Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997497
Identifier: 39997497
GI number: 39997497
Start: 2638003
End: 2638584
Strand: Direct
Name: 39997497
Synonym: GSU2402
Alternate gene names: NA
Gene position: 2638003-2638584 (Clockwise)
Preceding gene: 39997496
Following gene: 39997506
Centisome position: 69.16
GC content: 57.04
Gene sequence:
>582_bases ATGAGACTGGTCGTTTCTCTCAGCCCAGCATTCATAATAGCCGCGATGTGCTTCTCGGTCTCTGTTTGCCCAGGGATCCG TGCCGAGGATTCAGCCACCTATGAATGGACGGATGACCAGGGGACGGTTACGTTTTCCGACAATCCGGCGCGCATTCCGG ACAAGCAGAGGAAACGGGTCAAAAAGAGAGCGACCATCGCAGGAGAAGCGTCTCAGGCGGTGATTGAGCAGAAGACCGCC CCCGTCAAAAAGCAGCAGCCGCAGAGGGTGGAAAGCTATGGCGGTCATGGCGAAGGCTGGTGGCGACAACAATTTTCCAC CATCCGGGCGGAGATAGCGCAAACCAGGGCCGACCTGGAAACCAAGCGGCAGAACCTCAAAACCCTCCATTACAAAATGA CCGTAAGCAACGCCACGACCCAGGGCATATTCGGCAATCCCAGGAAAAACCGGAACAATTACCGGGCCGCGCACGATGAT ATCCGCGAGGGCGAAAAACAGCTCGAGGCTCTGGAGCAGAAACTCGTCGACCTGGAAAGTGAGGCGGCACGCCATGGGGT CCCGTTTGAATGGCGCAGATGA
Upstream 100 bases:
>100_bases AAGGCATGGTCGTCAGCCACTTAACGTGGTAACTAATTATGGCAGGTAAAACGAGATGGTGCGTAACCTACCGTCAGAGA TCTTGACAGAGGAGATTCCC
Downstream 100 bases:
>100_bases TGCCGCAAGGGAATGTGTGCCCCTGCCTTCAGGGGGATGCTGTTAACGTGCTGTGTCCAGGAGTGTACGTATGTATCTGA ATAAAGATAACTCCCTGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MRLVVSLSPAFIIAAMCFSVSVCPGIRAEDSATYEWTDDQGTVTFSDNPARIPDKQRKRVKKRATIAGEASQAVIEQKTA PVKKQQPQRVESYGGHGEGWWRQQFSTIRAEIAQTRADLETKRQNLKTLHYKMTVSNATTQGIFGNPRKNRNNYRAAHDD IREGEKQLEALEQKLVDLESEAARHGVPFEWRR
Sequences:
>Translated_193_residues MRLVVSLSPAFIIAAMCFSVSVCPGIRAEDSATYEWTDDQGTVTFSDNPARIPDKQRKRVKKRATIAGEASQAVIEQKTA PVKKQQPQRVESYGGHGEGWWRQQFSTIRAEIAQTRADLETKRQNLKTLHYKMTVSNATTQGIFGNPRKNRNNYRAAHDD IREGEKQLEALEQKLVDLESEAARHGVPFEWRR >Mature_193_residues MRLVVSLSPAFIIAAMCFSVSVCPGIRAEDSATYEWTDDQGTVTFSDNPARIPDKQRKRVKKRATIAGEASQAVIEQKTA PVKKQQPQRVESYGGHGEGWWRQQFSTIRAEIAQTRADLETKRQNLKTLHYKMTVSNATTQGIFGNPRKNRNNYRAAHDD IREGEKQLEALEQKLVDLESEAARHGVPFEWRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21928; Mature: 21928
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLVVSLSPAFIIAAMCFSVSVCPGIRAEDSATYEWTDDQGTVTFSDNPARIPDKQRKRV CEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCHHHHHHH KKRATIAGEASQAVIEQKTAPVKKQQPQRVESYGGHGEGWWRQQFSTIRAEIAQTRADLE HHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH TKRQNLKTLHYKMTVSNATTQGIFGNPRKNRNNYRAAHDDIREGEKQLEALEQKLVDLES HHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EAARHGVPFEWRR HHHHCCCCCCCCC >Mature Secondary Structure MRLVVSLSPAFIIAAMCFSVSVCPGIRAEDSATYEWTDDQGTVTFSDNPARIPDKQRKRV CEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCHHHHHHH KKRATIAGEASQAVIEQKTAPVKKQQPQRVESYGGHGEGWWRQQFSTIRAEIAQTRADLE HHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH TKRQNLKTLHYKMTVSNATTQGIFGNPRKNRNNYRAAHDDIREGEKQLEALEQKLVDLES HHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EAARHGVPFEWRR HHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA