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The map label for this gene is 39997977

Identifier: 39997977

GI number: 39997977

Start: 3169273

End: 3170544

Strand: Direct

Name: 39997977

Synonym: GSU2886

Alternate gene names: NA

Gene position: 3169273-3170544 (Clockwise)

Preceding gene: 39997972

Following gene: 39997985

Centisome position: 83.09

GC content: 64.07

Gene sequence:

>1272_bases
ATGCCCGGACGCGGATCGGGCCCAACCATTCAAGAAAACACCCGCGATGAGCACCCGGTCATGCAGCCCGCCAGGACCGG
AAAACGACCGGCAGCCAATGACGGCTGCCGGCCACGTCTTCCACTACCTGTGCTCGTCGCAGGCACTGGTGAGGGCGGTG
CAGTTCCCCTCCCCGTAGGAGGTCGGCGACGATGCCTTCCTGAAGTTCGTCATGACCTGCGCCTTCTTGCCGGTGGAATC
GATATAGGCATAGGGCGCGGGGTCGGAGTTGTAGCCGATGAACCGGCCGTGGTTCAGGCCGTGCGGACTCACCGAATGGC
ACGCGACACAGGCCACATTGTTCTCGTGGTCGCTTTCGCTGTGAACGTTGTTGTACCAGCCGCTGGAGCCGCCACTTCCC
TTGAGGGGGTGACACTTGGCGCAGAACAGGGTGGTCTGCCAGTTGCCGGTGTTGTTACGCACGTCTCCCAAGGTCCAGAG
CTTGCCGTCGGAGCGCGCGGGCCAGGTGGTGCCGGTAATCAGCATGGACTTACCGGTCGAGCCGGGGGTGTGACAGTCGC
TGCACTTCATCACCTGGGTGCCGACGGCGGTCCAGGGTGCCTTCATCTGGTTTGCCCGCAGAGCCCGCGGCGCGGCGGAG
CCGGTCTGGCTGTTGAGGGGCACCTGGACCGGGTGGGCCGACGCGTTGGCCGGGTTGAACTCCCGGGCCTTGTCGGTAAA
GGGCTTGCCCGACGGGCCGACGATGGCGCTCACGCCGTTGGTGGCGGAGAACGCATAGGTGGAGTGACACTTATAGCACA
GCTGGTACTCCTTGGTCGCAGGCTGCACGGCCGTGTACCCGGTCGGCGAGGTCCACGCCGCCGTAGCATTCGGCTGGACC
CCGTTGTACTGGCTGAAGTTGGCGACGTAGTCGCCGTGCTTGTCCAGGTGGGACTGGGCGCCGTGGCAATTGGAGCAGGC
ATACTGCTGGCCCGCCACACCGGCGGTGATGGTGTCCATTACATCCTGGTTCGTACTGTTGTGACAGGTCTGGCAGACGG
TGGCCGCAAAGCCGCCGTGTTGCGTGATCAGGTTGTTCTTGTGACAGAAGGAGCAGGTCCCCTGCCCCACCGCGGCCACA
TGCCCCGCCATGGCCGGAACGGCCATGGCGAGCAGTGCTGCGAATGTCATGACTATGCGTTTCATAGGGCTCCTCCATTG
ATCGGTCAGTTGGATGTGGTTCACGTCTCGCCTCCCCGCTACTGCACCAGGAAGGCCCCCTCGGCAACATAG

Upstream 100 bases:

>100_bases
GATATGTTTACCGGATATCAAAATTCAAACAAAAAAGCAACAAGACAACAATTATTGTTGCCTAACCGGCTCTTGGCGTC
TTCATCGGCGAAATCACCGG

Downstream 100 bases:

>100_bases
AGGCTGCTCGAGGTGGTGGTGACACGGAACTTCATCCAGCCGTAGCCGTTCATCCGCTGCGCGATGGAGGTGACGTCGAT
ATCTTTCCAGCCGGCGCTGC

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MPGRGSGPTIQENTRDEHPVMQPARTGKRPAANDGCRPRLPLPVLVAGTGEGGAVPLPVGGRRRCLPEVRHDLRLLAGGI
DIGIGRGVGVVADEPAVVQAVRTHRMARDTGHIVLVVAFAVNVVVPAAGAATSLEGVTLGAEQGGLPVAGVVTHVSQGPE
LAVGARGPGGAGNQHGLTGRAGGVTVAALHHLGADGGPGCLHLVCPQSPRRGGAGLAVEGHLDRVGRRVGRVELPGLVGK
GLARRADDGAHAVGGGERIGGVTLIAQLVLLGRRLHGRVPGRRGPRRRSIRLDPVVLAEVGDVVAVLVQVGLGAVAIGAG
ILLARHTGGDGVHYILVRTVVTGLADGGRKAAVLRDQVVLVTEGAGPLPHRGHMPRHGRNGHGEQCCECHDYAFHRAPPL
IGQLDVVHVSPPRYCTRKAPSAT

Sequences:

>Translated_423_residues
MPGRGSGPTIQENTRDEHPVMQPARTGKRPAANDGCRPRLPLPVLVAGTGEGGAVPLPVGGRRRCLPEVRHDLRLLAGGI
DIGIGRGVGVVADEPAVVQAVRTHRMARDTGHIVLVVAFAVNVVVPAAGAATSLEGVTLGAEQGGLPVAGVVTHVSQGPE
LAVGARGPGGAGNQHGLTGRAGGVTVAALHHLGADGGPGCLHLVCPQSPRRGGAGLAVEGHLDRVGRRVGRVELPGLVGK
GLARRADDGAHAVGGGERIGGVTLIAQLVLLGRRLHGRVPGRRGPRRRSIRLDPVVLAEVGDVVAVLVQVGLGAVAIGAG
ILLARHTGGDGVHYILVRTVVTGLADGGRKAAVLRDQVVLVTEGAGPLPHRGHMPRHGRNGHGEQCCECHDYAFHRAPPL
IGQLDVVHVSPPRYCTRKAPSAT
>Mature_422_residues
PGRGSGPTIQENTRDEHPVMQPARTGKRPAANDGCRPRLPLPVLVAGTGEGGAVPLPVGGRRRCLPEVRHDLRLLAGGID
IGIGRGVGVVADEPAVVQAVRTHRMARDTGHIVLVVAFAVNVVVPAAGAATSLEGVTLGAEQGGLPVAGVVTHVSQGPEL
AVGARGPGGAGNQHGLTGRAGGVTVAALHHLGADGGPGCLHLVCPQSPRRGGAGLAVEGHLDRVGRRVGRVELPGLVGKG
LARRADDGAHAVGGGERIGGVTLIAQLVLLGRRLHGRVPGRRGPRRRSIRLDPVVLAEVGDVVAVLVQVGLGAVAIGAGI
LLARHTGGDGVHYILVRTVVTGLADGGRKAAVLRDQVVLVTEGAGPLPHRGHMPRHGRNGHGEQCCECHDYAFHRAPPLI
GQLDVVHVSPPRYCTRKAPSAT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43212; Mature: 43080

Theoretical pI: Translated: 11.23; Mature: 11.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGRGSGPTIQENTRDEHPVMQPARTGKRPAANDGCRPRLPLPVLVAGTGEGGAVPLPVG
CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCC
GRRRCLPEVRHDLRLLAGGIDIGIGRGVGVVADEPAVVQAVRTHRMARDTGHIVLVVAFA
CCHHHHHHHHHHHHHHHCCCEEECCCCCCEEECCHHHHHHHHHHHHHCCCCCEEEEEEHH
VNVVVPAAGAATSLEGVTLGAEQGGLPVAGVVTHVSQGPELAVGARGPGGAGNQHGLTGR
HHHHCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCC
AGGVTVAALHHLGADGGPGCLHLVCPQSPRRGGAGLAVEGHLDRVGRRVGRVELPGLVGK
CCCEEEEHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEECHHHHHHHHHCCEECCCHHHH
GLARRADDGAHAVGGGERIGGVTLIAQLVLLGRRLHGRVPGRRGPRRRSIRLDPVVLAEV
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHH
GDVVAVLVQVGLGAVAIGAGILLARHTGGDGVHYILVRTVVTGLADGGRKAAVLRDQVVL
HHHHHHHHHHCCCHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECEEEE
VTEGAGPLPHRGHMPRHGRNGHGEQCCECHDYAFHRAPPLIGQLDVVHVSPPRYCTRKAP
EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHCCCC
SAT
CCC
>Mature Secondary Structure 
PGRGSGPTIQENTRDEHPVMQPARTGKRPAANDGCRPRLPLPVLVAGTGEGGAVPLPVG
CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCC
GRRRCLPEVRHDLRLLAGGIDIGIGRGVGVVADEPAVVQAVRTHRMARDTGHIVLVVAFA
CCHHHHHHHHHHHHHHHCCCEEECCCCCCEEECCHHHHHHHHHHHHHCCCCCEEEEEEHH
VNVVVPAAGAATSLEGVTLGAEQGGLPVAGVVTHVSQGPELAVGARGPGGAGNQHGLTGR
HHHHCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCC
AGGVTVAALHHLGADGGPGCLHLVCPQSPRRGGAGLAVEGHLDRVGRRVGRVELPGLVGK
CCCEEEEHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEECHHHHHHHHHCCEECCCHHHH
GLARRADDGAHAVGGGERIGGVTLIAQLVLLGRRLHGRVPGRRGPRRRSIRLDPVVLAEV
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHH
GDVVAVLVQVGLGAVAIGAGILLARHTGGDGVHYILVRTVVTGLADGGRKAAVLRDQVVL
HHHHHHHHHHCCCHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECEEEE
VTEGAGPLPHRGHMPRHGRNGHGEQCCECHDYAFHRAPPLIGQLDVVHVSPPRYCTRKAP
EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHCCCC
SAT
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA