Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is tesA [H]
Identifier: 39997510
GI number: 39997510
Start: 2649504
End: 2650163
Strand: Direct
Name: tesA [H]
Synonym: GSU2415
Alternate gene names: 39997510
Gene position: 2649504-2650163 (Clockwise)
Preceding gene: 39997509
Following gene: 39997511
Centisome position: 69.47
GC content: 67.88
Gene sequence:
>660_bases ATGGCGGTTATTGCGCTGACCGCCCTGGCCGGGTGCGACCGCAAGGAGGCTGCCCGGCCCGCGGCTCCGGCGCAGCAGGA GGCCCGTGCCACGGCAGGGACCATCGTGGCGGTGGGGGACAGCCTCACCGCCGGCTACGGCCTCGACGAACACGATGCCT ACCCGGCCCAACTGGAGCGGCTGCTGCGGGAGGCCGGTCGCCCCTGGCGGGTGGTGAATGCGGGAATCAGCGGCGAGACG AGCAGCGGCGCCCTGTCGCGCGTGAACTGGGTCCTAACCCTGAAGCCGGATATCGTTATCCTGGTCACCGGCGCCAACGA CGGCCTGCGGGGGATCGACCCGAAGGTGACGGAAAAGAATCTCGACGAGATGGTCCGCACGCTGAAGGAGCGCAACGTCA CCGTGGTCCTGGGCGGGATGAAGATGGTCGCGAACCTGGGCCGGGACTACACCCGCGCCTTTGCCGCCGTCTACCCGGCC GTGGCGAAGCGCCACGACCTGATCCTGATTCCCTTTTTCCTGGAAGGGGTTGCAGGGCGCCCCGACCTGAACCAGGCCGA CGGCATCCACCCCACGGCCGAGGGATACCGAATCGTGTCCGATACGGTACTTCCCTACGTGATCAAGGCCATCGAGCAGA CTCCGCCATCTGGCGGCTGA
Upstream 100 bases:
>100_bases AGGAAAAAGCCGGTGGTCTTTCTGCGGGAGCAGGCCGAGGAGTAACGGGGCCGTCGGGACCGGAATACGGAGGTATACCG TGAATCTCAGGAAAAGTCTG
Downstream 100 bases:
>100_bases AATCAAATGGCGTGTCACATTCGACATTAACCATTACTACATATAATTGCAAAGAAAACATCCTCCACACCCCCCATTCG AACCAGCCGAAAATTCGGAC
Product: lipase/acylhydrolase
Products: NA
Alternate protein names: Lecithinase B; Lysophospholipase L1; Protease I [H]
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MAVIALTALAGCDRKEAARPAAPAQQEARATAGTIVAVGDSLTAGYGLDEHDAYPAQLERLLREAGRPWRVVNAGISGET SSGALSRVNWVLTLKPDIVILVTGANDGLRGIDPKVTEKNLDEMVRTLKERNVTVVLGGMKMVANLGRDYTRAFAAVYPA VAKRHDLILIPFFLEGVAGRPDLNQADGIHPTAEGYRIVSDTVLPYVIKAIEQTPPSGG
Sequences:
>Translated_219_residues MAVIALTALAGCDRKEAARPAAPAQQEARATAGTIVAVGDSLTAGYGLDEHDAYPAQLERLLREAGRPWRVVNAGISGET SSGALSRVNWVLTLKPDIVILVTGANDGLRGIDPKVTEKNLDEMVRTLKERNVTVVLGGMKMVANLGRDYTRAFAAVYPA VAKRHDLILIPFFLEGVAGRPDLNQADGIHPTAEGYRIVSDTVLPYVIKAIEQTPPSGG >Mature_218_residues AVIALTALAGCDRKEAARPAAPAQQEARATAGTIVAVGDSLTAGYGLDEHDAYPAQLERLLREAGRPWRVVNAGISGETS SGALSRVNWVLTLKPDIVILVTGANDGLRGIDPKVTEKNLDEMVRTLKERNVTVVLGGMKMVANLGRDYTRAFAAVYPAV AKRHDLILIPFFLEGVAGRPDLNQADGIHPTAEGYRIVSDTVLPYVIKAIEQTPPSGG
Specific function: Hydrolyzes only long chain acyl thioesters (C12-C18). Specificity similar to chymotrypsin [H]
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDSL' lipolytic enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1786702, Length=175, Percent_Identity=39.4285714285714, Blast_Score=128, Evalue=3e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013830 - InterPro: IPR013831 - InterPro: IPR001087 - InterPro: IPR008265 [H]
Pfam domain/function: PF00657 Lipase_GDSL [H]
EC number: =3.1.1.5 [H]
Molecular weight: Translated: 23294; Mature: 23163
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS01098 LIPASE_GDSL_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVIALTALAGCDRKEAARPAAPAQQEARATAGTIVAVGDSLTAGYGLDEHDAYPAQLER CEEEEEEHHHCCCHHHHCCCCCCCHHHHHHHCCEEEEECCCCCCCCCCCCCCCCHHHHHH LLREAGRPWRVVNAGISGETSSGALSRVNWVLTLKPDIVILVTGANDGLRGIDPKVTEKN HHHHCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCHHH LDEMVRTLKERNVTVVLGGMKMVANLGRDYTRAFAAVYPAVAKRHDLILIPFFLEGVAGR HHHHHHHHHHCCEEEEECCHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCC PDLNQADGIHPTAEGYRIVSDTVLPYVIKAIEQTPPSGG CCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AVIALTALAGCDRKEAARPAAPAQQEARATAGTIVAVGDSLTAGYGLDEHDAYPAQLER EEEEEEHHHCCCHHHHCCCCCCCHHHHHHHCCEEEEECCCCCCCCCCCCCCCCHHHHHH LLREAGRPWRVVNAGISGETSSGALSRVNWVLTLKPDIVILVTGANDGLRGIDPKVTEKN HHHHCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCHHH LDEMVRTLKERNVTVVLGGMKMVANLGRDYTRAFAAVYPAVAKRHDLILIPFFLEGVAGR HHHHHHHHHHCCEEEEECCHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCC PDLNQADGIHPTAEGYRIVSDTVLPYVIKAIEQTPPSGG CCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]