Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997767
Identifier: 39997767
GI number: 39997767
Start: 2947883
End: 2949223
Strand: Direct
Name: 39997767
Synonym: GSU2673
Alternate gene names: NA
Gene position: 2947883-2949223 (Clockwise)
Preceding gene: 39997766
Following gene: 39997768
Centisome position: 77.29
GC content: 59.81
Gene sequence:
>1341_bases ATGAACGCAGTACGATTCTTTGTCATTCTGACCATGCTGGCCCTGCTGCCCGCCACCGGTCATGCCAAATGGTGGATCTT CGGGCAGGCGGAGAATGAGATCTCCACCCGCTACCTTTATCTGAACGGCATCTCCTACGACGAGCTGGGTGACAAGGTCA CCATCTACCGGGAGACTCTGGACAACGGCCAGGTGGTCCTGCGGGGCAAGGCCGCCACCAGTTCGTCGGCAGTGGGCTCG GTGCAGGTCAGCACCACCAACAGGGAACGCTGGGAAAAGGCCCGCAAGACCTCCGACGGCAGCTTCGAATATGCCTTCCG CCCTGAAACGGGCGCATCCTACGTGCTCTACGTCAAGATCATCGACACCACCGGCAAGACCAACGACGTGGATGCCACCC GCAAGGAGATCGTCATCTCCGACCGGAACATCTCGGCCCTCATCCGCCAGGCCCTTGATGAGCTGGTTGCGGCCTACCGG GCCGAAGACCCGGCCCGCTTCATGGCCCTTGTCAGCGAGGATTTCGCCGCGGACCCCGCCGTGCTCGACCGGGCCATCCG CCGGGATTTCACCGCTTTCGACAACATCGATCTGAGCTACACCCTGAACAACGTAACCGCCGCCAACGGCAAGATCTACG CCGGCTTCACCTTCAGCCGCAAGTTGACCTCTACCCGGAGCGGCCAGACCCTCTCCGACAAGGGTTCCAGTGAGTTCATC TTCAGCCTCGGGGAAAAGGGGCCGCTGGTGTTCAGCATGAAAAATCCTCTCATCTTCGGCCTCTCCGATGCCTCCAACGT GGCCACGGGCACGGTCAACACCGGCACGAACGAACCGGTGATCGTCGTGACCAGCAGCGGCGACGTTATCACCCAGCCGT TCACCGAGGCCATCACGACCATCGACAATGGCGGCGTGGTGCAAACGACAGCTGATACGGTAGAGGCGGGCAGTTTCACT CTCAGTAACAGTTGCCCCGAGGACTCGTGCATTCAGCCGGGATTCCTCTTCAGTTCACAGGAAGTGACGAACATGTGGAC CGGTGACATCAATCTGGAAATCAACCTCATGTTCATCAAGAGCGGCATCGGAATCCAGAACCTGGGGGCGGTCGGCATCA ATACGGTGACCTCGGCCCCCGCAAGCGGCTATGTCGTTTCAGACGGAACCGGCCTTACCGGCTTCATCGTCGGCGACAAC ATCGGCAACACCTTTGCGTTCCAATTGCTGAACGGCAAGTACGCCCTGCTGGAGGTGGTCTCCTACACCGATCTCGGCGC TGCCAAAACCCGCTCAACCTTCCGATACAAGTACCAACCAGACGGAACCCGCAATTTCTAG
Upstream 100 bases:
>100_bases TCCGTGAAAACGGCACCTACAGGCTCTACAGCCAGAACGGCCCGCCGCTGTTCGGGCTGCACTGAACGAGCAGATACCCT TACCGATTCAGGAGGAATCC
Downstream 100 bases:
>100_bases CGGCACCAGTACCGGAGCCGGCAGGGAACGTCCTGCCGGCTCTTTTTGCAGGAGGAGATCCATGAGAACCCTTATCCGCT GCGTCCTGTTCTGCCTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MNAVRFFVILTMLALLPATGHAKWWIFGQAENEISTRYLYLNGISYDELGDKVTIYRETLDNGQVVLRGKAATSSSAVGS VQVSTTNRERWEKARKTSDGSFEYAFRPETGASYVLYVKIIDTTGKTNDVDATRKEIVISDRNISALIRQALDELVAAYR AEDPARFMALVSEDFAADPAVLDRAIRRDFTAFDNIDLSYTLNNVTAANGKIYAGFTFSRKLTSTRSGQTLSDKGSSEFI FSLGEKGPLVFSMKNPLIFGLSDASNVATGTVNTGTNEPVIVVTSSGDVITQPFTEAITTIDNGGVVQTTADTVEAGSFT LSNSCPEDSCIQPGFLFSSQEVTNMWTGDINLEINLMFIKSGIGIQNLGAVGINTVTSAPASGYVVSDGTGLTGFIVGDN IGNTFAFQLLNGKYALLEVVSYTDLGAAKTRSTFRYKYQPDGTRNF
Sequences:
>Translated_446_residues MNAVRFFVILTMLALLPATGHAKWWIFGQAENEISTRYLYLNGISYDELGDKVTIYRETLDNGQVVLRGKAATSSSAVGS VQVSTTNRERWEKARKTSDGSFEYAFRPETGASYVLYVKIIDTTGKTNDVDATRKEIVISDRNISALIRQALDELVAAYR AEDPARFMALVSEDFAADPAVLDRAIRRDFTAFDNIDLSYTLNNVTAANGKIYAGFTFSRKLTSTRSGQTLSDKGSSEFI FSLGEKGPLVFSMKNPLIFGLSDASNVATGTVNTGTNEPVIVVTSSGDVITQPFTEAITTIDNGGVVQTTADTVEAGSFT LSNSCPEDSCIQPGFLFSSQEVTNMWTGDINLEINLMFIKSGIGIQNLGAVGINTVTSAPASGYVVSDGTGLTGFIVGDN IGNTFAFQLLNGKYALLEVVSYTDLGAAKTRSTFRYKYQPDGTRNF >Mature_446_residues MNAVRFFVILTMLALLPATGHAKWWIFGQAENEISTRYLYLNGISYDELGDKVTIYRETLDNGQVVLRGKAATSSSAVGS VQVSTTNRERWEKARKTSDGSFEYAFRPETGASYVLYVKIIDTTGKTNDVDATRKEIVISDRNISALIRQALDELVAAYR AEDPARFMALVSEDFAADPAVLDRAIRRDFTAFDNIDLSYTLNNVTAANGKIYAGFTFSRKLTSTRSGQTLSDKGSSEFI FSLGEKGPLVFSMKNPLIFGLSDASNVATGTVNTGTNEPVIVVTSSGDVITQPFTEAITTIDNGGVVQTTADTVEAGSFT LSNSCPEDSCIQPGFLFSSQEVTNMWTGDINLEINLMFIKSGIGIQNLGAVGINTVTSAPASGYVVSDGTGLTGFIVGDN IGNTFAFQLLNGKYALLEVVSYTDLGAAKTRSTFRYKYQPDGTRNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48267; Mature: 48267
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAVRFFVILTMLALLPATGHAKWWIFGQAENEISTRYLYLNGISYDELGDKVTIYRETL CCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEEECCCHHHCCCEEEEEEEEC DNGQVVLRGKAATSSSAVGSVQVSTTNRERWEKARKTSDGSFEYAFRPETGASYVLYVKI CCCCEEEEECCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEE IDTTGKTNDVDATRKEIVISDRNISALIRQALDELVAAYRAEDPARFMALVSEDFAADPA EECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHH VLDRAIRRDFTAFDNIDLSYTLNNVTAANGKIYAGFTFSRKLTSTRSGQTLSDKGSSEFI HHHHHHHHCCCHHCCCEEEEEECCEEECCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEE FSLGEKGPLVFSMKNPLIFGLSDASNVATGTVNTGTNEPVIVVTSSGDVITQPFTEAITT EEECCCCCEEEEECCCEEEEECCCCCEEEEEEECCCCCCEEEEECCCCEEECCHHHHHHC IDNGGVVQTTADTVEAGSFTLSNSCPEDSCIQPGFLFSSQEVTNMWTGDINLEINLMFIK CCCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCEEEECCEEEEEEEEEEE SGIGIQNLGAVGINTVTSAPASGYVVSDGTGLTGFIVGDNIGNTFAFQLLNGKYALLEVV CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCEEEEEEECCCEEEEEEE SYTDLGAAKTRSTFRYKYQPDGTRNF HHCCCCCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure MNAVRFFVILTMLALLPATGHAKWWIFGQAENEISTRYLYLNGISYDELGDKVTIYRETL CCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEEECCCHHHCCCEEEEEEEEC DNGQVVLRGKAATSSSAVGSVQVSTTNRERWEKARKTSDGSFEYAFRPETGASYVLYVKI CCCCEEEEECCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEE IDTTGKTNDVDATRKEIVISDRNISALIRQALDELVAAYRAEDPARFMALVSEDFAADPA EECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHH VLDRAIRRDFTAFDNIDLSYTLNNVTAANGKIYAGFTFSRKLTSTRSGQTLSDKGSSEFI HHHHHHHHCCCHHCCCEEEEEECCEEECCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEE FSLGEKGPLVFSMKNPLIFGLSDASNVATGTVNTGTNEPVIVVTSSGDVITQPFTEAITT EEECCCCCEEEEECCCEEEEECCCCCEEEEEEECCCCCCEEEEECCCCEEECCHHHHHHC IDNGGVVQTTADTVEAGSFTLSNSCPEDSCIQPGFLFSSQEVTNMWTGDINLEINLMFIK CCCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCEEEECCEEEEEEEEEEE SGIGIQNLGAVGINTVTSAPASGYVVSDGTGLTGFIVGDNIGNTFAFQLLNGKYALLEVV CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCEEEEEEECCCEEEEEEE SYTDLGAAKTRSTFRYKYQPDGTRNF HHCCCCCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA