Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997512
Identifier: 39997512
GI number: 39997512
Start: 2650980
End: 2651492
Strand: Direct
Name: 39997512
Synonym: GSU2417
Alternate gene names: NA
Gene position: 2650980-2651492 (Clockwise)
Preceding gene: 39997511
Following gene: 39997513
Centisome position: 69.5
GC content: 63.16
Gene sequence:
>513_bases ATGTCCGACCTCATGACTACCCGAGCCGCCCTCCAGGAAACCATGACGTTTCTCGGCGCCATCGCCAGCGGCATGGAGGA GGCCATCGGCGAATCCGCCAACAGCATCACCTATCTGGCCGGCAAGCGGCTCGGCATGCAGTTTTCCGCCGACATCCGGA AGACCGACGACGTGGAAGAGGCTCTGGCCGCCGTCCGCACGGTGCTCCAGGACAACAACTGCCTCTGGCACTTCGAGCCG TTCCAGGCCCACGACCGGCCGGCCCTGATCCAGGCCACCGACAAGGGCGACGAGGATATCCACCTGGTCTTCCGGGACTG CATGATCCGTCAGTCCCTGTTCCGTTTCGGGCACCACCAGAAGGGCTCCCTCTGCACCATGATGTTCGGGTTCTTCTCCG GCGCGCTCCTGAACGTGATGGGGGTCGATTCGACCCTGGAGATCATGCACGCCGGCGAGAACGCCTGCCTGAAGCGGCTG GTGATCCACAAGAAAAGGGAGGAGAAACCGTGA
Upstream 100 bases:
>100_bases CGGGCGTTGCCTCCATGGGAGACCGCCTGATCATCGTGCTCGATATCGAGCGGTTGTTTTCCGAGGATGAACTCACCAAT CTGACAGGAGTGGCCTGATC
Downstream 100 bases:
>100_bases GCACCGTCCCGATCAACCTGGAATGGCTCAGCGACTGCTCCGGCTGCCATATCGCCATCGTGGACCTGCACGAAAAGATC CTGTCGGTCCTGGACTCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MSDLMTTRAALQETMTFLGAIASGMEEAIGESANSITYLAGKRLGMQFSADIRKTDDVEEALAAVRTVLQDNNCLWHFEP FQAHDRPALIQATDKGDEDIHLVFRDCMIRQSLFRFGHHQKGSLCTMMFGFFSGALLNVMGVDSTLEIMHAGENACLKRL VIHKKREEKP
Sequences:
>Translated_170_residues MSDLMTTRAALQETMTFLGAIASGMEEAIGESANSITYLAGKRLGMQFSADIRKTDDVEEALAAVRTVLQDNNCLWHFEP FQAHDRPALIQATDKGDEDIHLVFRDCMIRQSLFRFGHHQKGSLCTMMFGFFSGALLNVMGVDSTLEIMHAGENACLKRL VIHKKREEKP >Mature_169_residues SDLMTTRAALQETMTFLGAIASGMEEAIGESANSITYLAGKRLGMQFSADIRKTDDVEEALAAVRTVLQDNNCLWHFEPF QAHDRPALIQATDKGDEDIHLVFRDCMIRQSLFRFGHHQKGSLCTMMFGFFSGALLNVMGVDSTLEIMHAGENACLKRLV IHKKREEKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19009; Mature: 18878
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLMTTRAALQETMTFLGAIASGMEEAIGESANSITYLAGKRLGMQFSADIRKTDDVEE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCEECCCCCCCCCHHH ALAAVRTVLQDNNCLWHFEPFQAHDRPALIQATDKGDEDIHLVFRDCMIRQSLFRFGHHQ HHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC KGSLCTMMFGFFSGALLNVMGVDSTLEIMHAGENACLKRLVIHKKREEKP CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SDLMTTRAALQETMTFLGAIASGMEEAIGESANSITYLAGKRLGMQFSADIRKTDDVEE CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCEECCCCCCCCCHHH ALAAVRTVLQDNNCLWHFEPFQAHDRPALIQATDKGDEDIHLVFRDCMIRQSLFRFGHHQ HHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC KGSLCTMMFGFFSGALLNVMGVDSTLEIMHAGENACLKRLVIHKKREEKP CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA