Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997554
Identifier: 39997554
GI number: 39997554
Start: 2697470
End: 2697688
Strand: Direct
Name: 39997554
Synonym: GSU2459
Alternate gene names: NA
Gene position: 2697470-2697688 (Clockwise)
Preceding gene: 39997551
Following gene: 39997557
Centisome position: 70.72
GC content: 55.25
Gene sequence:
>219_bases ATGACGGGAAGCAGGAAGCGGAGACGTTTCTTGCGGGGAGGAGGCTCATCGAGCCTCTTGAAGGCATTGCGGGAGTCGTT CTTCCTCGGCGAGAGGAAAGAGGAGGCGGAGAATCGTTTCTTGCTTGTTAAATGTTTAAAATCCTGCATGTATGTTCATT TCGCACGGACATCGCGACCGGCGGCACCGGCCCGGATGCGGGGTCACTTGAATGGATGA
Upstream 100 bases:
>100_bases GCTCAGCTTGCCCGGATGGGCCTCTTCGCGGACGCTGGAAACGGCGGGCCGGCCCGAAAGAAGAAGGGACAGAACCGGGT AGGCGACCAGGAGCGCGGCA
Downstream 100 bases:
>100_bases CGGACTGCCGTCACTATATAGGGAAAAGCCCCGCATTGTCAATGTCGGCGCCCGTTGGCGGGCTGACATGAATCATATTT AATCCACTCCGCCCCCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MTGSRKRRRFLRGGGSSSLLKALRESFFLGERKEEAENRFLLVKCLKSCMYVHFARTSRPAAPARMRGHLNG
Sequences:
>Translated_72_residues MTGSRKRRRFLRGGGSSSLLKALRESFFLGERKEEAENRFLLVKCLKSCMYVHFARTSRPAAPARMRGHLNG >Mature_71_residues TGSRKRRRFLRGGGSSSLLKALRESFFLGERKEEAENRFLLVKCLKSCMYVHFARTSRPAAPARMRGHLNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8229; Mature: 8098
Theoretical pI: Translated: 12.07; Mature: 12.07
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSRKRRRFLRGGGSSSLLKALRESFFLGERKEEAENRFLLVKCLKSCMYVHFARTSRP CCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC AAPARMRGHLNG CCCHHHCCCCCC >Mature Secondary Structure TGSRKRRRFLRGGGSSSLLKALRESFFLGERKEEAENRFLLVKCLKSCMYVHFARTSRP CCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC AAPARMRGHLNG CCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA