Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997507
Identifier: 39997507
GI number: 39997507
Start: 2644995
End: 2646161
Strand: Direct
Name: 39997507
Synonym: GSU2412
Alternate gene names: NA
Gene position: 2644995-2646161 (Clockwise)
Preceding gene: 39997506
Following gene: 39997508
Centisome position: 69.35
GC content: 66.24
Gene sequence:
>1167_bases ATGCGGGAGGAGGAGCGCCAGGTCCGCTTCCGCCTGATCTTCCGCGAACCCGAACGCTTCCCGGCGGGCCAGGACCCTCC GGACGGCCTGCATCGCCTGGTTTTCCTGGAACCGCGCCCCTGCACCGAGGACGAGCTGCGCCGCCTCTCGCCGGCGATCA GCTTCGACCGCGCCATGATCGGGGTAAACCTGAATGCCGACGGAAAGCTGCAGATCTGGGGCGTGGTCCACTCGGGCACC CGCTGGATGCAGGCGGTCCACGGGGGTACCCAATTGATCAACCCGGTGCCTGACTCGCTCATCGTGTTCGTGACCGGGCC GGGACGAATCAGCGTGTCGGTGGGATCGACCATGATCGCCGGCCTGCGGGGCGGCCAAGTGGTCAGCATGGCGCGGGAGG TGTTCGCCGCCTCATGGCTCCGGGAGATATTCGCCACCCACCGGGACGAGTTATGGGACCTGCACCTGGATGCGCGCCAG AAGTCCGGCGACATCTGGCCTCCGATCGACCCGGAATTCCCGGTCATTCTCGGCCAGAACCTGCTCCGCCGGGTTATCAG CCTGATGCGCAGCTATCGCCACGGCGGCACCCTGCTGATCATTCCCAGCGAGCGGACCGATGAGCTGAAACAGGCAAATC CCTACCTGAACATCAAGTATCCGTTTCTGACCGATATCGGCCGGCGGCGGATCTTCCCGCACATCGTCGGGATCATGAAC GAATTCGCCCGGGTAGCCAGCAGGTCGCAGCGGGAGTGCAGGCCCCTGGGGTGGGACGAATACCTGGCCCTCAGCGATCC GGTCCTGACCCGGATGGACGAGGCCCTGTTCGAGCTGGCCCACTTCGTAGCCGATCTCTCCCTGGTGGACGGGGCGGTGG TGCTGAACCGGAGGTTCGAGGTGCTCGGGTTCGGGGCGGAGATTTCCGGCGGGCTGGAGAACGTGACCCGGTTGCACGTG GCCCTGGATATCGAGGGAGAGACCCGGCAACCCGAGGCGGTCAAGGGGCGCGGAACCCGCCACCGGTCGGCCTACCGGCT CTGCAACGCCCTCCACGATGCCCTGGCCATTGTGATCTCCCAGGACGGCCAGGTGCTGTTCGTCCACTGGCATGACGGCG CCGTGACCTGCTGGGACCAGGTGGCCACCAGCCTGCTCGACTTCTGA
Upstream 100 bases:
>100_bases CCGGCAGCTGAAAACCGAGGTCCCGGAGCGGCCCCGGGAGGACTGCCCCGGCTGCTCGATCCTGTCCGTGCTCCTCTCCA CCTGCTACCAGGCGAGCCTG
Downstream 100 bases:
>100_bases TTCATTCAAGCGGGAAGGTTACCCCCGTCACCCGCAGCCCCCCCAAAAGGCGTCCACCCGCGCCGGCGCACCTTTTCCGC CGGCACGGTTGTCCCCCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MREEERQVRFRLIFREPERFPAGQDPPDGLHRLVFLEPRPCTEDELRRLSPAISFDRAMIGVNLNADGKLQIWGVVHSGT RWMQAVHGGTQLINPVPDSLIVFVTGPGRISVSVGSTMIAGLRGGQVVSMAREVFAASWLREIFATHRDELWDLHLDARQ KSGDIWPPIDPEFPVILGQNLLRRVISLMRSYRHGGTLLIIPSERTDELKQANPYLNIKYPFLTDIGRRRIFPHIVGIMN EFARVASRSQRECRPLGWDEYLALSDPVLTRMDEALFELAHFVADLSLVDGAVVLNRRFEVLGFGAEISGGLENVTRLHV ALDIEGETRQPEAVKGRGTRHRSAYRLCNALHDALAIVISQDGQVLFVHWHDGAVTCWDQVATSLLDF
Sequences:
>Translated_388_residues MREEERQVRFRLIFREPERFPAGQDPPDGLHRLVFLEPRPCTEDELRRLSPAISFDRAMIGVNLNADGKLQIWGVVHSGT RWMQAVHGGTQLINPVPDSLIVFVTGPGRISVSVGSTMIAGLRGGQVVSMAREVFAASWLREIFATHRDELWDLHLDARQ KSGDIWPPIDPEFPVILGQNLLRRVISLMRSYRHGGTLLIIPSERTDELKQANPYLNIKYPFLTDIGRRRIFPHIVGIMN EFARVASRSQRECRPLGWDEYLALSDPVLTRMDEALFELAHFVADLSLVDGAVVLNRRFEVLGFGAEISGGLENVTRLHV ALDIEGETRQPEAVKGRGTRHRSAYRLCNALHDALAIVISQDGQVLFVHWHDGAVTCWDQVATSLLDF >Mature_388_residues MREEERQVRFRLIFREPERFPAGQDPPDGLHRLVFLEPRPCTEDELRRLSPAISFDRAMIGVNLNADGKLQIWGVVHSGT RWMQAVHGGTQLINPVPDSLIVFVTGPGRISVSVGSTMIAGLRGGQVVSMAREVFAASWLREIFATHRDELWDLHLDARQ KSGDIWPPIDPEFPVILGQNLLRRVISLMRSYRHGGTLLIIPSERTDELKQANPYLNIKYPFLTDIGRRRIFPHIVGIMN EFARVASRSQRECRPLGWDEYLALSDPVLTRMDEALFELAHFVADLSLVDGAVVLNRRFEVLGFGAEISGGLENVTRLHV ALDIEGETRQPEAVKGRGTRHRSAYRLCNALHDALAIVISQDGQVLFVHWHDGAVTCWDQVATSLLDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43773; Mature: 43773
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREEERQVRFRLIFREPERFPAGQDPPDGLHRLVFLEPRPCTEDELRRLSPAISFDRAMI CCCHHHEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCEEE GVNLNADGKLQIWGVVHSGTRWMQAVHGGTQLINPVPDSLIVFVTGPGRISVSVGSTMIA EEEECCCCEEEEEEEEECCHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEECCHHHH GLRGGQVVSMAREVFAASWLREIFATHRDELWDLHLDARQKSGDIWPPIDPEFPVILGQN CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHH LLRRVISLMRSYRHGGTLLIIPSERTDELKQANPYLNIKYPFLTDIGRRRIFPHIVGIMN HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHH EFARVASRSQRECRPLGWDEYLALSDPVLTRMDEALFELAHFVADLSLVDGAVVLNRRFE HHHHHHHCCHHHCCCCCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEE VLGFGAEISGGLENVTRLHVALDIEGETRQPEAVKGRGTRHRSAYRLCNALHDALAIVIS EEEECCHHCCCHHCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEE QDGQVLFVHWHDGAVTCWDQVATSLLDF CCCCEEEEEECCCCCHHHHHHHHHHHCC >Mature Secondary Structure MREEERQVRFRLIFREPERFPAGQDPPDGLHRLVFLEPRPCTEDELRRLSPAISFDRAMI CCCHHHEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCEEE GVNLNADGKLQIWGVVHSGTRWMQAVHGGTQLINPVPDSLIVFVTGPGRISVSVGSTMIA EEEECCCCEEEEEEEEECCHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEECCHHHH GLRGGQVVSMAREVFAASWLREIFATHRDELWDLHLDARQKSGDIWPPIDPEFPVILGQN CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHH LLRRVISLMRSYRHGGTLLIIPSERTDELKQANPYLNIKYPFLTDIGRRRIFPHIVGIMN HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHH EFARVASRSQRECRPLGWDEYLALSDPVLTRMDEALFELAHFVADLSLVDGAVVLNRRFE HHHHHHHCCHHHCCCCCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEE VLGFGAEISGGLENVTRLHVALDIEGETRQPEAVKGRGTRHRSAYRLCNALHDALAIVIS EEEECCHHCCCHHCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEE QDGQVLFVHWHDGAVTCWDQVATSLLDF CCCCEEEEEECCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA