Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997421
Identifier: 39997421
GI number: 39997421
Start: 2541340
End: 2542110
Strand: Direct
Name: 39997421
Synonym: GSU2323
Alternate gene names: NA
Gene position: 2541340-2542110 (Clockwise)
Preceding gene: 39997420
Following gene: 39997422
Centisome position: 66.63
GC content: 66.41
Gene sequence:
>771_bases GTGACGGCGATTCTCCTGACTACCGCCGGATTCGTGCTCGCCTCTATGACCGGCTGGTTCGTTGCTTCCCGGCTGAAGGG GCGCAACGACATCGCCGACGTGGCTTGGGGGCTCGGGTTCATCCTGGCGGCGGCGGTCTCCCTCGTGGCCGGCGGCCACT ACGCCCCCCGGGGCCTCCTGGTCTCCCTCCTGGTGCTGGTCTGGGGGGTGCGGCTCGCCCTTCACATCCACACCCGCAAC CGGGGCAAGGGGGAGGATCCCCGTTACCGGCAGTGGCGGGAGGAGTGGGGGCGCTGGTTCGTGCTCCGCTCGTTCCTCCA GGTATTCATGCTCCAGGGGGTGCTCCTGGTACTGGTGGCGGTGCCGGTGATCTTCGTCAACGGAGCGCCGCCGACACCGC TCGGATGGCTGGACAGCCTGGGCTTTTTCATCTGGCTCACCGGGTTCTTGTTCGAGGCGGTGGGGGACCGGCAACTGCTG CACTTCATCCGCAATCCGGAAAACAAGGGGCAGCTCATGACCGGCGGACTCTGGCGCTACACCCGCCACCCCAACTACTT CGGCGAGGTGACCCTCTGGTGGGGGATATGGCTCATAGCCCTTGCGGTTCCCGGCGGGTGGTGGACCGTCATCGGCCCCC TGGCCATCACGGTGCTGATCCTCAAGGTTTCAGGCATCCCGATGCTGGAAAAACACTACGAGGGACGACCCGACTTCGAG GAGTACAAACGCCGCACGAGCGCCTTCTTCCCCCTGCCGCCCCGGGGGTGA
Upstream 100 bases:
>100_bases CGATGCCGGCTGCCCCCTACCTGGCAGTCTGCCGGGTGGCGGCCCTGAGAATTCGCTCCATCCTGGAGGGTGGAGGGGGG AAGGAAGGAGGGGCAGCATT
Downstream 100 bases:
>100_bases TAAATGTTCCACCGAGAGGAGAAAGCTCCATGAACCTTTACGAACTGTTCCAGCAACCGGGCCTGGGGGTCATGGCCACC GCCGCCCCTGACGGCAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MTAILLTTAGFVLASMTGWFVASRLKGRNDIADVAWGLGFILAAAVSLVAGGHYAPRGLLVSLLVLVWGVRLALHIHTRN RGKGEDPRYRQWREEWGRWFVLRSFLQVFMLQGVLLVLVAVPVIFVNGAPPTPLGWLDSLGFFIWLTGFLFEAVGDRQLL HFIRNPENKGQLMTGGLWRYTRHPNYFGEVTLWWGIWLIALAVPGGWWTVIGPLAITVLILKVSGIPMLEKHYEGRPDFE EYKRRTSAFFPLPPRG
Sequences:
>Translated_256_residues MTAILLTTAGFVLASMTGWFVASRLKGRNDIADVAWGLGFILAAAVSLVAGGHYAPRGLLVSLLVLVWGVRLALHIHTRN RGKGEDPRYRQWREEWGRWFVLRSFLQVFMLQGVLLVLVAVPVIFVNGAPPTPLGWLDSLGFFIWLTGFLFEAVGDRQLL HFIRNPENKGQLMTGGLWRYTRHPNYFGEVTLWWGIWLIALAVPGGWWTVIGPLAITVLILKVSGIPMLEKHYEGRPDFE EYKRRTSAFFPLPPRG >Mature_255_residues TAILLTTAGFVLASMTGWFVASRLKGRNDIADVAWGLGFILAAAVSLVAGGHYAPRGLLVSLLVLVWGVRLALHIHTRNR GKGEDPRYRQWREEWGRWFVLRSFLQVFMLQGVLLVLVAVPVIFVNGAPPTPLGWLDSLGFFIWLTGFLFEAVGDRQLLH FIRNPENKGQLMTGGLWRYTRHPNYFGEVTLWWGIWLIALAVPGGWWTVIGPLAITVLILKVSGIPMLEKHYEGRPDFEE YKRRTSAFFPLPPRG
Specific function: Unknown
COG id: COG3752
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI281365853, Length=254, Percent_Identity=32.6771653543307, Blast_Score=140, Evalue=6e-34, Organism=Drosophila melanogaster, GI28574404, Length=254, Percent_Identity=32.6771653543307, Blast_Score=140, Evalue=6e-34, Organism=Drosophila melanogaster, GI21355723, Length=254, Percent_Identity=32.6771653543307, Blast_Score=140, Evalue=6e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28892; Mature: 28761
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: PS50244 S5A_REDUCTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAILLTTAGFVLASMTGWFVASRLKGRNDIADVAWGLGFILAAAVSLVAGGHYAPRGLL CCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH VSLLVLVWGVRLALHIHTRNRGKGEDPRYRQWREEWGRWFVLRSFLQVFMLQGVLLVLVA HHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPVIFVNGAPPTPLGWLDSLGFFIWLTGFLFEAVGDRQLLHFIRNPENKGQLMTGGLWRY HHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEECCHHHC TRHPNYFGEVTLWWGIWLIALAVPGGWWTVIGPLAITVLILKVSGIPMLEKHYEGRPDFE CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHH EYKRRTSAFFPLPPRG HHHHHHCCCCCCCCCC >Mature Secondary Structure TAILLTTAGFVLASMTGWFVASRLKGRNDIADVAWGLGFILAAAVSLVAGGHYAPRGLL CEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH VSLLVLVWGVRLALHIHTRNRGKGEDPRYRQWREEWGRWFVLRSFLQVFMLQGVLLVLVA HHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPVIFVNGAPPTPLGWLDSLGFFIWLTGFLFEAVGDRQLLHFIRNPENKGQLMTGGLWRY HHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEECCHHHC TRHPNYFGEVTLWWGIWLIALAVPGGWWTVIGPLAITVLILKVSGIPMLEKHYEGRPDFE CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHH EYKRRTSAFFPLPPRG HHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA