Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997443
Identifier: 39997443
GI number: 39997443
Start: 2566187
End: 2567188
Strand: Direct
Name: 39997443
Synonym: GSU2347
Alternate gene names: NA
Gene position: 2566187-2567188 (Clockwise)
Preceding gene: 39997431
Following gene: 39997444
Centisome position: 67.28
GC content: 61.18
Gene sequence:
>1002_bases ATGACCCGACACCTGACCTGCTCGCTCCTGCTGCTCGGCCTTGCCGCCGCGACGGCCAGGGGCGACGAGATCCGGCTGAA AAACGGAGATCGCCTGAACGGTGAGATAATCCGGATGGAGAAGGACCGCCTCACGGTGAAGCTCCCCTATGCCGACGACA AGGTGCGCATCGACTGGAAACAGGTGGACTGCATCTCCGCAGAGCGCGACCTCACGGTGGAGCTCTCCGACTATGAAGTC CTCGTCGGCCCCGTGACCTGCACCGATGGCGCCATCCGGATAAAAAGCTCCCGGGCCGGGACCACGGCCCCCATCTCCCT CAAGGAACTCCGCACCGTGAATCCGGCCACCTACCACGGCTTTTTGACCGCGGGCGGAAGCATTGCCACGGGCAACACGG ATACCAAGGCCGCAACGCTCTCGACCCTGTTCCAGGTGCGGACGAAACGCCACCGGTTCACCGTGGAGGCCAAGTATGCC TATGGGGAGGCCGACTCGCGAACCACCGTCCGCAACTCCCTCGGCAGCCTCAAGTACGACTTTTTCACCACCGACAAGGT CTACACCTACGCCCAGACCCTGCTGGAAAAGGACTCCTTCGCCAACCTCAATCTGCGGAACACCGAGGGTCTCGGCGTCG GCTACCAGTTCTTCGACGACCGTACCCTCAACCTTTACGCGGAGGCCGGTATCTCCTACTTCAACGAAGATGTGATCGAA GGTGAAGACCGGCAGGATGGCTCGGGGCGCTGGGCGGCGGGTCTCGAATGGGAGGCCGTTCCCGACAGGCTCAAGATATT CCACCGCCAGGAGGGTTACTACACCCCCTCGGTGTCGGGAGTCACGCTCAGGGCTGACCAGGGGGTACGAATTTCCCTCG TCAACGATATTGCGGCCAACCTGGAAGTGGATTATCGTTTCAACAGCAGACCGGAAGCGGGGAAACGCAACTCGGACCTC CTCTTTATCATGGGCCTCACCTATCAGTACGATTACTGGTAG
Upstream 100 bases:
>100_bases CCGGAATCACCGCATTCAGGAGCCGCACCCCCGCCACCCCTTTGCACTGCGGGCTGTTGCCTGTTATTCTTTGTAGTCAA ATCAACTGGAGGAATGCTGA
Downstream 100 bases:
>100_bases GAGCCGACCGAGGGACGCTTCACCCCTCCCGCCACCACCAAGGAGGCGCCATGAAATCCGCTCTGGTTCTCGCCATTGCG CTGGCTGCGCTGATGGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MTRHLTCSLLLLGLAAATARGDEIRLKNGDRLNGEIIRMEKDRLTVKLPYADDKVRIDWKQVDCISAERDLTVELSDYEV LVGPVTCTDGAIRIKSSRAGTTAPISLKELRTVNPATYHGFLTAGGSIATGNTDTKAATLSTLFQVRTKRHRFTVEAKYA YGEADSRTTVRNSLGSLKYDFFTTDKVYTYAQTLLEKDSFANLNLRNTEGLGVGYQFFDDRTLNLYAEAGISYFNEDVIE GEDRQDGSGRWAAGLEWEAVPDRLKIFHRQEGYYTPSVSGVTLRADQGVRISLVNDIAANLEVDYRFNSRPEAGKRNSDL LFIMGLTYQYDYW
Sequences:
>Translated_333_residues MTRHLTCSLLLLGLAAATARGDEIRLKNGDRLNGEIIRMEKDRLTVKLPYADDKVRIDWKQVDCISAERDLTVELSDYEV LVGPVTCTDGAIRIKSSRAGTTAPISLKELRTVNPATYHGFLTAGGSIATGNTDTKAATLSTLFQVRTKRHRFTVEAKYA YGEADSRTTVRNSLGSLKYDFFTTDKVYTYAQTLLEKDSFANLNLRNTEGLGVGYQFFDDRTLNLYAEAGISYFNEDVIE GEDRQDGSGRWAAGLEWEAVPDRLKIFHRQEGYYTPSVSGVTLRADQGVRISLVNDIAANLEVDYRFNSRPEAGKRNSDL LFIMGLTYQYDYW >Mature_332_residues TRHLTCSLLLLGLAAATARGDEIRLKNGDRLNGEIIRMEKDRLTVKLPYADDKVRIDWKQVDCISAERDLTVELSDYEVL VGPVTCTDGAIRIKSSRAGTTAPISLKELRTVNPATYHGFLTAGGSIATGNTDTKAATLSTLFQVRTKRHRFTVEAKYAY GEADSRTTVRNSLGSLKYDFFTTDKVYTYAQTLLEKDSFANLNLRNTEGLGVGYQFFDDRTLNLYAEAGISYFNEDVIEG EDRQDGSGRWAAGLEWEAVPDRLKIFHRQEGYYTPSVSGVTLRADQGVRISLVNDIAANLEVDYRFNSRPEAGKRNSDLL FIMGLTYQYDYW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37373; Mature: 37242
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRHLTCSLLLLGLAAATARGDEIRLKNGDRLNGEIIRMEKDRLTVKLPYADDKVRIDWK CCCEEHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCEEEEEECCCCCEEEEEEE QVDCISAERDLTVELSDYEVLVGPVTCTDGAIRIKSSRAGTTAPISLKELRTVNPATYHG EEEEECCCCCEEEEECCCEEEEEEEEECCCEEEEECCCCCCCCCEEHHHHCCCCCCEEEE FLTAGGSIATGNTDTKAATLSTLFQVRTKRHRFTVEAKYAYGEADSRTTVRNSLGSLKYD EEEECCEEECCCCCCHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCHHHHHHHCCEEEE FFTTDKVYTYAQTLLEKDSFANLNLRNTEGLGVGYQFFDDRTLNLYAEAGISYFNEDVIE EEECCHHHHHHHHHHCCCCCCCCEECCCCCCCCCEEEECCCEEEEEEECCCHHHCHHHCC GEDRQDGSGRWAAGLEWEAVPDRLKIFHRQEGYYTPSVSGVTLRADQGVRISLVNDIAAN CCCCCCCCCCEEECCCCCCCCHHHHEEECCCCEECCCCCCEEEECCCCEEEEEEECCCCC LEVDYRFNSRPEAGKRNSDLLFIMGLTYQYDYW EEEEEEECCCCCCCCCCCCEEEEEEEEEEECCC >Mature Secondary Structure TRHLTCSLLLLGLAAATARGDEIRLKNGDRLNGEIIRMEKDRLTVKLPYADDKVRIDWK CCEEHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCEEEEEECCCCCEEEEEEE QVDCISAERDLTVELSDYEVLVGPVTCTDGAIRIKSSRAGTTAPISLKELRTVNPATYHG EEEEECCCCCEEEEECCCEEEEEEEEECCCEEEEECCCCCCCCCEEHHHHCCCCCCEEEE FLTAGGSIATGNTDTKAATLSTLFQVRTKRHRFTVEAKYAYGEADSRTTVRNSLGSLKYD EEEECCEEECCCCCCHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCHHHHHHHCCEEEE FFTTDKVYTYAQTLLEKDSFANLNLRNTEGLGVGYQFFDDRTLNLYAEAGISYFNEDVIE EEECCHHHHHHHHHHCCCCCCCCEECCCCCCCCCEEEECCCEEEEEEECCCHHHCHHHCC GEDRQDGSGRWAAGLEWEAVPDRLKIFHRQEGYYTPSVSGVTLRADQGVRISLVNDIAAN CCCCCCCCCCEEECCCCCCCCHHHHEEECCCCEECCCCCCEEEECCCCEEEEEEECCCCC LEVDYRFNSRPEAGKRNSDLLFIMGLTYQYDYW EEEEEEECCCCCCCCCCCCEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA