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The map label for this gene is 39997842

Identifier: 39997842

GI number: 39997842

Start: 3024100

End: 3024645

Strand: Direct

Name: 39997842

Synonym: GSU2748

Alternate gene names: NA

Gene position: 3024100-3024645 (Clockwise)

Preceding gene: 39997840

Following gene: 39997843

Centisome position: 79.29

GC content: 66.48

Gene sequence:

>546_bases
ATGGAGCCCGCAACCAGGAGGTCCGTCATGCCGGTCTACGAATTCTACTGTGCCGACTGCCATACCATTTTCAACTTCCT
TGCCCGGCGGGTGAACACCACCGCAAGCCCGGCCTGTCCCCGGTGCGGCCGGCCGGGGCTCGACCGCCGGGTATCGCGCT
TCGCCATAACCCGGAACCGGCCGGACGAGCCCCTGGACGGGATGCCCGACCTGGACGATGAACAGTTGGAACGGGCCATG
AGGAGCCTTGCCGGCGAAATGGAGGGGCTGAACGAGGATGATCCGCGCCAGGTGGCCCGCCTCATGCGGAAGCTCCAGGA
GGCCACGGGCATGAACCTGGGCCCGGCATTCGATGAGGCCATGCGGCGCCTGGAGGCGGGCGAAGACCCGGAGGCACTGG
AAGAGGAGATGGGCGATCTCTTCGACGCGGAGAATCCCTTCTCCAGGGAAGGGATCAAGGGGCTGAAGCGGCGGCTTTCC
CCGCCGGAGCACGATGATACCCTCTACCGCCTCCCCGTGGGCGATGAGGAGGCAGGCACCCCATGA

Upstream 100 bases:

>100_bases
TCCAGGCATCGTCCTCTTAGTTAGAGTATACCACCGGATTGGCCATTCTTACCCCCTTGACCTGACGACCGGAAATCATT
AGCCTTCGTGCTGGGCGATC

Downstream 100 bases:

>100_bases
CAGACACCGGTCTGCCGCCCCTTCCCGTCCCGTTCCTGGCACTCATGGAGGAAGTGCTCCCTCCGGACCTGCGCGACGCA
TGCCTGGCCAGCTTCAGCCA

Product: cytochrome C

Products: NA

Alternate protein names: Cytoplasmic Protein; Regulatory Protein FmdB Family; FmdB Family Regulatory Protein

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MEPATRRSVMPVYEFYCADCHTIFNFLARRVNTTASPACPRCGRPGLDRRVSRFAITRNRPDEPLDGMPDLDDEQLERAM
RSLAGEMEGLNEDDPRQVARLMRKLQEATGMNLGPAFDEAMRRLEAGEDPEALEEEMGDLFDAENPFSREGIKGLKRRLS
PPEHDDTLYRLPVGDEEAGTP

Sequences:

>Translated_181_residues
MEPATRRSVMPVYEFYCADCHTIFNFLARRVNTTASPACPRCGRPGLDRRVSRFAITRNRPDEPLDGMPDLDDEQLERAM
RSLAGEMEGLNEDDPRQVARLMRKLQEATGMNLGPAFDEAMRRLEAGEDPEALEEEMGDLFDAENPFSREGIKGLKRRLS
PPEHDDTLYRLPVGDEEAGTP
>Mature_181_residues
MEPATRRSVMPVYEFYCADCHTIFNFLARRVNTTASPACPRCGRPGLDRRVSRFAITRNRPDEPLDGMPDLDDEQLERAM
RSLAGEMEGLNEDDPRQVARLMRKLQEATGMNLGPAFDEAMRRLEAGEDPEALEEEMGDLFDAENPFSREGIKGLKRRLS
PPEHDDTLYRLPVGDEEAGTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20470; Mature: 20470

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPATRRSVMPVYEFYCADCHTIFNFLARRVNTTASPACPRCGRPGLDRRVSRFAITRNR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
PDEPLDGMPDLDDEQLERAMRSLAGEMEGLNEDDPRQVARLMRKLQEATGMNLGPAFDEA
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH
MRRLEAGEDPEALEEEMGDLFDAENPFSREGIKGLKRRLSPPEHDDTLYRLPVGDEEAGT
HHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCC
P
C
>Mature Secondary Structure
MEPATRRSVMPVYEFYCADCHTIFNFLARRVNTTASPACPRCGRPGLDRRVSRFAITRNR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
PDEPLDGMPDLDDEQLERAMRSLAGEMEGLNEDDPRQVARLMRKLQEATGMNLGPAFDEA
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH
MRRLEAGEDPEALEEEMGDLFDAENPFSREGIKGLKRRLSPPEHDDTLYRLPVGDEEAGT
HHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA