCTTGCCGCCAAGGCCGGCGCTACCTACGTCTCCCCCTTCGTGGGACGCCTGG
ACGATATCTCCCAGGACGGCATGGGGATCATCGACGACATCAAGACCATCTTCGACAACTACGGCTACCAGTCCGAGATC
ATCGTGGCCAGCGTCCGCAACCCCGTTCATGTCCTGAACGCGGCCCTCATCGGTGCGGACATCGCCACCATCCCCTACTC
GGTCATGCTCCAGCTGGCCAAGCACCCCCTCACCGACTCCGGCATCGAGCGGTTCCTGAAGGACTGGGAAAGCGTGCCCA
AGTAA

Upstream 100 bases:

>100_bases
CACTTCTGCTCCATGGAGTGTCTGGAAAAGTACCGGCAGCAGCTCGAAAGCAAGTAATTGTCGCCATGGCGCCATCAATA
ATCAACCGGAGGTTTGCAGC

Downstream 100 bases:

>100_bases
GGGGAGAAGTGCAGTGCACCATGCAAAAAAGCCCCGGCGATGCTGTCCATTGCCGGGGCTTTTCATTCACTGGCGCCGAT
GCGCTTACTTCTTTCGCCGG

Product: translaldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MKFFIDTADVKEIRQAHDLGLVDGVTTNPSLIAKSGRKFEDVIKEITEIVDGPISAEVVSLEAAGMIREAGELAKIHKNI
VIKLPMTPEGLKACAALTREGIKTNVTLIFTPMQALLAAKAGATYVSPFVGRLDDISQDGMGIIDDIKTIFDNYGYQSEI
IVASVRNPVHVLNAALIGADIATIPYSVMLQLAKHPLTDSGIERFLKDWESVPK

Sequences:

>Translated_214_residues
MKFFIDTADVKEIRQAHDLGLVDGVTTNPSLIAKSGRKFEDVIKEITEIVDGPISAEVVSLEAAGMIREAGELAKIHKNI
VIKLPMTPEGLKACAALTREGIKTNVTLIFTPMQALLAAKAGATYVSPFVGRLDDISQDGMGIIDDIKTIFDNYGYQSEI
IVASVRNPVHVLNAALIGADIATIPYSVMLQLAKHPLTDSGIERFLKDWESVPK
>Mature_214_residues
MKFFIDTADVKEIRQAHDLGLVDGVTTNPSLIAKSGRKFEDVIKEITEIVDGPISAEVVSLEAAGMIREAGELAKIHKNI
VIKLPMTPEGLKACAALTREGIKTNVTLIFTPMQALLAAKAGATYVSPFVGRLDDISQDGMGIIDDIKTIFDNYGYQSEI
IVASVRNPVHVLNAALIGADIATIPYSVMLQLAKHPLTDSGIERFLKDWESVPK

Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]

COG id: COG0176

COG function: function code G; Transaldolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transaldolase family. Type 3B subfamily [H]

Homologues:

Organism=Homo sapiens, GI5803187, Length=223, Percent_Identity=30.0448430493274, Blast_Score=72, Evalue=5e-13,
Organism=Escherichia coli, GI87081788, Length=212, Percent_Identity=33.4905660377358, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1790382, Length=213, Percent_Identity=35.6807511737089, Blast_Score=127, Evalue=4e-31,
Organism=Escherichia coli, GI1788807, Length=242, Percent_Identity=29.7520661157025, Blast_Score=80, Evalue=9e-17,
Organism=Escherichia coli, GI1786189, Length=185, Percent_Identity=32.972972972973, Blast_Score=79, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI25153750, Length=174, Percent_Identity=32.7586206896552, Blast_Score=77, Evalue=8e-15,
Organism=Saccharomyces cerevisiae, GI6321480, Length=171, Percent_Identity=30.4093567251462, Blast_Score=76, Evalue=4e-15,
Organism=Drosophila melanogaster, GI45549185, Length=172, Percent_Identity=31.3953488372093, Blast_Score=75, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001585
- InterPro:   IPR004731
- InterPro:   IPR022999
- InterPro:   IPR018225 [H]

Pfam domain/function: PF00923 Transaldolase [H]

EC number: =2.2.1.2 [H]

Molecular weight: Translated: 23173; Mature: 23173

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS01054 TRANSALDOLASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFFIDTADVKEIRQAHDLGLVDGVTTNPSLIAKSGRKFEDVIKEITEIVDGPISAEVVS
CEEEECCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHH
LEAAGMIREAGELAKIHKNIVIKLPMTPEGLKACAALTREGIKTNVTLIFTPMQALLAAK
HHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHH
AGATYVSPFVGRLDDISQDGMGIIDDIKTIFDNYGYQSEIIVASVRNPVHVLNAALIGAD
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCH
IATIPYSVMLQLAKHPLTDSGIERFLKDWESVPK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKFFIDTADVKEIRQAHDLGLVDGVTTNPSLIAKSGRKFEDVIKEITEIVDGPISAEVVS
CEEEECCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHH
LEAAGMIREAGELAKIHKNIVIKLPMTPEGLKACAALTREGIKTNVTLIFTPMQALLAAK
HHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHH
AGATYVSPFVGRLDDISQDGMGIIDDIKTIFDNYGYQSEIIVASVRNPVHVLNAALIGAD
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCH
IATIPYSVMLQLAKHPLTDSGIERFLKDWESVPK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA