Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

Click here to switch to the map view.

The map label for this gene is 39997554

Identifier: 39997554

GI number: 39997554

Start: 2697470

End: 2697688

Strand: Direct

Name: 39997554

Synonym: GSU2459

Alternate gene names: NA

Gene position: 2697470-2697688 (Clockwise)

Preceding gene: 39997551

Following gene: 39997557

Centisome position: 70.72

GC content: 55.25

Gene sequence:

>219_bases
ATGACGGGAAGCAGGAAGCGGAGACGTTTCTTGCGGGGAGGAGGCTCATCGAGCCTCTTGAAGGCATTGCGGGAGTCGTT
CTTCCTCGGCGAGAGGAAAGAGGAGGCGGAGAATCGTTTCTTGCTTGTTAAATGTTTAAAATCCTGCATGTATGTTCATT
TCGCACGGACATCGCGACCGGCGGCACCGGCCCGGATGCGGGGTCACTTGAATGGATGA

Upstream 100 bases:

>100_bases
GCTCAGCTTGCCCGGATGGGCCTCTTCGCGGACGCTGGAAACGGCGGGCCGGCCCGAAAGAAGAAGGGACAGAACCGGGT
AGGCGACCAGGAGCGCGGCA

Downstream 100 bases:

>100_bases
CGGACTGCCGTCACTATATAGGGAAAAGCCCCGCATTGTCAATGTCGGCGCCCGTTGGCGGGCTGACATGAATCATATTT
AATCCACTCCGCCCCCCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MTGSRKRRRFLRGGGSSSLLKALRESFFLGERKEEAENRFLLVKCLKSCMYVHFARTSRPAAPARMRGHLNG

Sequences:

>Translated_72_residues
MTGSRKRRRFLRGGGSSSLLKALRESFFLGERKEEAENRFLLVKCLKSCMYVHFARTSRPAAPARMRGHLNG
>Mature_71_residues
TGSRKRRRFLRGGGSSSLLKALRESFFLGERKEEAENRFLLVKCLKSCMYVHFARTSRPAAPARMRGHLNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8229; Mature: 8098

Theoretical pI: Translated: 12.07; Mature: 12.07

Prosite motif: PS00455 AMP_BINDING

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGSRKRRRFLRGGGSSSLLKALRESFFLGERKEEAENRFLLVKCLKSCMYVHFARTSRP
CCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AAPARMRGHLNG
CCCHHHCCCCCC
>Mature Secondary Structure 
TGSRKRRRFLRGGGSSSLLKALRESFFLGERKEEAENRFLLVKCLKSCMYVHFARTSRP
CCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AAPARMRGHLNG
CCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA