Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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Identifier: 39997514
GI number:
Start: 2652417
End: 2653838
Strand: Direct
Name: Not Available
Synonym: GSU2419
Alternate gene names: NA
Gene position: NA
Preceding gene: 39997513
Following gene: 39997515
Centisome position: NA
GC content: NA
Gene sequence:
>1422_bases ATGAACAAGACCATAACCATTGATCCCGTCACCCGCATCGAGGGGCACGCGCGGGTCTTCATCGACCTGGACGATACGGG TGCGCTCACGGCCGCGGGGCTCGTGGTGAACGAGCTGCGCGGTTTCGAGAAGATCCTGACCGGCATGGACGCGGACCGGA TGCCCCTGGTCACGGCCCGCATCTGCGGGGTCTGCCCCACGGCCCACCACCTGGCCGCCACCAACGCCCTGAACAATGCC GCGGGCGTGGAGCCGCCACCGGCCGCGAAACTGCTGCGCGAGCTCATGTACATGGGGCACGTGATCCACTCCCACTGCCT CTCCCTGTTCGTGCTGCAGGGCCCCGACCTGGTCCTGGGCCTCGACGCCGACCCCGCCGTCCGCAACGTGGTGGGGGTGG TACAGGCAGCCCCGGATATCGCCAAAAAGGCCCTCCAGTGCCGCTCCATCGGCCAGAAGATCAACGAACTGGTCGGCGGG CGGGGCACCCACCCCGTCACCTCGGTAGCCGGCGGAATCGCCTTCGTACTCGACGCCGACCGGGAGCGACAGCTCAACGC CTGGATCAACGAGGCCCGCGACCTTGTGCTGGAGCTGGCGCCCGTGGTGAAGCAGCTCCTGATGAAGATGCTCGACACCC ATCCGGCCATGCTGCAGCAATGGGTTGCCCCGGCCTGGAGCGTCGGCACGGTCAAGGCCGACGGCACCCTGGCCCTGGTG AACGGCGAGATCCGGGCCGTGGATGAGGTCGGCGCCCTGAAGGCCCGGTTCCCCTCGGCCGATTACGATTCGTACATGTC CGAGTCGGCGGTGGAGTTCTCCTACATGAAGCAGGTTTCCTTTGTGGATGGGGACAATCGCCACGACTACCGGGTGGGCC CCCTGGCCCGGCTCAACGTCTCCGAGCGCTACGGCACCCCCCTGGCGGACCGGGAGCGGGAGGAGTTCATCCGGACCGTG GGGCGCCCCTGCCACGCCAATGCGCTCCAACCCTGGGCCCGACTGATCGAGCTCCTCTACTGCACCGAGCGGGCCGGGGA AATCATGGCCGATCCGGCCATCCACGGCGAGACCCGCGTTCCGGTAACCTTCTCCGGTGGCCGGGGCGTGGGGCACGTGG AGGCACCCCGGGGCACCCTGATCCACGACTATGAAATCGACGAGAACGGCATTGTCCGGGCGGCGAACCTGATCGTGGCG ACTCAGCAGAATTACGCCCTGATCAACGCCATGATCGCCCAGGCCGCCACCTCCCACGTCATCAACCGCCCCGACGACCA GGCGCTGCTCAATGCGGTTGAGTTCGGCATCCGCTGCTACGACCCCTGCCTCTCCTGCGCCACCCATGCACTGGGCGCCA TGCCCCTGGAAATCGTCGTGAACCGCGCCGCAAAGCCCCGCGTCATCCGGAGGAACTGCTGA
Upstream 100 bases:
>100_bases ACGGCCAAGACCCACTATTCCTACACCATGGCCACCCCCATGATCGGCGAGAAGCCCACCTTCCTGATCCGGAAATGGAC CGACGAGGAACGAGACGACT
Downstream 100 bases:
>100_bases TGGTCGAGATCAAGGTCCATGAAGAGGCGTGCCGGGGCTGCCGGATGTGCGTCGACATCTGTCCCACCACGGTCTTTGCC TATGACGAGGAAAAGCGGCT
Product: nickel-dependent hydrogenase large subunit
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>473_residues MNKTITIDPVTRIEGHARVFIDLDDTGALTAAGLVVNELRGFEKILTGMDADRMPLVTARICGVCPTAHHLAATNALNNA AGVEPPPAAKLLRELMYMGHVIHSHCLSLFVLQGPDLVLGLDADPAVRNVVGVVQAAPDIAKKALQCRSIGQKINELVGG RGTHPVTSVAGGIAFVLDADRERQLNAWINEARDLVLELAPVVKQLLMKMLDTHPAMLQQWVAPAWSVGTVKADGTLALV NGEIRAVDEVGALKARFPSADYDSYMSESAVEFSYMKQVSFVDGDNRHDYRVGPLARLNVSERYGTPLADREREEFIRTV GRPCHANALQPWARLIELLYCTERAGEIMADPAIHGETRVPVTFSGGRGVGHVEAPRGTLIHDYEIDENGIVRAANLIVA TQQNYALINAMIAQAATSHVINRPDDQALLNAVEFGIRCYDPCLSCATHALGAMPLEIVVNRAAKPRVIRRNC
Sequences:
NA
Specific function: NA
COG id: COG3259
COG function: function code C; Coenzyme F420-reducing hydrogenase, alpha subunit
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA