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The map label for this gene is fdxB [H]

Identifier: 39997897

GI number: 39997897

Start: 3083491

End: 3083754

Strand: Reverse

Name: fdxB [H]

Synonym: GSU2804

Alternate gene names: 39997897

Gene position: 3083754-3083491 (Counterclockwise)

Preceding gene: 39997898

Following gene: 39997896

Centisome position: 80.85

GC content: 56.06

Gene sequence:

>264_bases
ATGGCTTACATCACAGGGCTTAGAAGAAACAAGACGGAATACACCCCCCAGTTCGTCGTCTCCATCGACGAGGAAACCTG
CATCGGCTGTGCCCGCTGCTACAAGGTCTGCGCCCACGACGTGCTCACCTTCGAAGAGGTGGACGAAGACGATTCGGCCA
AGATGTACATGAAAGTGACGAACCCGGACAACTGTATCGGCTGTCAGGCCTGCGGCCGGACCTGCTCGAAGAAGTGCTTC
AGCTTCGCGCCGGTTGAAATGTAA

Upstream 100 bases:

>100_bases
GGTGCGGAAGTGTCGTTCGAGGACAACGAATAGGCTAACCCGCTGCAGCGCACAACGGCGTGATCCTGCGCGATACATCA
CAGGATACGGAGGAAGGACA

Downstream 100 bases:

>100_bases
CCGCCGATCTCCGGAACAGGAGGTACCCATGCTCATCGCGGTGACGTCCAGGGACGGCAGGGAGATCAATCAACATTTCG
GTCATGCCGAGCGTTTCCTC

Product: ferredoxin family protein

Products: NA

Alternate protein names: Ferredoxin III; FdIII [H]

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MAYITGLRRNKTEYTPQFVVSIDEETCIGCARCYKVCAHDVLTFEEVDEDDSAKMYMKVTNPDNCIGCQACGRTCSKKCF
SFAPVEM

Sequences:

>Translated_87_residues
MAYITGLRRNKTEYTPQFVVSIDEETCIGCARCYKVCAHDVLTFEEVDEDDSAKMYMKVTNPDNCIGCQACGRTCSKKCF
SFAPVEM
>Mature_86_residues
AYITGLRRNKTEYTPQFVVSIDEETCIGCARCYKVCAHDVLTFEEVDEDDSAKMYMKVTNPDNCIGCQACGRTCSKKCFS
FAPVEM

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014283
- InterPro:   IPR012285 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 9811; Mature: 9680

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
14.9 %Cys+Met (Translated Protein)
10.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
14.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYITGLRRNKTEYTPQFVVSIDEETCIGCARCYKVCAHDVLTFEEVDEDDSAKMYMKVT
CCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
NPDNCIGCQACGRTCSKKCFSFAPVEM
CCCCEECHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AYITGLRRNKTEYTPQFVVSIDEETCIGCARCYKVCAHDVLTFEEVDEDDSAKMYMKVT
CCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
NPDNCIGCQACGRTCSKKCFSFAPVEM
CCCCEECHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8709854 [H]