| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997994
Identifier: 39997994
GI number: 39997994
Start: 3196158
End: 3196931
Strand: Reverse
Name: 39997994
Synonym: GSU2903
Alternate gene names: NA
Gene position: 3196931-3196158 (Counterclockwise)
Preceding gene: 39997995
Following gene: 39997993
Centisome position: 83.82
GC content: 62.79
Gene sequence:
>774_bases ATGTCCCGCTTCCTCCCACTCACCCGCTATCTGTCCGACAGGTGCGGGGTCGACTTCGTGGCGGTGCCGGTGGATACCCA CGATTTCGAGAAACGGTTCAAGTCCGGCGAGTTCACCTTTACCCACACCAACTCCCTGATCTACGTCATCCTGCGGGAGA ACCACGGCGTCGAGCTGGTGGCATCGGAAAAGCGCGGCACCTTCGGCTCCCGTTCCGCGGGCGCCCTCATCGCCCGCAAG GGGAGCGGCATCGAAACACTCGACCACATCCGGGGGAAGAGGCTGGCCTTCGGCCCCATGCTGGCTCCCACCGGCTACCT GGCCGAGTACGACCTGATGCTCTCGGCCGGCATCAACCCGGAGCACGACCTGGGGACCTATTCCATCCCCTCGGGCTCCT TCAAGCACGAAAAACTCATCTACGGCGTCCTGCACGGCAAGTATGACGTGGCCGCCGCGCCGGTCCTCGACCTGGAAACC ATGGCACAGGAAGGAAAGATCTCGGCGGACGACTTCGTCATCCTCGCCCAGAGCAAGCCGATCCCCTACTGCACCTTTGC CGTGGCCAAGGGAACCGATCCGGCCCTGGTGAAGAAGGTGAAGGACGCCCTCCTGGCCCTGAAGCCCGGCGACACCGCCG AGGTGGACGGGGAGCGGCTCAAGGTGCTGAAGGCCGCCTGGATCGACGGCTATGAAGATCTGCTGGACAGCGATTACGAC CTTATCCGTGAAATGGCGAAGCGTGTCAATATGCCGCCATATCAGACGTACTGA
Upstream 100 bases:
>100_bases GCTGGCCCTCTTTGCCGCCTTCCTTGCCGGCTGCAAGCCCGAGGGGGCCCGGCCCGTGGTGAAGATCGGCTACATGCTCT GCAACAACGAGCAGGAGACC
Downstream 100 bases:
>100_bases CCTGAAAAGGCTGGTTTTTCCAATGTTCACCGACACCTTCGACAAAATAACCTGGCTGCTCCTGGCCGTCGTCATTGCGG CTCTGGCCGGTGTTCTTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MSRFLPLTRYLSDRCGVDFVAVPVDTHDFEKRFKSGEFTFTHTNSLIYVILRENHGVELVASEKRGTFGSRSAGALIARK GSGIETLDHIRGKRLAFGPMLAPTGYLAEYDLMLSAGINPEHDLGTYSIPSGSFKHEKLIYGVLHGKYDVAAAPVLDLET MAQEGKISADDFVILAQSKPIPYCTFAVAKGTDPALVKKVKDALLALKPGDTAEVDGERLKVLKAAWIDGYEDLLDSDYD LIREMAKRVNMPPYQTY
Sequences:
>Translated_257_residues MSRFLPLTRYLSDRCGVDFVAVPVDTHDFEKRFKSGEFTFTHTNSLIYVILRENHGVELVASEKRGTFGSRSAGALIARK GSGIETLDHIRGKRLAFGPMLAPTGYLAEYDLMLSAGINPEHDLGTYSIPSGSFKHEKLIYGVLHGKYDVAAAPVLDLET MAQEGKISADDFVILAQSKPIPYCTFAVAKGTDPALVKKVKDALLALKPGDTAEVDGERLKVLKAAWIDGYEDLLDSDYD LIREMAKRVNMPPYQTY >Mature_256_residues SRFLPLTRYLSDRCGVDFVAVPVDTHDFEKRFKSGEFTFTHTNSLIYVILRENHGVELVASEKRGTFGSRSAGALIARKG SGIETLDHIRGKRLAFGPMLAPTGYLAEYDLMLSAGINPEHDLGTYSIPSGSFKHEKLIYGVLHGKYDVAAAPVLDLETM AQEGKISADDFVILAQSKPIPYCTFAVAKGTDPALVKKVKDALLALKPGDTAEVDGERLKVLKAAWIDGYEDLLDSDYDL IREMAKRVNMPPYQTY
Specific function: Unknown
COG id: COG3221
COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28365; Mature: 28234
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFLPLTRYLSDRCGVDFVAVPVDTHDFEKRFKSGEFTFTHTNSLIYVILRENHGVELV CCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCEEEEECCCEEEEEEECCCCEEEE ASEKRGTFGSRSAGALIARKGSGIETLDHIRGKRLAFGPMLAPTGYLAEYDLMLSAGINP ECCCCCCCCCCCCCEEEEECCCCCHHHHHHCCCEEEECCCCCCCCCCEEEEEEEECCCCC EHDLGTYSIPSGSFKHEKLIYGVLHGKYDVAAAPVLDLETMAQEGKISADDFVILAQSKP CCCCCCEECCCCCCCCHHEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCC IPYCTFAVAKGTDPALVKKVKDALLALKPGDTAEVDGERLKVLKAAWIDGYEDLLDSDYD CCEEEEEEECCCCHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCHH LIREMAKRVNMPPYQTY HHHHHHHHCCCCCCCCC >Mature Secondary Structure SRFLPLTRYLSDRCGVDFVAVPVDTHDFEKRFKSGEFTFTHTNSLIYVILRENHGVELV CCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCEEEEECCCEEEEEEECCCCEEEE ASEKRGTFGSRSAGALIARKGSGIETLDHIRGKRLAFGPMLAPTGYLAEYDLMLSAGINP ECCCCCCCCCCCCCEEEEECCCCCHHHHHHCCCEEEECCCCCCCCCCEEEEEEEECCCCC EHDLGTYSIPSGSFKHEKLIYGVLHGKYDVAAAPVLDLETMAQEGKISADDFVILAQSKP CCCCCCEECCCCCCCCHHEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCC IPYCTFAVAKGTDPALVKKVKDALLALKPGDTAEVDGERLKVLKAAWIDGYEDLLDSDYD CCEEEEEEECCCCHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCHH LIREMAKRVNMPPYQTY HHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA