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The map label for this gene is bphB [H]

Identifier: 39997763

GI number: 39997763

Start: 2942972

End: 2944003

Strand: Direct

Name: bphB [H]

Synonym: GSU2669

Alternate gene names: 39997763

Gene position: 2942972-2944003 (Clockwise)

Preceding gene: 39997762

Following gene: 39997765

Centisome position: 77.16

GC content: 58.33

Gene sequence:

>1032_bases
ATGACCCCGACGGTTGTATTTGACGTCATTTCCGCAATCGGATTCGCCATTGCGACAGGGGCAATCCTGCGCACCGACCC
GAACGTTCTCGGCAGGTTGCCCAAACTCTTCCTGACCATCTGCATGTCTCTCTATACGCTGGTGGGCCTGTCGAACATCA
TCGAACATGCCGGCATCACCCCTTACCTTGACCGCTACGAAGACTACCTGGAAATCATCTTCATCCCCTTCTTTCTGTTT
TTCGTCTTTTCCGTGCAGAATGAGGAAGAAAGCAGGAGGCGGATTCAGGCGGAACAGGAAACCCGGGCGATCAACGAAAA
CCTCGAACTGCTCATCGCCGAGAGGACGGCGGCGCTCGAGGCGAGCAATCGGGAACTGGAGAGCTTCTGCTATTCGGTCT
CCCACGACCTCCGGGCACCTCTGCGCCATATTGACGGGTACAGCAGGATTCTGCTGGAAGACCTTCAGGGGCGTCTGAAC
GAGGAGGACAGGCTCTATCTGGAGCGGCTTCGTCACTCCACCCTGAAAATGGAGAGCCTGATCGATGACCTTCTGGAATT
GTCGCGGGTGACTCGTGCCGATCTGGACCGCCAAAAGGTCGATCTGAGCCTGATGGCGCGGGAGATTGTGACGGAGCTGG
GCAAAGCGTCACCGGCCCGGGCCATTGAATGGCACATTGACGGCGGCATGTGGGCACAGGGGGATCCCCTGCTGTTGCGG
GTGGCGCTCGTGAACCTCCTCGGCAATGCCTGGAAGTACACGAACAGAACAGCACACGCCATCGTAGAGTTCAGCTCGGT
CAGGGAAAACGACCATCAGACGTTTTTTGTCCGCGATAACGGCGCAGGATTCAGCATGGATTACGCGGACAAGCTCTTCA
TCCCCTTCCAGCGCCTCCACCGGGAGGAAGAGTTCGAGGGGACAGGGGTGGGTCTGGCCACGGTCAAGCGCATCATCGCC
CGCCATGGCGGCCGGATCTGGGCCGAGGGTTCAGTGGACCACGGTGCCACCTTCTATTTCACCCTTCGCTAA

Upstream 100 bases:

>100_bases
ACCTGCTGGAGCACCTTGCCGTTGCCGTGGCCGGGGTAGTTTTCGCCTACGGGTGCCTGCACATATCCAGAAAACAGAGC
TCCGAAGGGAATGGGACGTC

Downstream 100 bases:

>100_bases
CCCTGTCACTTTTTCTTTCATTGCGGGCAGACAGCCGGCCATCCGCGCCGGACGGCCCCCACGCCCCACCCCGGCCTTCC
TTCGCTTACTCCCCTTGGTC

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MTPTVVFDVISAIGFAIATGAILRTDPNVLGRLPKLFLTICMSLYTLVGLSNIIEHAGITPYLDRYEDYLEIIFIPFFLF
FVFSVQNEEESRRRIQAEQETRAINENLELLIAERTAALEASNRELESFCYSVSHDLRAPLRHIDGYSRILLEDLQGRLN
EEDRLYLERLRHSTLKMESLIDDLLELSRVTRADLDRQKVDLSLMAREIVTELGKASPARAIEWHIDGGMWAQGDPLLLR
VALVNLLGNAWKYTNRTAHAIVEFSSVRENDHQTFFVRDNGAGFSMDYADKLFIPFQRLHREEEFEGTGVGLATVKRIIA
RHGGRIWAEGSVDHGATFYFTLR

Sequences:

>Translated_343_residues
MTPTVVFDVISAIGFAIATGAILRTDPNVLGRLPKLFLTICMSLYTLVGLSNIIEHAGITPYLDRYEDYLEIIFIPFFLF
FVFSVQNEEESRRRIQAEQETRAINENLELLIAERTAALEASNRELESFCYSVSHDLRAPLRHIDGYSRILLEDLQGRLN
EEDRLYLERLRHSTLKMESLIDDLLELSRVTRADLDRQKVDLSLMAREIVTELGKASPARAIEWHIDGGMWAQGDPLLLR
VALVNLLGNAWKYTNRTAHAIVEFSSVRENDHQTFFVRDNGAGFSMDYADKLFIPFQRLHREEEFEGTGVGLATVKRIIA
RHGGRIWAEGSVDHGATFYFTLR
>Mature_342_residues
TPTVVFDVISAIGFAIATGAILRTDPNVLGRLPKLFLTICMSLYTLVGLSNIIEHAGITPYLDRYEDYLEIIFIPFFLFF
VFSVQNEEESRRRIQAEQETRAINENLELLIAERTAALEASNRELESFCYSVSHDLRAPLRHIDGYSRILLEDLQGRLNE
EDRLYLERLRHSTLKMESLIDDLLELSRVTRADLDRQKVDLSLMAREIVTELGKASPARAIEWHIDGGMWAQGDPLLLRV
ALVNLLGNAWKYTNRTAHAIVEFSSVRENDHQTFFVRDNGAGFSMDYADKLFIPFQRLHREEEFEGTGVGLATVKRIIAR
HGGRIWAEGSVDHGATFYFTLR

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1786600, Length=239, Percent_Identity=30.9623430962343, Blast_Score=95, Evalue=7e-21,
Organism=Escherichia coli, GI48994928, Length=235, Percent_Identity=28.5106382978723, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1786912, Length=251, Percent_Identity=32.2709163346614, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1789149, Length=245, Percent_Identity=27.7551020408163, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1786783, Length=228, Percent_Identity=30.7017543859649, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1790346, Length=226, Percent_Identity=29.646017699115, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787894, Length=238, Percent_Identity=28.9915966386555, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1789808, Length=193, Percent_Identity=29.0155440414508, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI145693157, Length=243, Percent_Identity=26.7489711934156, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788549, Length=221, Percent_Identity=28.0542986425339, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1790436, Length=220, Percent_Identity=26.3636363636364, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1788713, Length=253, Percent_Identity=25.296442687747, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1790861, Length=211, Percent_Identity=27.4881516587678, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 39194; Mature: 39063

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPTVVFDVISAIGFAIATGAILRTDPNVLGRLPKLFLTICMSLYTLVGLSNIIEHAGIT
CCCHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PYLDRYEDYLEIIFIPFFLFFVFSVQNEEESRRRIQAEQETRAINENLELLIAERTAALE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHH
ASNRELESFCYSVSHDLRAPLRHIDGYSRILLEDLQGRLNEEDRLYLERLRHSTLKMESL
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IDDLLELSRVTRADLDRQKVDLSLMAREIVTELGKASPARAIEWHIDGGMWAQGDPLLLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHH
VALVNLLGNAWKYTNRTAHAIVEFSSVRENDHQTFFVRDNGAGFSMDYADKLFIPFQRLH
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHC
REEEFEGTGVGLATVKRIIARHGGRIWAEGSVDHGATFYFTLR
CHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEC
>Mature Secondary Structure 
TPTVVFDVISAIGFAIATGAILRTDPNVLGRLPKLFLTICMSLYTLVGLSNIIEHAGIT
CCHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PYLDRYEDYLEIIFIPFFLFFVFSVQNEEESRRRIQAEQETRAINENLELLIAERTAALE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHH
ASNRELESFCYSVSHDLRAPLRHIDGYSRILLEDLQGRLNEEDRLYLERLRHSTLKMESL
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IDDLLELSRVTRADLDRQKVDLSLMAREIVTELGKASPARAIEWHIDGGMWAQGDPLLLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHH
VALVNLLGNAWKYTNRTAHAIVEFSSVRENDHQTFFVRDNGAGFSMDYADKLFIPFQRLH
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHC
REEEFEGTGVGLATVKRIIARHGGRIWAEGSVDHGATFYFTLR
CHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]