Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997653
Identifier: 39997653
GI number: 39997653
Start: 2820654
End: 2821469
Strand: Direct
Name: 39997653
Synonym: GSU2558
Alternate gene names: NA
Gene position: 2820654-2821469 (Clockwise)
Preceding gene: 39997652
Following gene: 39997658
Centisome position: 73.95
GC content: 62.25
Gene sequence:
>816_bases ATGACGTCATTCACCGCCTTCGCCCTGCCGGGCGAACTTGACCTGAACCGGCTGGCCGCCGATCTGGGCTTCCCCCGGCG CTACCGGTGGGAAGAGCCCATGGTGCTCGACCAGGCGAGCCTCAAGCCCCTGTCGGGGGACCAGGGCACGACCAAGAGGG TCTACCTCTATTTCTTCGGCGGGGTGGTCTTCGTCAACTGCACGGAGGAGGAGGCAAGGGCCTTTTTCTGGAGCATGGCG CACTACGCGGAGCCGTTCAAGAGCGTGCCGGACGAAAAGTACCGGGATGACTACGCCCTGGCCCTGGGGGAGAGCAGCGG CCCCGCCGTGACCAACGATCTGGCGACCATGCCCGTGTATGATCCGGCCTACGTGGATACCATCTGCTTCGTCATCGCCA AATCAGTGGCCCTGGAGCGGATCGAGGAACGGGTCGACCAGGTCCTGGATGAAATGGAAACCGTCATCGGCATGCTCGAC CGGGGCAAGCTGGGAATCTCGGACCGGCGTCTGGCAAAGCTGGCGGCCAACGTCCTGACCTACAAGTACCAGTCCATCGC CCACGTCATGGTCCTGGAAAAGCCGGAATTCACCTGGGAGAACCCCGAGGCGGACCGCCTCTACCTGACCATGGCCAACG TCTTCGAGCTGAACCAGCGCTACAACGAGATCAAGCACAAGGGGGAAACGCTCCTGGACATCACGGAGGTTTTCACGAGC CTCGCCCACGCCCGCCGCGCCTCCCGCCTTGAATGGACCATCATCATCCTGATCTTCATCGAGATCGTCATCTACCTCTT CGAGCTGGCCCGCTAA
Upstream 100 bases:
>100_bases GGGTGGCGGTTCAGGGCGAGGAATGGAGCGAACCGGGGCCGGCGGCCGGAGAACCGTGATTCCAGGCGTTGATCACCAGA GGAGCATTGGGGAGGGAGCC
Downstream 100 bases:
>100_bases AAGCCGCCCGACAGGGCATACCGCTCCGTCGGGCACCCAGCCGCGGCCGGCAGGGAAAACGGCTTGTGGCATGCCCCGCA GGTGACGGTGCCCGCCGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MTSFTAFALPGELDLNRLAADLGFPRRYRWEEPMVLDQASLKPLSGDQGTTKRVYLYFFGGVVFVNCTEEEARAFFWSMA HYAEPFKSVPDEKYRDDYALALGESSGPAVTNDLATMPVYDPAYVDTICFVIAKSVALERIEERVDQVLDEMETVIGMLD RGKLGISDRRLAKLAANVLTYKYQSIAHVMVLEKPEFTWENPEADRLYLTMANVFELNQRYNEIKHKGETLLDITEVFTS LAHARRASRLEWTIIILIFIEIVIYLFELAR
Sequences:
>Translated_271_residues MTSFTAFALPGELDLNRLAADLGFPRRYRWEEPMVLDQASLKPLSGDQGTTKRVYLYFFGGVVFVNCTEEEARAFFWSMA HYAEPFKSVPDEKYRDDYALALGESSGPAVTNDLATMPVYDPAYVDTICFVIAKSVALERIEERVDQVLDEMETVIGMLD RGKLGISDRRLAKLAANVLTYKYQSIAHVMVLEKPEFTWENPEADRLYLTMANVFELNQRYNEIKHKGETLLDITEVFTS LAHARRASRLEWTIIILIFIEIVIYLFELAR >Mature_270_residues TSFTAFALPGELDLNRLAADLGFPRRYRWEEPMVLDQASLKPLSGDQGTTKRVYLYFFGGVVFVNCTEEEARAFFWSMAH YAEPFKSVPDEKYRDDYALALGESSGPAVTNDLATMPVYDPAYVDTICFVIAKSVALERIEERVDQVLDEMETVIGMLDR GKLGISDRRLAKLAANVLTYKYQSIAHVMVLEKPEFTWENPEADRLYLTMANVFELNQRYNEIKHKGETLLDITEVFTSL AHARRASRLEWTIIILIFIEIVIYLFELAR
Specific function: Unknown
COG id: COG1723
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6320203, Length=246, Percent_Identity=21.9512195121951, Blast_Score=68, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6321163, Length=226, Percent_Identity=22.5663716814159, Blast_Score=62, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31079; Mature: 30948
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSFTAFALPGELDLNRLAADLGFPRRYRWEEPMVLDQASLKPLSGDQGTTKRVYLYFFG CCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEEEC GVVFVNCTEEEARAFFWSMAHYAEPFKSVPDEKYRDDYALALGESSGPAVTNDLATMPVY CEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEEECCCCCCCCCCCCCCCCCC DPAYVDTICFVIAKSVALERIEERVDQVLDEMETVIGMLDRGKLGISDRRLAKLAANVLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH YKYQSIAHVMVLEKPEFTWENPEADRLYLTMANVFELNQRYNEIKHKGETLLDITEVFTS HHHHHHHEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LAHARRASRLEWTIIILIFIEIVIYLFELAR HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TSFTAFALPGELDLNRLAADLGFPRRYRWEEPMVLDQASLKPLSGDQGTTKRVYLYFFG CCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEEEC GVVFVNCTEEEARAFFWSMAHYAEPFKSVPDEKYRDDYALALGESSGPAVTNDLATMPVY CEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEEECCCCCCCCCCCCCCCCCC DPAYVDTICFVIAKSVALERIEERVDQVLDEMETVIGMLDRGKLGISDRRLAKLAANVLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH YKYQSIAHVMVLEKPEFTWENPEADRLYLTMANVFELNQRYNEIKHKGETLLDITEVFTS HHHHHHHEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LAHARRASRLEWTIIILIFIEIVIYLFELAR HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA