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The map label for this gene is hsc

Identifier: 39997904

GI number: 39997904

Start: 3089715

End: 3091118

Strand: Direct

Name: hsc

Synonym: GSU2811

Alternate gene names: NA

Gene position: 3089715-3091118 (Clockwise)

Preceding gene: 39997903

Following gene: 39997905

Centisome position: 81.01

GC content: 59.97

Gene sequence:

>1404_bases
ATGAAAAAAAGGACGTTGATGCTCACGAGGCTTCTGGCGGGAGGGTGTCTCGGGGTGCTGGCCGGGGTAGCCATGGTTCA
GGCACAGGCGGAAAAGAGTGTGACCAGCTATGCTCCGGTGGCGGTAACGGAAAGTATCTCCTCGGTCATCTCCCGGATGA
AAGCCGCGAAACCGGAGATCATGAAGCGGCAGCAGAATCTGCTGGCAGAGCGCTACGATCTCGGCAACCACCCGGCCAAG
GGCATCACCATGGCCAACGGCAAGGCAGTGCAAGAAGGTGTCCGCGTCAAGCTACCCAAGGGAATGACCTGGGAGAAGCT
GGCCCGGATGAGCCCCGAGGAAATCCGGGACAAGAATTTGTACCCGGCAGGATTTTTCCCCCTCCCCCACCCCAATCATC
CGGAGGGGGGAATGCTGTTTCCCAAGTTCCATATCGATGAGATCAAAAAGCAGGAGGCGCGGGATCTGACCCGGTTCGAC
CTGGACTTTGACCTGCCCGATCATTTCCTGCCCGAATTCCCGGCACCGATCTACCTGACGACCCGCCCCGACCTGGGCGA
TGTGTCGAAAGGGAAACTGGTCACGATCAACAACTACTATGAGCTGTTCAACGGCATCCTGAACCCCAAGCAGCTGGAAG
GGCTGAGACTGCTGGTGACGCCCTTCCCGCAGCAGCAATTCAACCAGACCGAGGATCGGCGCTCGGAGCAGCCGAGCCGG
GGCGTCACCTGCTTTGACTGCCACGCCAACGGGCACAGCAACTCCACAACCCACCTGGTCGGCGATATCAGGCCCCAGGA
ATTCCGGCATCGCCTTGACACCCCGACCCTCAGGGGGGTGAATATCCAGCGGCTGTTCGGTTCGCAGCGGGCGCTGAAGA
GCGTTGAAGACTTCACCGAGTTCGAGCAGCGGGCCGCCTATTTCGACGGTGACCCGGTCATTGCCACCAAAAAAGGGATC
AATATCCTCGACCGGGGCCACCAGGTCCACGCTATGGCGGAATTCATGGCCCTCTTGGACTTCCCGCCGGCCCCCAAGCT
GGGCATAGACGGCAAACTGGATCCGAGAAAGGCCACCGAGTCGGAGATGCGCGGACAGGAGCTGTTCTTCGGCAAGGCCA
AATGCGGGGTTTGCCATCCCGCCCCGTACTATACGGACAACACCATGCACAACCTTCGCGCGGAGCGTTTCTTCAAGCCC
CAGATGATCAACGGCAGAATGGCTTCGGCCGATGGCCCCATCAAGACCTTCCCGCTGCGCGGCATCAAAGATTCGCCCCC
CTACCTGCACGACGGCCGTCTGCTGACCCTGGAAGATACCGTGGAGTTTTTCAATCTGCTCACCGAAACCACCCTGACCG
AGCAGGAAAAGCTTGACCTGGTCGCCTTCATGCGCCAGCTGTGA

Upstream 100 bases:

>100_bases
AATTTCCGATCAGCGCCGGGCAGGGCAGACTTCCGGCCTCCCGCCCGGCGATTCCATGGCAAGTCGATCCATTGGCGCAA
CAGAACACAAGGAGGAACTC

Downstream 100 bases:

>100_bases
GAATCGTCAGAGACAGGCAGGGGAAATACTTCAATGACCGCATCGTACCGTTTTGTTCTCATGACCCTGCTGGCAGGGAT
GTTCGCACTGCCCGCCGCCG

Product: cytochrome C Hsc

Products: NA

Alternate protein names: Cytochrome C Hsc; Cytochrome C; Cytochrome C Peroxidase-Like Protein; Cytochrome C Catalase CCC; Cytochrome

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MKKRTLMLTRLLAGGCLGVLAGVAMVQAQAEKSVTSYAPVAVTESISSVISRMKAAKPEIMKRQQNLLAERYDLGNHPAK
GITMANGKAVQEGVRVKLPKGMTWEKLARMSPEEIRDKNLYPAGFFPLPHPNHPEGGMLFPKFHIDEIKKQEARDLTRFD
LDFDLPDHFLPEFPAPIYLTTRPDLGDVSKGKLVTINNYYELFNGILNPKQLEGLRLLVTPFPQQQFNQTEDRRSEQPSR
GVTCFDCHANGHSNSTTHLVGDIRPQEFRHRLDTPTLRGVNIQRLFGSQRALKSVEDFTEFEQRAAYFDGDPVIATKKGI
NILDRGHQVHAMAEFMALLDFPPAPKLGIDGKLDPRKATESEMRGQELFFGKAKCGVCHPAPYYTDNTMHNLRAERFFKP
QMINGRMASADGPIKTFPLRGIKDSPPYLHDGRLLTLEDTVEFFNLLTETTLTEQEKLDLVAFMRQL

Sequences:

>Translated_467_residues
MKKRTLMLTRLLAGGCLGVLAGVAMVQAQAEKSVTSYAPVAVTESISSVISRMKAAKPEIMKRQQNLLAERYDLGNHPAK
GITMANGKAVQEGVRVKLPKGMTWEKLARMSPEEIRDKNLYPAGFFPLPHPNHPEGGMLFPKFHIDEIKKQEARDLTRFD
LDFDLPDHFLPEFPAPIYLTTRPDLGDVSKGKLVTINNYYELFNGILNPKQLEGLRLLVTPFPQQQFNQTEDRRSEQPSR
GVTCFDCHANGHSNSTTHLVGDIRPQEFRHRLDTPTLRGVNIQRLFGSQRALKSVEDFTEFEQRAAYFDGDPVIATKKGI
NILDRGHQVHAMAEFMALLDFPPAPKLGIDGKLDPRKATESEMRGQELFFGKAKCGVCHPAPYYTDNTMHNLRAERFFKP
QMINGRMASADGPIKTFPLRGIKDSPPYLHDGRLLTLEDTVEFFNLLTETTLTEQEKLDLVAFMRQL
>Mature_467_residues
MKKRTLMLTRLLAGGCLGVLAGVAMVQAQAEKSVTSYAPVAVTESISSVISRMKAAKPEIMKRQQNLLAERYDLGNHPAK
GITMANGKAVQEGVRVKLPKGMTWEKLARMSPEEIRDKNLYPAGFFPLPHPNHPEGGMLFPKFHIDEIKKQEARDLTRFD
LDFDLPDHFLPEFPAPIYLTTRPDLGDVSKGKLVTINNYYELFNGILNPKQLEGLRLLVTPFPQQQFNQTEDRRSEQPSR
GVTCFDCHANGHSNSTTHLVGDIRPQEFRHRLDTPTLRGVNIQRLFGSQRALKSVEDFTEFEQRAAYFDGDPVIATKKGI
NILDRGHQVHAMAEFMALLDFPPAPKLGIDGKLDPRKATESEMRGQELFFGKAKCGVCHPAPYYTDNTMHNLRAERFFKP
QMINGRMASADGPIKTFPLRGIKDSPPYLHDGRLLTLEDTVEFFNLLTETTLTEQEKLDLVAFMRQL

Specific function: Unknown

COG id: COG1858

COG function: function code P; Cytochrome c peroxidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52689; Mature: 52689

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRTLMLTRLLAGGCLGVLAGVAMVQAQAEKSVTSYAPVAVTESISSVISRMKAAKPEI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHH
MKRQQNLLAERYDLGNHPAKGITMANGKAVQEGVRVKLPKGMTWEKLARMSPEEIRDKNL
HHHHHHHHHHHHCCCCCCCCCEEECCCHHHHCCCEEECCCCCCHHHHHCCCHHHHHCCCC
YPAGFFPLPHPNHPEGGMLFPKFHIDEIKKQEARDLTRFDLDFDLPDHFLPEFPAPIYLT
CCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHEECCCCCCCHHHCCCCCCCEEEE
TRPDLGDVSKGKLVTINNYYELFNGILNPKQLEGLRLLVTPFPQQQFNQTEDRRSEQPSR
CCCCCCCCCCCCEEEEHHHHHHHHCCCCHHHHCCEEEEEECCCHHHHCCHHHHHCCCCCC
GVTCFDCHANGHSNSTTHLVGDIRPQEFRHRLDTPTLRGVNIQRLFGSQRALKSVEDFTE
CCEEEEECCCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCHHHHHCHHHHHHHHHHHHH
FEQRAAYFDGDPVIATKKGINILDRGHQVHAMAEFMALLDFPPAPKLGIDGKLDPRKATE
HHHHHHCCCCCCEEEECCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
SEMRGQELFFGKAKCGVCHPAPYYTDNTMHNLRAERFFKPQMINGRMASADGPIKTFPLR
HHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHCCCEEECCCCCEEECCCC
GIKDSPPYLHDGRLLTLEDTVEFFNLLTETTLTEQEKLDLVAFMRQL
CCCCCCCCEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKKRTLMLTRLLAGGCLGVLAGVAMVQAQAEKSVTSYAPVAVTESISSVISRMKAAKPEI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHH
MKRQQNLLAERYDLGNHPAKGITMANGKAVQEGVRVKLPKGMTWEKLARMSPEEIRDKNL
HHHHHHHHHHHHCCCCCCCCCEEECCCHHHHCCCEEECCCCCCHHHHHCCCHHHHHCCCC
YPAGFFPLPHPNHPEGGMLFPKFHIDEIKKQEARDLTRFDLDFDLPDHFLPEFPAPIYLT
CCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHEECCCCCCCHHHCCCCCCCEEEE
TRPDLGDVSKGKLVTINNYYELFNGILNPKQLEGLRLLVTPFPQQQFNQTEDRRSEQPSR
CCCCCCCCCCCCEEEEHHHHHHHHCCCCHHHHCCEEEEEECCCHHHHCCHHHHHCCCCCC
GVTCFDCHANGHSNSTTHLVGDIRPQEFRHRLDTPTLRGVNIQRLFGSQRALKSVEDFTE
CCEEEEECCCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCHHHHHCHHHHHHHHHHHHH
FEQRAAYFDGDPVIATKKGINILDRGHQVHAMAEFMALLDFPPAPKLGIDGKLDPRKATE
HHHHHHCCCCCCEEEECCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
SEMRGQELFFGKAKCGVCHPAPYYTDNTMHNLRAERFFKPQMINGRMASADGPIKTFPLR
HHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHCCCEEECCCCCEEECCCC
GIKDSPPYLHDGRLLTLEDTVEFFNLLTETTLTEQEKLDLVAFMRQL
CCCCCCCCEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA