Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

Click here to switch to the map view.

The map label for this gene is 39997512

Identifier: 39997512

GI number: 39997512

Start: 2650980

End: 2651492

Strand: Direct

Name: 39997512

Synonym: GSU2417

Alternate gene names: NA

Gene position: 2650980-2651492 (Clockwise)

Preceding gene: 39997511

Following gene: 39997513

Centisome position: 69.5

GC content: 63.16

Gene sequence:

>513_bases
ATGTCCGACCTCATGACTACCCGAGCCGCCCTCCAGGAAACCATGACGTTTCTCGGCGCCATCGCCAGCGGCATGGAGGA
GGCCATCGGCGAATCCGCCAACAGCATCACCTATCTGGCCGGCAAGCGGCTCGGCATGCAGTTTTCCGCCGACATCCGGA
AGACCGACGACGTGGAAGAGGCTCTGGCCGCCGTCCGCACGGTGCTCCAGGACAACAACTGCCTCTGGCACTTCGAGCCG
TTCCAGGCCCACGACCGGCCGGCCCTGATCCAGGCCACCGACAAGGGCGACGAGGATATCCACCTGGTCTTCCGGGACTG
CATGATCCGTCAGTCCCTGTTCCGTTTCGGGCACCACCAGAAGGGCTCCCTCTGCACCATGATGTTCGGGTTCTTCTCCG
GCGCGCTCCTGAACGTGATGGGGGTCGATTCGACCCTGGAGATCATGCACGCCGGCGAGAACGCCTGCCTGAAGCGGCTG
GTGATCCACAAGAAAAGGGAGGAGAAACCGTGA

Upstream 100 bases:

>100_bases
CGGGCGTTGCCTCCATGGGAGACCGCCTGATCATCGTGCTCGATATCGAGCGGTTGTTTTCCGAGGATGAACTCACCAAT
CTGACAGGAGTGGCCTGATC

Downstream 100 bases:

>100_bases
GCACCGTCCCGATCAACCTGGAATGGCTCAGCGACTGCTCCGGCTGCCATATCGCCATCGTGGACCTGCACGAAAAGATC
CTGTCGGTCCTGGACTCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MSDLMTTRAALQETMTFLGAIASGMEEAIGESANSITYLAGKRLGMQFSADIRKTDDVEEALAAVRTVLQDNNCLWHFEP
FQAHDRPALIQATDKGDEDIHLVFRDCMIRQSLFRFGHHQKGSLCTMMFGFFSGALLNVMGVDSTLEIMHAGENACLKRL
VIHKKREEKP

Sequences:

>Translated_170_residues
MSDLMTTRAALQETMTFLGAIASGMEEAIGESANSITYLAGKRLGMQFSADIRKTDDVEEALAAVRTVLQDNNCLWHFEP
FQAHDRPALIQATDKGDEDIHLVFRDCMIRQSLFRFGHHQKGSLCTMMFGFFSGALLNVMGVDSTLEIMHAGENACLKRL
VIHKKREEKP
>Mature_169_residues
SDLMTTRAALQETMTFLGAIASGMEEAIGESANSITYLAGKRLGMQFSADIRKTDDVEEALAAVRTVLQDNNCLWHFEPF
QAHDRPALIQATDKGDEDIHLVFRDCMIRQSLFRFGHHQKGSLCTMMFGFFSGALLNVMGVDSTLEIMHAGENACLKRLV
IHKKREEKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19009; Mature: 18878

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLMTTRAALQETMTFLGAIASGMEEAIGESANSITYLAGKRLGMQFSADIRKTDDVEE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCEECCCCCCCCCHHH
ALAAVRTVLQDNNCLWHFEPFQAHDRPALIQATDKGDEDIHLVFRDCMIRQSLFRFGHHQ
HHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC
KGSLCTMMFGFFSGALLNVMGVDSTLEIMHAGENACLKRLVIHKKREEKP
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SDLMTTRAALQETMTFLGAIASGMEEAIGESANSITYLAGKRLGMQFSADIRKTDDVEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCEECCCCCCCCCHHH
ALAAVRTVLQDNNCLWHFEPFQAHDRPALIQATDKGDEDIHLVFRDCMIRQSLFRFGHHQ
HHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC
KGSLCTMMFGFFSGALLNVMGVDSTLEIMHAGENACLKRLVIHKKREEKP
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA