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The map label for this gene is nusG [H]

Identifier: 39997959

GI number: 39997959

Start: 3144778

End: 3145305

Strand: Reverse

Name: nusG [H]

Synonym: GSU2868

Alternate gene names: 39997959

Gene position: 3145305-3144778 (Counterclockwise)

Preceding gene: 39997960

Following gene: 39997958

Centisome position: 82.46

GC content: 54.73

Gene sequence:

>528_bases
ATGTCGAAGAAGTGGTACGGGGTACATACGTACTCCGGATTTGAAAATAAAGTGCGTCTTTCTCTTCAGGAGCGGGTCAA
GAATCTGGGGCTCGAAGAGTTTTTCGGCGAAATACTCATTCCCTCCGAGACCGTTGTCGAGTTGAAGAAGGGCGAGAAGA
AGACGTCGTCGCGCAAGTTTTTCCCGGGTTACATTCTCGTCAACATGGAACTAAACGACGAGACGTGGCATGTGGTCAAG
GAAACCTCGAAGGTCACCGGTTTTGTGGGGGGGAACAATCCCTTCGCGATTCCCGACGAAGAGGTCGCGAAGATCACGCG
GCGCATGGAGGAGGGGGCTGAAAAACCCCGTCCGAAGGTTGAGTTCGAGGTGGGCGAAACCGTCAGGGTCGTGGATGGCC
CGTTCCTCAACTTTGCCGGCGTAGTGGAGGACGTCAAGCCCGACAAAGGGAAGCTGCGGGTCATGGTGAGCATCTTCGGA
CGCGCAACTCCCGTGGAGCTTGAATTCATGCAGGTAGAAAAGCAGTAG

Upstream 100 bases:

>100_bases
TGTCGCGATCGTCCTGCTCATCTCCGTCTATCTCGGCGTCTGCGATGTTGTGCTCGCCAAGCTGATGCGCATCATCCTGG
GGTAAAGGACTCAATCAACT

Downstream 100 bases:

>100_bases
GACGCCGACTCCTGCTGACCAGATACGGAAAACGTCTCGTACGAGAAACAAGGAGTAAGCAATGGCCAAGAAGATTACCG
GTTACATCAAGCTGCAAATC

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MSKKWYGVHTYSGFENKVRLSLQERVKNLGLEEFFGEILIPSETVVELKKGEKKTSSRKFFPGYILVNMELNDETWHVVK
ETSKVTGFVGGNNPFAIPDEEVAKITRRMEEGAEKPRPKVEFEVGETVRVVDGPFLNFAGVVEDVKPDKGKLRVMVSIFG
RATPVELEFMQVEKQ

Sequences:

>Translated_175_residues
MSKKWYGVHTYSGFENKVRLSLQERVKNLGLEEFFGEILIPSETVVELKKGEKKTSSRKFFPGYILVNMELNDETWHVVK
ETSKVTGFVGGNNPFAIPDEEVAKITRRMEEGAEKPRPKVEFEVGETVRVVDGPFLNFAGVVEDVKPDKGKLRVMVSIFG
RATPVELEFMQVEKQ
>Mature_174_residues
SKKWYGVHTYSGFENKVRLSLQERVKNLGLEEFFGEILIPSETVVELKKGEKKTSSRKFFPGYILVNMELNDETWHVVKE
TSKVTGFVGGNNPFAIPDEEVAKITRRMEEGAEKPRPKVEFEVGETVRVVDGPFLNFAGVVEDVKPDKGKLRVMVSIFGR
ATPVELEFMQVEKQ

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=174, Percent_Identity=53.448275862069, Blast_Score=196, Evalue=6e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 19913; Mature: 19782

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKWYGVHTYSGFENKVRLSLQERVKNLGLEEFFGEILIPSETVVELKKGEKKTSSRKF
CCCCEEEEEEECCCCCCEEEEHHHHHHHCCHHHHHCCEECCCHHHHHHHCCCCCCCCCCC
FPGYILVNMELNDETWHVVKETSKVTGFVGGNNPFAIPDEEVAKITRRMEEGAEKPRPKV
CCCEEEEEEEECCCCEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCE
EFEVGETVRVVDGPFLNFAGVVEDVKPDKGKLRVMVSIFGRATPVELEFMQVEKQ
EEECCCEEEEECCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEEEECCC
>Mature Secondary Structure 
SKKWYGVHTYSGFENKVRLSLQERVKNLGLEEFFGEILIPSETVVELKKGEKKTSSRKF
CCCEEEEEEECCCCCCEEEEHHHHHHHCCHHHHHCCEECCCHHHHHHHCCCCCCCCCCC
FPGYILVNMELNDETWHVVKETSKVTGFVGGNNPFAIPDEEVAKITRRMEEGAEKPRPKV
CCCEEEEEEEECCCCEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCE
EFEVGETVRVVDGPFLNFAGVVEDVKPDKGKLRVMVSIFGRATPVELEFMQVEKQ
EEECCCEEEEECCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]